AT3G54890 : photosystem I light harvesting complex gene 1
Query Information
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AGICode AT3G54890
Description photosystem I light harvesting complex gene 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G54890 photosystem I light harvesting complex gene 1 photosystem I light harvesting
complex gene 1		 1 0.29 -0.31
2 AT3G47470 light-harvesting chlorophyll-protein complex I subunit A4 CAB4, light-harvesting
chlorophyll-protein complex I
subunit A4		 0.96 0.3 -0.31
3 AT3G56940 dicarboxylate diiron protein, putative (Crd1) ACSF, CHL27, COPPER RESPONSE
DEFECT 1		 0.96 0.29 -0.31
4 AT1G61520 photosystem I light harvesting complex gene 3 photosystem I light harvesting
complex gene 3		 0.95 0.32 -0.33
5 AT5G54270 light-harvesting chlorophyll B-binding protein 3 light-harvesting chlorophyll
B-binding protein 3, LHCB3*1		 0.95 0.32 -0.31
6 AT1G15820 light harvesting complex photosystem II subunit 6 CP24, light harvesting complex
photosystem II subunit 6		 0.93 0.31 -0.33
7 AT1G52230 photosystem I subunit H2 PHOTOSYSTEM I SUBUNIT H-2,
photosystem I subunit H2, PSI-H		 0.92 0.33 -0.31
8 AT4G09010 ascorbate peroxidase 4 ascorbate peroxidase 4, thylakoid
lumen 29		 0.92 0.33 -0.31
9 AT2G46820 photosystem I P subunit PSAP, photosystem I P subunit,
PLASTID TRANSCRIPTIONALLY ACTIVE
8, THYLAKOID MEMBRANE
PHOSPHOPROTEIN OF 14 KDA		 0.92 0.33 -0.32
10 AT3G54050 high cyclic electron flow 1 high cyclic electron flow 1 0.92 0.33 -0.27
11 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.92 0.3 -0.31
12 AT4G02770 photosystem I subunit D-1 photosystem I subunit D-1 0.92 0.32 -0.31
13 AT3G16000 MAR binding filament-like protein 1 MAR binding filament-like protein
1		 0.92 0.31 -0.31
14 AT3G27690 photosystem II light harvesting complex gene 2.3 LIGHT-HARVESTING CHLOROPHYLL
B-BINDING 2, photosystem II light
harvesting complex gene 2.3,
LHCB2.4		 0.92 0.33 -0.28
15 AT3G08940 light harvesting complex photosystem II light harvesting complex
photosystem II		 0.91 0.3 -0.32
16 AT5G01530 light harvesting complex photosystem II light harvesting complex
photosystem II		 0.91 0.31 -0.3
17 AT4G10340 light harvesting complex of photosystem II 5 light harvesting complex of
photosystem II 5		 0.91 0.31 -0.3
18 AT4G05180 photosystem II subunit Q-2 PHOTOSYSTEM II SUBUNIT Q,
photosystem II subunit Q-2, PSII-Q		 0.91 0.32 -0.31
19 AT3G59400 enzyme binding;tetrapyrrole binding GENOMES UNCOUPLED 4 0.91 0.31 -0.31
20 AT2G42220 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.91 0.31 -0.31
21 AT1G55670 photosystem I subunit G photosystem I subunit G 0.91 0.33 -0.31
22 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast PIGMENT DEFECTIVE 334 0.9 0.3 -0.3
23 AT1G06680 photosystem II subunit P-1 OXYGEN EVOLVING COMPLEX SUBUNIT 23
KDA, OXYGEN-EVOLVING ENHANCER
PROTEIN 2, photosystem II subunit
P-1, PHOTOSYSTEM II SUBUNIT P		 0.9 0.32 -0.33
24 AT1G30380 photosystem I subunit K photosystem I subunit K 0.9 0.32 -0.32
25 AT5G66570 PS II oxygen-evolving complex 1 MANGANESE-STABILIZING PROTEIN 1,
OXYGEN EVOLVING COMPLEX 33
KILODALTON PROTEIN, 33 KDA OXYGEN
EVOLVING POLYPEPTIDE 1, OXYGEN
EVOLVING ENHANCER PROTEIN 33, PS
II OXYGEN-EVOLVING COMPLEX 1, PS
II oxygen-evolving complex 1		 0.9 0.32 -0.31
26 AT2G30570 photosystem II reaction center W photosystem II reaction center W 0.9 0.33 -0.31
27 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.9 0.32 -0.31
