AT3G55600 : -
Query Information
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AGICode AT3G55600
Description Membrane fusion protein Use1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G55600 Membrane fusion protein Use1 1 0.32 -0.33
2 AT2G39725 LYR family of Fe/S cluster biogenesis protein 0.82 0.3 -0.32
3 AT3G50900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits
to 45 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.8 0.31 -0.31
4 AT5G59680 Leucine-rich repeat protein kinase family protein -0.8 0.29 -0.3
5 AT4G10140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF2062 (InterPro:IPR018639); BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G33490.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.8 0.32 -0.3
6 AT3G09085 Protein of unknown function (DUF962) 0.8 0.33 -0.33
7 AT2G20850 STRUBBELIG-receptor family 1 STRUBBELIG-receptor family 1 -0.8 0.32 -0.3
8 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 0.79 0.32 -0.33
9 AT2G20000 CDC27 family protein CDC27b, HOBBIT -0.78 0.35 -0.32
10 AT3G61980 serine protease inhibitor, Kazal-type family protein 0.78 0.32 -0.32
11 AT1G05950 unknown protein; Has 50 Blast hits to 45 proteins in 14
species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.77 0.28 -0.31
12 AT2G45150 cytidinediphosphate diacylglycerol synthase 4 cytidinediphosphate diacylglycerol
synthase 4		 -0.77 0.31 -0.36
13 AT4G00340 receptor-like protein kinase 4 receptor-like protein kinase 4 -0.77 0.31 -0.31
14 AT2G47520 Integrase-type DNA-binding superfamily protein Arabidopsis thaliana ethylene
response factor 71, ethylene
response factor 71, HYPOXIA
RESPONSIVE ERF (ETHYLENE RESPONSE
FACTOR) 2		 0.77 0.32 -0.31
15 AT4G13790 SAUR-like auxin-responsive protein family 0.76 0.29 -0.32
16 AT1G64700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.76 0.33 -0.3
17 AT3G06760 Drought-responsive family protein 0.76 0.3 -0.3
18 AT2G30400 ovate family protein 2 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 2, ovate family protein 2		 0.76 0.33 -0.31
19 AT1G25370 Protein of unknown function (DUF1639) 0.76 0.3 -0.31
20 AT3G55140 Pectin lyase-like superfamily protein 0.76 0.3 -0.31
21 AT1G20575 Nucleotide-diphospho-sugar transferases superfamily protein dolichol phosphate mannose
synthase 1		 0.76 0.3 -0.33
22 AT4G01710 ARP2/3 complex 16 kDa subunit (p16-Arc) ARPC5, CROOKED 0.75 0.33 -0.34
23 AT5G62460 RING/FYVE/PHD zinc finger superfamily protein 0.75 0.3 -0.31
24 AT4G32040 KNOTTED1-like homeobox gene 5 KNOTTED1-like homeobox gene 5 0.75 0.33 -0.3
25 AT1G66090 Disease resistance protein (TIR-NBS class) 0.74 0.31 -0.33
26 AT2G45700 sterile alpha motif (SAM) domain-containing protein -0.74 0.34 -0.32
27 AT2G05000 transposable element gene -0.74 0.31 -0.33
28 AT5G58150 Leucine-rich repeat protein kinase family protein -0.74 0.32 -0.34
29 AT2G29890 villin-like 1 ATVLN1, villin 1 -0.73 0.31 -0.33
30 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A 0.73 0.35 -0.32
31 AT5G37070 Protein of unknown function, DUF538 0.73 0.32 -0.32
32 AT5G20090 Uncharacterised protein family (UPF0041) 0.73 0.34 -0.3
33 AT2G15270 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1168 (InterPro:IPR009548); Has 1930
Blast hits to 1364 proteins in 219 species: Archae - 0;
Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96;
Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink).		 0.73 0.32 -0.31
