AT3G54860 : ATVPS33
Query Information
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AGICode AT3G54860
Description Sec1/munc18-like (SM) proteins superfamily
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G54860 Sec1/munc18-like (SM) proteins superfamily ATVPS33, VACUOLAR PROTEIN SORTING
33		 1 0.3 -0.31
2 AT2G46580 Pyridoxamine 5'-phosphate oxidase family protein 0.79 0.31 -0.32
3 AT1G76080 chloroplastic drought-induced stress protein of 32 kD ARABIDOPSIS THALIANA CHLOROPLASTIC
DROUGHT-INDUCED STRESS PROTEIN OF
32 KD, chloroplastic
drought-induced stress protein of
32 kD		 0.75 0.32 -0.31
4 AT3G09150 phytochromobilin:ferredoxin oxidoreductase, chloroplast /
phytochromobilin synthase (HY2)		 ARABIDOPSIS ELONGATED HYPOCOTYL 2,
GENOMES UNCOUPLED 3, ELONGATED
HYPOCOTYL 2		 0.75 0.3 -0.31
5 AT1G31170 sulfiredoxin SULFIREDOXIN, sulfiredoxin 0.74 0.34 -0.31
6 AT5G19590 Protein of unknown function, DUF538 0.74 0.3 -0.32
7 AT5G03420 5'-AMP-activated protein kinase-related 0.74 0.32 -0.33
8 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.73 0.31 -0.32
9 AT2G26540 uroporphyrinogen-III synthase family protein DOMAIN OF UNKNOWN FUNCTION 724 3,
ARABIDOPSIS THALIANA
UROPORPHYRINOGEN III SYNTHASE,
DOMAIN OF UNKNOWN FUNCTION 724 3,
HEMD, UROPORPHYRINOGEN III
SYNTHASE		 0.73 0.32 -0.31
10 AT5G06130 chaperone protein dnaJ-related 0.73 0.32 -0.31
11 AT1G55000 peptidoglycan-binding LysM domain-containing protein 0.73 0.32 -0.3
12 AT4G33460 ABC transporter family protein ATP-binding cassette I10, ATNAP13,
embryo defective 2751		 0.72 0.34 -0.33
13 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).		 0.72 0.33 -0.31
14 AT4G02120 CTP synthase family protein 0.72 0.32 -0.31
15 AT5G07730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.72 0.31 -0.31
16 AT3G05250 RING/U-box superfamily protein 0.72 0.31 -0.3
17 AT5G47420 Tryptophan RNA-binding attenuator protein-like 0.72 0.32 -0.33
18 AT5G18620 chromatin remodeling factor17 chromatin remodeling factor17 -0.72 0.3 -0.32
19 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 0.72 0.33 -0.32
20 AT4G04320 malonyl-CoA decarboxylase family protein 0.71 0.31 -0.31
21 AT4G30310 FGGY family of carbohydrate kinase 0.71 0.32 -0.31
22 AT1G78200 Protein phosphatase 2C family protein 0.71 0.32 -0.3
23 AT1G79470 Aldolase-type TIM barrel family protein -0.71 0.31 -0.31
24 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.71 0.32 -0.33
25 AT3G15840 post-illumination chlorophyll fluorescence increase post-illumination chlorophyll
fluorescence increase		 0.7 0.32 -0.32
26 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.7 0.31 -0.31
27 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 0.7 0.32 -0.34
28 AT3G56460 GroES-like zinc-binding alcohol dehydrogenase family
protein		 0.7 0.32 -0.32
29 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.33 -0.33
30 AT5G61570 Protein kinase superfamily protein 0.69 0.32 -0.33
31 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 0.69 0.32 -0.32
32 AT5G46240 potassium channel in Arabidopsis thaliana 1 potassium channel in Arabidopsis
thaliana 1		 0.69 0.32 -0.32
33 AT2G42750 DNAJ heat shock N-terminal domain-containing protein 0.68 0.33 -0.31
34 AT1G07640 Dof-type zinc finger DNA-binding family protein OBP2 0.68 0.27 -0.32
35 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 -0.68 0.32 -0.33
36 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2		 -0.68 0.34 -0.32
37 AT3G56980 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH039, OBP3-RESPONSIVE GENE 3 0.68 0.31 -0.32
38 AT5G09740 histone acetyltransferase of the MYST family 2 histone acetyltransferase of the
MYST family 2		 0.68 0.32 -0.33
39 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CHLOROPLAST BIOGENESIS 4,
CONSTITUTIVE SUBTILISIN 3, GCPE,
4-hydroxy-3-methylbut-2-enyl
diphosphate synthase, ISPG		 0.68 0.3 -0.31
40 AT1G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 40 Blast hits to 40 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.68 0.29 -0.32
41 AT5G11910 alpha/beta-Hydrolases superfamily protein 0.67 0.3 -0.3