28 AT3G02730 thioredoxin F-type 1 ATF1, thioredoxin F-type 1 0.9 0.33 -0.31
29 AT3G50685 unknown protein; Has 52 Blast hits to 46 proteins in 20
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.89 0.31 -0.32
30 AT1G03130 photosystem I subunit D-2 photosystem I subunit D-2 0.89 0.29 -0.31
31 AT5G13630 magnesium-chelatase subunit chlH, chloroplast, putative /
Mg-protoporphyrin IX chelatase, putative (CHLH)		 ABA-BINDING PROTEIN, CONDITIONAL
CHLORINA, CCH1, H SUBUNIT OF
MG-CHELATASE, GENOMES UNCOUPLED 5		 0.89 0.3 -0.3
32 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein translocon at the inner envelope
membrane of chloroplasts 62,
translocon at the inner envelope
membrane of chloroplasts 62		 0.89 0.31 -0.31
33 AT1G03630 protochlorophyllide oxidoreductase C protochlorophyllide oxidoreductase
C, PORC		 0.89 0.32 -0.32
34 AT4G15110 cytochrome P450, family 97, subfamily B, polypeptide 3 cytochrome P450, family 97,
subfamily B, polypeptide 3		 0.89 0.33 -0.32
35 AT3G21055 photosystem II subunit T photosystem II subunit T 0.88 0.32 -0.32
36 AT1G08380 photosystem I subunit O photosystem I subunit O 0.88 0.33 -0.31
37 AT3G50820 photosystem II subunit O-2 OXYGEN EVOLVING COMPLEX SUBUNIT 33
KDA, PHOTOSYSTEM II SUBUNIT O-2,
photosystem II subunit O-2		 0.88 0.32 -0.32
38 AT3G15360 thioredoxin M-type 4 ATHM4, ARABIDOPSIS THIOREDOXIN
M-TYPE 4, thioredoxin M-type 4		 0.88 0.34 -0.31
39 AT1G44446 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ARABIDOPSIS THALIANA CHLOROPHYLL A
OXYGENASE, CHLOROPHYLL A
OXYGENASE, CHLORINA 1		 0.88 0.32 -0.31
40 AT4G21750 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 MERISTEM LAYER 1 0.88 0.31 -0.31
41 AT4G01050 thylakoid rhodanese-like thylakoid rhodanese-like 0.88 0.32 -0.3
42 AT3G17040 high chlorophyll fluorescent 107 high chlorophyll fluorescent 107 0.88 0.3 -0.32
43 AT4G34090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.88 0.3 -0.29
44 AT1G03680 thioredoxin M-type 1 thioredoxin M-type 1, ARABIDOPSIS
THIOREDOXIN M-TYPE 1, thioredoxin
M-type 1, THIOREDOXIN M-TYPE 1		 0.88 0.33 -0.32
45 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.87 0.32 -0.32
46 AT1G51080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 11 growth stages; Has 101 Blast hits to 98 proteins
in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38;
Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 0.87 0.33 -0.3
47 AT5G55230 microtubule-associated proteins 65-1 microtubule-associated proteins
65-1, MAP65-1,
microtubule-associated proteins
65-1		 0.87 0.3 -0.32
48 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.87 0.31 -0.33
49 AT5G14260 Rubisco methyltransferase family protein 0.86 0.33 -0.32
50 AT3G03710 polyribonucleotide nucleotidyltransferase, putative PIGMENT DEFECTIVE 326,
POLYNUCLEOTIDE PHOSPHORYLASE,
resistant to inhibition with FSM
10		 0.86 0.32 -0.3
51 AT1G74880 NAD(P)H:plastoquinone dehydrogenase complex subunit O NAD(P)H:plastoquinone
dehydrogenase complex subunit O,
NADH dehydrogenase-like complex )		 0.86 0.3 -0.32
52 AT2G26910 pleiotropic drug resistance 4 ATP-binding cassette G32,
PLEIOTROPIC DRUG RESISTANCE 4,
pleiotropic drug resistance 4,
PERMEABLE CUTICLE 1		 0.86 0.3 -0.32
53 AT1G60800 NSP-interacting kinase 3 NSP-interacting kinase 3 0.86 0.33 -0.3
54 AT1G31920 Tetratricopeptide repeat (TPR)-like superfamily protein 0.86 0.33 -0.32