34 AT1G71810 Protein kinase superfamily protein -0.73 0.32 -0.3
35 AT4G32930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF866, eukaryotic (InterPro:IPR008584);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.73 0.29 -0.3
36 AT2G19830 SNF7 family protein SNF7.2, VPS32 0.72 0.3 -0.3
37 AT4G10790 UBX domain-containing protein 0.72 0.32 -0.31
38 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1		 -0.72 0.32 -0.31
39 AT1G55130 Endomembrane protein 70 protein family AtTMN6, transmembrane nine 6 -0.72 0.32 -0.32
40 AT5G01270 carboxyl-terminal domain (ctd) phosphatase-like 2 ATCPL2, carboxyl-terminal domain
(ctd) phosphatase-like 2		 -0.72 0.33 -0.31
41 AT1G31630 AGAMOUS-like 86 AGAMOUS-like 86 0.72 0.3 -0.33
42 AT5G38460 ALG6, ALG8 glycosyltransferase family -0.71 0.32 -0.33
43 AT3G43880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G07526.3); Has 32 Blast hits
to 32 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.3 -0.31
44 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 -0.71 0.32 -0.32
45 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 0.71 0.33 -0.31
46 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 -0.71 0.3 -0.32
47 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.71 0.3 -0.3
48 AT3G02450 cell division protein ftsH, putative -0.71 0.3 -0.32
49 AT4G05060 PapD-like superfamily protein 0.71 0.32 -0.33
50 AT2G27260 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.71 0.31 -0.3
51 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.71 0.32 -0.33
52 AT2G47220 DOMAIN OF UNKNOWN FUNCTION 724 5 DOMAIN OF UNKNOWN FUNCTION 724 5,
DOMAIN OF UNKNOWN FUNCTION 724 5		 -0.71 0.32 -0.33
53 AT4G18530 Protein of unknown function (DUF707) 0.71 0.31 -0.33
54 AT1G30610 pentatricopeptide (PPR) repeat-containing protein EMBRYO DEFECTIVE 2279, EMBRYO
DEFECTIVE 88		 -0.71 0.3 -0.32
55 AT2G41310 response regulator 3 RESPONSE REGULATOR 8, response
regulator 3, response regulator 3		 -0.7 0.3 -0.32
56 AT4G29910 origin recognition complex protein 5 ATORC5, EMBRYO DEFECTIVE 2798,
origin recognition complex protein
5		 -0.7 0.32 -0.32
57 AT5G13000 glucan synthase-like 12 glucan synthase-like 12, callose
synthase 3, gsl12, glucan
synthase-like 12		 -0.7 0.33 -0.3
58 AT5G25540 CTC-interacting domain 6 CTC-interacting domain 6 0.7 0.32 -0.31
59 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 0.7 0.32 -0.31
60 AT5G16050 general regulatory factor 5 GF14 UPSILON, general regulatory
factor 5		 0.7 0.32 -0.32
61 AT3G44740 Class II aaRS and biotin synthetases superfamily protein -0.7 0.31 -0.33
62 AT1G59710 Protein of unknown function (DUF569) 0.7 0.31 -0.33
63 AT4G38780 Pre-mRNA-processing-splicing factor -0.7 0.31 -0.33
64 AT1G19230 Riboflavin synthase-like superfamily protein 0.7 0.31 -0.32
65 AT5G52200 phosphoprotein phosphatase inhibitors AtI-2, inhibitor-2 0.7 0.31 -0.31
66 AT5G53650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.7 0.32 -0.32
67 AT1G73380 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1308 (InterPro:IPR010733); Has 162
Blast hits to 160 proteins in 67 species: Archae - 0;
Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 0.7 0.3 -0.31
68 AT5G40060 Disease resistance protein (NBS-LRR class) family -0.7 0.33 -0.31
69 AT1G61110 NAC domain containing protein 25 NAC domain containing protein 25,