42 AT1G75340 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.67 0.3 -0.29
43 AT3G53950 glyoxal oxidase-related protein 0.67 0.31 -0.33
44 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 0.67 0.31 -0.32
45 AT1G04350 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.67 0.32 -0.31
46 AT2G32080 purin-rich alpha 1 purin-rich alpha 1 0.67 0.34 -0.3
47 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.3 -0.32
48 AT1G66350 RGA-like 1 RGL, RGA-like 1 0.67 0.3 -0.33
49 AT1G33780 Protein of unknown function (DUF179) 0.67 0.32 -0.31
50 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 -0.67 0.29 -0.31
51 AT3G03860 APR-like 5 APR-like 5, APR-like 5 0.66 0.32 -0.33
52 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 0.66 0.31 -0.3
53 AT2G37920 copper ion transmembrane transporters embryo defective 1513 0.66 0.32 -0.31
54 AT1G47400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits
to 11 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.31 -0.3
55 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 -0.66 0.31 -0.36
56 AT2G22740 SU(VAR)3-9 homolog 6 SET DOMAIN PROTEIN 23, SU(VAR)3-9
homolog 6		 0.66 0.3 -0.32
57 AT3G57810 Cysteine proteinases superfamily protein 0.66 0.32 -0.31
58 AT5G37930 Protein with RING/U-box and TRAF-like domains 0.66 0.3 -0.31
59 AT3G02700 NC domain-containing protein-related 0.65 0.3 -0.31
60 AT2G36360 Galactose oxidase/kelch repeat superfamily protein 0.65 0.31 -0.29
61 AT3G02300 Regulator of chromosome condensation (RCC1) family protein 0.65 0.31 -0.34
62 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.65 0.33 -0.32
63 AT1G33790 jacalin lectin family protein -0.65 0.32 -0.34
64 AT4G17040 CLP protease R subunit 4 CLP protease R subunit 4, happy on
norflurazon 5		 0.65 0.31 -0.31
65 AT3G02290 RING/U-box superfamily protein 0.65 0.3 -0.31
66 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 -0.65 0.29 -0.32
67 AT5G44870 Disease resistance protein (TIR-NBS-LRR class) family LAZARUS 5, tolerance to Tobacco
ringspot virus 1		 0.65 0.33 -0.32
68 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE -0.65 0.33 -0.34
69 AT5G23240 DNAJ heat shock N-terminal domain-containing protein 0.65 0.31 -0.31
70 AT2G17300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast
hits to 42 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.31 -0.32
71 AT2G43550 Scorpion toxin-like knottin superfamily protein 0.65 0.33 -0.32
72 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.65 0.3 -0.34
73 AT1G25320 Leucine-rich repeat protein kinase family protein -0.65 0.33 -0.31
74 AT3G26750 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme
E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits
to 25 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.32 -0.29
75 AT5G13680 IKI3 family protein ABA-OVERLY SENSITIVE 1, AtELP1,
ELONGATA 2		 -0.65 0.32 -0.32
76 AT4G24730 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.64 0.31 -0.32
77 AT5G19150 pfkB-like carbohydrate kinase family protein 0.64 0.32 -0.31
78 AT5G09840 Putative endonuclease or glycosyl hydrolase -0.64 0.3 -0.31
79 AT3G54480 SKP1/ASK-interacting protein 5 SKP1/ASK-interacting protein 5,
SKP5		 0.64 0.31 -0.3
80 AT3G52860 unknown protein; Has 86 Blast hits to 86 proteins in 36
species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi -
13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.64 0.32 -0.32
81 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.64 0.33 -0.31
82 AT2G41760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function WDYHV (InterPro:IPR019161); Has 201 Blast
hits to 201 proteins in 90 species: Archae - 0; Bacteria -
2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0;
Other Eukaryotes - 27 (source: NCBI BLink).		 0.64 0.3 -0.31
83 AT5G12310 RING/U-box superfamily protein 0.64 0.32 -0.32
84 AT3G01850 Aldolase-type TIM barrel family protein 0.64 0.33 -0.31
85 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain -0.64 0.31 -0.31
86 AT1G23020 ferric reduction oxidase 3 FERRIC REDUCTION OXIDASE 3, ferric
reduction oxidase 3		 0.63 0.31 -0.32