55 AT1G21500 unknown protein; Has 29 Blast hits to 29 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.86 0.3 -0.31
56 AT3G18050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G28100.1); Has 67 Blast hits
to 66 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.86 0.33 -0.31
57 AT1G54780 thylakoid lumen 18.3 kDa protein AtTLP18.3, thylakoid lumen protein
18.3		 0.86 0.34 -0.33
58 AT1G27120 Galactosyltransferase family protein 0.86 0.32 -0.33
59 AT5G64040 photosystem I reaction center subunit PSI-N, chloroplast,
putative / PSI-N, putative (PSAN)		 PSAN 0.86 0.33 -0.33
60 AT4G12800 photosystem I subunit l photosystem I subunit l 0.86 0.3 -0.32
61 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.85 0.32 -0.3
62 AT1G15260 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits
to 28 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.85 0.33 -0.33
63 AT4G27440 protochlorophyllide oxidoreductase B protochlorophyllide oxidoreductase
B		 0.85 0.35 -0.32
64 AT1G79040 photosystem II subunit R photosystem II subunit R 0.85 0.3 -0.31
65 AT1G17920 homeodomain GLABROUS 12 homeodomain GLABROUS 12 0.85 0.3 -0.3
66 AT1G73870 B-box type zinc finger protein with CCT domain 0.85 0.31 -0.32
67 AT5G01240 like AUXIN RESISTANT 1 like AUXIN RESISTANT 1 0.85 0.33 -0.35
68 AT3G63140 chloroplast stem-loop binding protein of 41 kDa chloroplast stem-loop binding
protein of 41 kDa		 0.85 0.31 -0.3
69 AT1G60990 Glycine cleavage T-protein family 0.85 0.31 -0.31
70 AT5G15310 myb domain protein 16 ATMIXTA, myb domain protein 16,
myb domain protein 16		 0.85 0.31 -0.32
71 AT2G36050 ovate family protein 15 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 15, ovate family protein
15		 0.85 0.32 -0.32
72 AT5G48490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.84 0.31 -0.33
73 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.84 0.32 -0.32
74 AT3G59060 phytochrome interacting factor 3-like 6 PHYTOCHROME-INTERACTING FACTOR 5,
phytochrome interacting factor
3-like 6		 0.84 0.33 -0.32
75 AT5G43750 NAD(P)H dehydrogenase 18 NAD(P)H dehydrogenase 18,
Photosynthetic NDH subcomplex B 5		 0.84 0.31 -0.3
76 AT4G39330 cinnamyl alcohol dehydrogenase 9 ATCAD9, cinnamyl alcohol
dehydrogenase 9		 0.84 0.3 -0.33
77 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in
59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi -
0; Plants - 134; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 0.84 0.35 -0.31
78 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.84 0.3 -0.31
79 AT5G19940 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.84 0.29 -0.3
80 AT4G34220 Leucine-rich repeat protein kinase family protein 0.84 0.32 -0.31
81 AT2G13440 glucose-inhibited division family A protein 0.84 0.33 -0.32
82 AT1G70760 inorganic carbon transport protein-related CHLORORESPIRATORY REDUCTION 23,
NADH dehydrogenase-like complex L		 0.84 0.29 -0.32
83 AT1G31330 photosystem I subunit F photosystem I subunit F 0.84 0.3 -0.32
84 AT4G33010 glycine decarboxylase P-protein 1 glycine decarboxylase P-protein 1,
glycine decarboxylase P-protein 1		 0.84 0.32 -0.32
85 AT1G12860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 INDUCER OF CBF EXPRESSION 2,
SCREAM 2		 0.84 0.31 -0.33
86 AT3G14990 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog A, DJ-1 homolog A -0.83 0.28 -0.35
87 AT4G23885 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.82 0.3 -0.32