NAC domain containing protein 25		 0.7 0.32 -0.31
70 AT3G13030 hAT transposon superfamily protein -0.7 0.32 -0.3
71 AT3G56610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: embryo, sperm cell,
sepal, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C
globular stage; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF784, Arabidopsis thaliana
(InterPro:IPR008502); Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.7 0.32 -0.29
72 AT4G03480 Ankyrin repeat family protein 0.7 0.31 -0.33
73 AT1G63640 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.7 0.3 -0.31
74 AT1G22290 14-3-3 family protein -0.69 0.29 -0.3
75 AT5G26990 Drought-responsive family protein 0.69 0.3 -0.32
76 AT2G45200 golgi snare 12 ATGOS12, golgi snare 12 0.69 0.31 -0.31
77 AT5G01730 SCAR family protein 4 ATSCAR4, SCAR family protein 4,
WAVE3		 -0.69 0.3 -0.3
78 AT4G29040 regulatory particle AAA-ATPase 2A regulatory particle AAA-ATPase 2A 0.69 0.32 -0.32
79 AT1G14000 VH1-interacting kinase VH1-interacting kinase 0.69 0.32 -0.33
80 AT1G70920 homeobox-leucine zipper protein 18 homeobox-leucine zipper protein
18, homeobox-leucine zipper
protein 18		 0.69 0.3 -0.31
81 AT3G17100 sequence-specific DNA binding transcription factors 0.69 0.32 -0.3
82 AT5G51750 subtilase 1.3 subtilase 1.3, subtilase 1.3 -0.69 0.32 -0.3
83 AT1G66100 Plant thionin 0.69 0.31 -0.3
84 AT4G14970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 6 growth stages; Has 257 Blast hits to 164 proteins
in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189;
Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 -0.69 0.3 -0.31
85 AT5G28050 Cytidine/deoxycytidylate deaminase family protein 0.69 0.31 -0.3
86 AT1G26760 SET domain protein 35 ATXR1, SET domain protein 35 -0.69 0.29 -0.33
87 AT3G23070 CRM family member 3A ATCFM3A, CRM family member 3A -0.69 0.3 -0.29
88 AT4G16120 COBRA-like protein-7 precursor ARABIDOPSIS THALIANA SEC61 BETA 1,
COBRA-like protein-7 precursor,
SEC61 BETA 1		 -0.69 0.33 -0.31
89 AT4G30825 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.3 -0.32
90 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 -0.69 0.31 -0.3
91 AT3G59100 glucan synthase-like 11 glucan synthase-like 11, gsl11,
glucan synthase-like 11		 -0.69 0.32 -0.33
92 AT2G40070 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.69 0.31 -0.33
93 AT1G17460 TRF-like 3 TRF-like 3 -0.69 0.32 -0.32
94 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.28
95 AT5G39660 cycling DOF factor 2 cycling DOF factor 2 0.68 0.3 -0.33
96 AT2G39560 Putative membrane lipoprotein -0.68 0.33 -0.33
97 AT4G16340 guanyl-nucleotide exchange factors;GTPase binding;GTP
binding		 SPIKE1 -0.68 0.31 -0.32
98 AT3G53240 receptor like protein 45 receptor like protein 45, receptor
like protein 45		 -0.68 0.32 -0.31
99 AT3G26950 unknown protein; Has 27 Blast hits to 27 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.34 -0.32
100 AT4G02390 poly(ADP-ribose) polymerase poly(ADP-ribose) polymerase,
ATPARP1, POLY(ADP-RIBOSE)
POLYMERASE 1, poly(ADP-ribose)
polymerase		 -0.68 0.32 -0.32
101 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 0.68 0.33 -0.33
102 AT4G10550 Subtilase family protein -0.68 0.33 -0.35
103 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein -0.68 0.31 -0.32
104 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 0.68 0.31 -0.3
105 AT5G15760 Ribosomal protein PSRP-3/Ycf65 -0.68 0.3 -0.32