87 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.63 0.3 -0.32
88 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.63 0.33 -0.31
89 AT5G63060 Sec14p-like phosphatidylinositol transfer family protein 0.63 0.32 -0.31
90 AT2G38660 Amino acid dehydrogenase family protein 0.63 0.32 -0.3
91 AT4G24270 EMBRYO DEFECTIVE 140 EMBRYO DEFECTIVE 140 -0.63 0.32 -0.29
92 AT3G55060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast
hits to 33720 proteins in 2065 species: Archae - 846;
Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants -
3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI
BLink).		 -0.63 0.32 -0.32
93 AT4G04880 adenosine/AMP deaminase family protein 0.63 0.32 -0.3
94 AT2G17530 Protein kinase superfamily protein 0.62 0.31 -0.31
95 AT1G07700 Thioredoxin superfamily protein 0.62 0.32 -0.31
96 AT5G67150 HXXXD-type acyl-transferase family protein 0.62 0.32 -0.3
97 AT3G18290 zinc finger protein-related BRUTUS, embryo defective 2454 0.62 0.3 -0.32
98 AT4G25700 beta-hydroxylase 1 B1, BETA CAROTENOID HYDROXYLASE 1,
beta-hydroxylase 1, chy1		 0.62 0.31 -0.32
99 AT3G11930 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.62 0.32 -0.34
100 AT5G49970 pyridoxin (pyrodoxamine) 5'-phosphate oxidase pyridoxin (pyrodoxamine)
5'-phosphate oxidase, HOMOLOG OF
YEAST PYRIDOXINE AUXOTROPHY 3,
pyridoxin (pyrodoxamine)
5'-phosphate oxidase		 0.62 0.32 -0.31
101 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 -0.62 0.31 -0.32
102 AT1G79320 metacaspase 6 metacaspase 6, metacaspase 2c,
metacaspase 6, metacaspase 2c		 -0.61 0.3 -0.31
103 AT4G39550 Galactose oxidase/kelch repeat superfamily protein -0.61 0.32 -0.33
104 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 -0.61 0.35 -0.32
105 AT2G02850 plantacyanin plantacyanin -0.6 0.31 -0.3
106 AT5G50350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.6 0.31 -0.33
107 AT2G23380 SET domain-containing protein CURLY LEAF, INCURVATA 1, SETDOMAIN
GROUP 1, SETDOMAIN 1		 -0.6 0.32 -0.32
108 AT1G75640 Leucine-rich receptor-like protein kinase family protein -0.6 0.31 -0.3
109 AT2G38770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 EMBRYO DEFECTIVE 2765 -0.6 0.3 -0.33
110 AT1G55820 Kinase-related protein of unknown function (DUF1296) -0.6 0.32 -0.32
111 AT2G32280 Protein of unknown function (DUF1218) -0.6 0.3 -0.31
112 AT2G26480 UDP-glucosyl transferase 76D1 UDP-glucosyl transferase 76D1 -0.59 0.32 -0.31
113 AT2G47680 zinc finger (CCCH type) helicase family protein -0.59 0.34 -0.33
114 AT2G17510 ribonuclease II family protein EMBRYO DEFECTIVE 2763 -0.59 0.29 -0.33
115 AT4G08150 KNOTTED-like from Arabidopsis thaliana BREVIPEDICELLUS, BREVIPEDICELLUS
1, KNOTTED-like from Arabidopsis
thaliana		 -0.59 0.33 -0.33
116 AT2G36350 Protein kinase superfamily protein -0.59 0.32 -0.3
117 AT5G60120 target of early activation tagged (EAT) 2 target of early activation tagged
(EAT) 2		 -0.59 0.33 -0.29
118 AT2G19580 tetraspanin2 tetraspanin2 -0.58 0.33 -0.31
119 AT5G50720 HVA22 homologue E ARABIDOPSIS THALIANA HVA22
HOMOLOGUE E, HVA22 homologue E		 -0.58 0.29 -0.32
120 AT3G18360 VQ motif-containing protein -0.58 0.32 -0.3
121 AT1G67760 TCP-1/cpn60 chaperonin family protein -0.58 0.3 -0.31
122 AT5G15010 Tetratricopeptide repeat (TPR)-like superfamily protein -0.56 0.33 -0.31
123 AT3G21090 ABC-2 type transporter family protein ATP-binding cassette G15 -0.56 0.32 -0.3
124 AT5G18560 Integrase-type DNA-binding superfamily protein PUCHI -0.56 0.34 -0.32
125 AT1G78220 general regulatory factor 13 GF 14 PI CHAIN, general regulatory
factor 13		 -0.55 0.32 -0.3
126 AT5G13520 peptidase M1 family protein -0.55 0.32 -0.31
127 AT5G24270 Calcium-binding EF-hand family protein SALT OVERLY SENSITIVE 3,
CALCINEURIN B-LIKE PROTEIN 4, SALT
OVERLY SENSITIVE 3		 -0.55 0.29 -0.31
128 AT3G24660 transmembrane kinase-like 1 transmembrane kinase-like 1 -0.55 0.33 -0.3
129 AT1G13330 Arabidopsis Hop2 homolog Arabidopsis Hop2 homolog -0.55 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0230 Rutin - - polyphenol biosynthesis -0.68 0.43 -0.41