88 AT3G28850 Glutaredoxin family protein -0.82 0.33 -0.33
89 AT5G10820 Major facilitator superfamily protein -0.8 0.3 -0.33
90 AT1G32690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast
hits to 45 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.8 0.32 -0.31
91 AT1G09300 Metallopeptidase M24 family protein -0.8 0.32 -0.32
92 AT1G04980 PDI-like 2-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 10, PDI-like
2-2, PROTEIN DISULFIDE ISOMERASE,
PDI-like 2-2		 -0.79 0.32 -0.32
93 AT3G09270 glutathione S-transferase TAU 8 glutathione S-transferase TAU 8,
glutathione S-transferase TAU 8		 -0.79 0.33 -0.34
94 AT1G24050 RNA-processing, Lsm domain -0.79 0.32 -0.31
95 AT5G12880 proline-rich family protein -0.79 0.32 -0.33
96 AT1G10140 Uncharacterised conserved protein UCP031279 -0.79 0.33 -0.34
97 AT5G50760 SAUR-like auxin-responsive protein family -0.79 0.3 -0.32
98 AT4G19880 Glutathione S-transferase family protein -0.78 0.33 -0.31
99 AT1G14330 Galactose oxidase/kelch repeat superfamily protein -0.77 0.31 -0.32
100 AT1G60420 DC1 domain-containing protein -0.77 0.31 -0.32
101 AT5G57300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.76 0.31 -0.32
102 AT1G15670 Galactose oxidase/kelch repeat superfamily protein -0.76 0.32 -0.31
103 AT3G06860 multifunctional protein 2 MULTIFUNCTIONAL PROTEIN 2,
multifunctional protein 2		 -0.75 0.31 -0.32
104 AT1G34370 C2H2 and C2HC zinc fingers superfamily protein sensitive to proton rhizotoxicity
1		 -0.75 0.3 -0.31
105 AT5G18310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48500.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.75 0.32 -0.3
106 AT1G72470 exocyst subunit exo70 family protein D1 exocyst subunit exo70 family
protein D1, exocyst subunit exo70
family protein D1		 -0.75 0.32 -0.3
107 AT2G29500 HSP20-like chaperones superfamily protein -0.74 0.31 -0.3
108 AT2G25110 stromal cell-derived factor 2-like protein precursor Arabidopsis thaliana STROMAL
CELL-DERIVED FACTOR 2-like protein
precursor, ATSDF2-LIKE, stromal
cell-derived factor 2-like protein
precursor		 -0.74 0.31 -0.32
109 AT2G27450 nitrilase-like protein 1 ATNLP1, CPA, nitrilase-like
protein 1		 -0.74 0.31 -0.31
110 AT1G06180 myb domain protein 13 myb domain protein 13, ATMYBLFGN,
myb domain protein 13		 -0.74 0.32 -0.34
111 AT3G57380 Glycosyltransferase family 61 protein -0.74 0.31 -0.31
112 AT1G08315 ARM repeat superfamily protein -0.74 0.29 -0.31
113 AT2G43080 P4H isoform 1 P4H isoform 1 -0.73 0.32 -0.31
114 AT3G26470 Powdery mildew resistance protein, RPW8 domain -0.73 0.33 -0.3
115 AT1G44170 aldehyde dehydrogenase 3H1 aldehyde dehydrogenase 3H1,
aldehyde dehydrogenase 4		 -0.73 0.31 -0.31
116 AT1G30040 gibberellin 2-oxidase gibberellin 2-oxidase, gibberellin
2-oxidase, GIBBERELLIN 2-OXIDASE 2		 -0.73 0.35 -0.31
117 AT4G25810 xyloglucan endotransglycosylase 6 xyloglucan
endotransglucosylase/hydrolase 23,
xyloglucan endotransglycosylase 6		 -0.72 0.32 -0.32
118 AT3G07760 Sterile alpha motif (SAM) domain-containing protein -0.72 0.31 -0.32
119 AT4G23010 UDP-galactose transporter 2 ATUTR2, UDP-galactose transporter
2		 -0.72 0.31 -0.3
120 AT2G37110 PLAC8 family protein -0.71 0.31 -0.33
121 AT5G52510 SCARECROW-like 8 SCARECROW-like 8 -0.71 0.3 -0.34
122 AT1G74240 Mitochondrial substrate carrier family protein -0.71 0.29 -0.32
123 AT1G22360 UDP-glucosyl transferase 85A2 UDP-glucosyl transferase 85A2,
UDP-glucosyl transferase 85A2		 -0.71 0.33 -0.31