106 AT3G46130 myb domain protein 48 myb domain protein 48, ATMYB48-1,
ATMYB48-2, ATMYB48-3, myb domain
protein 48		 -0.68 0.33 -0.32
107 AT1G69330 RING/U-box superfamily protein -0.68 0.29 -0.3
108 AT3G60260 ELMO/CED-12 family protein 0.68 0.3 -0.31
109 AT1G79880 RNA recognition motif (RRM)-containing protein -0.68 0.33 -0.33
110 AT5G61210 soluble N-ethylmaleimide-sensitive factor adaptor protein
33		 ATSNAP33, ATSNAP33B, soluble
N-ethylmaleimide-sensitive factor
adaptor protein 33, SNP33		 0.68 0.31 -0.33
111 AT2G41550 Rho termination factor -0.68 0.31 -0.31
112 AT3G19870 unknown protein; Has 84 Blast hits to 64 proteins in 35
species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 29 (source:
NCBI BLink).		 -0.68 0.33 -0.32
113 AT2G21480 Malectin/receptor-like protein kinase family protein -0.68 0.33 -0.32
114 ATCG00650 ribosomal protein S18 ribosomal protein S18 -0.67 0.31 -0.35
115 AT5G22690 Disease resistance protein (TIR-NBS-LRR class) family 0.67 0.31 -0.32
116 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 -0.67 0.33 -0.33
117 AT2G23940 Protein of unknown function (DUF788) 0.67 0.3 -0.31
118 AT4G29530 Pyridoxal phosphate phosphatase-related protein 0.67 0.3 -0.32
119 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein -0.67 0.32 -0.32
120 AT4G14510 CRM family member 3B ATCFM3B, CRM family member 3B -0.67 0.31 -0.3
121 AT3G54850 plant U-box 14 ATPUB14, plant U-box 14 0.67 0.3 -0.31
122 AT5G30380 transposable element gene -0.67 0.32 -0.32
123 AT5G07710 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.67 0.31 -0.31
124 AT5G43000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.67 0.3 -0.32
125 AT5G59340 WUSCHEL related homeobox 2 WUSCHEL related homeobox 2 -0.67 0.33 -0.31
126 AT1G32950 Subtilase family protein 0.67 0.32 -0.29
127 AT3G10590 Duplicated homeodomain-like superfamily protein 0.67 0.3 -0.34
128 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 0.67 0.32 -0.33
129 AT4G13420 high affinity K+ transporter 5 ARABIDOPSIS THALIANA HIGH AFFINITY
K+ TRANSPORTER 5, high affinity K+
transporter 5		 -0.66 0.33 -0.32
130 AT1G31230 aspartate kinase-homoserine dehydrogenase i ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase i		 -0.66 0.32 -0.31
131 AT5G02410 DIE2/ALG10 family homolog of yeast ALG10 -0.66 0.34 -0.34
132 AT4G35420 dihydroflavonol 4-reductase-like1 dihydroflavonol 4-reductase-like1,
tetraketide alpha-pyrone reductase
1		 -0.66 0.33 -0.29
133 AT1G58300 heme oxygenase 4 heme oxygenase 4 -0.66 0.32 -0.31
134 AT1G66730 DNA LIGASE 6 DNA LIGASE 6, DNA LIGASE 6 -0.66 0.3 -0.31
135 AT1G19060 Protein of unknown function (DUF626) -0.66 0.32 -0.32
136 AT3G14400 ubiquitin-specific protease 25 ubiquitin-specific protease 25 -0.66 0.32 -0.29
137 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.66 0.31 -0.31
138 AT1G06740 transposable element gene -0.66 0.3 -0.3
139 AT1G30350 Pectin lyase-like superfamily protein -0.66 0.33 -0.32
140 AT1G21340 Dof-type zinc finger DNA-binding family protein -0.66 0.34 -0.32
141 AT2G15750 transposable element gene -0.66 0.29 -0.28
142 AT3G03370 BEST Arabidopsis thaliana protein match is: DegP protease 7
(TAIR:AT3G03380.1); Has 55 Blast hits to 55 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.32
143 AT5G03870 Glutaredoxin family protein -0.66 0.32 -0.31
144 AT3G56160 Sodium Bile acid symporter family -0.66 0.31 -0.31