AT3G55120 : A11
Query Information
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AGICode AT3G55120
Description Chalcone-flavanone isomerase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G55120 Chalcone-flavanone isomerase family protein A11, CHALCONE FLAVANONE ISOMERASE,
TRANSPARENT TESTA 5		 1 0.32 -0.31
2 AT2G23910 NAD(P)-binding Rossmann-fold superfamily protein 0.83 0.33 -0.31
3 AT1G03905 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette I19 0.77 0.32 -0.34
4 AT3G51240 flavanone 3-hydroxylase F3'H, flavanone 3-hydroxylase,
TRANSPARENT TESTA 6		 0.76 0.32 -0.3
5 AT4G34990 myb domain protein 32 myb domain protein 32, myb domain
protein 32		 0.75 0.3 -0.31
6 AT4G25500 arginine/serine-rich splicing factor 35 arginine/serine-rich splicing
factor 40, AT-SRP40, ARABIDOPSIS
THALIANA ARGININE/SERINE-RICH
SPLICING FACTOR 35, ATRSP40,
arginine/serine-rich splicing
factor 40, arginine/serine-rich
splicing factor 35		 0.75 0.3 -0.31
7 AT5G13930 Chalcone and stilbene synthase family protein ATCHS, CHALCONE SYNTHASE,
TRANSPARENT TESTA 4		 0.75 0.31 -0.32
8 AT4G28480 DNAJ heat shock family protein 0.74 0.3 -0.3
9 AT5G05270 Chalcone-flavanone isomerase family protein 0.74 0.32 -0.32
10 AT1G78570 rhamnose biosynthesis 1 ARABIDOPSIS THALIANA RHAMNOSE
BIOSYNTHESIS 1, rhamnose
biosynthesis 1, REPRESSOR OF LRX1
1		 0.74 0.3 -0.32
11 AT3G16910 acyl-activating enzyme 7 acyl-activating enzyme 7, ACETATE
NON-UTILIZING 1		 -0.73 0.3 -0.35
12 AT3G27020 YELLOW STRIPE like 6 YELLOW STRIPE like 6 -0.73 0.32 -0.32
13 AT1G16780 Inorganic H pyrophosphatase family protein AtVHP2;2, VHP2;2 -0.73 0.32 -0.3
14 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.72 0.3 -0.31
15 AT3G50880 DNA glycosylase superfamily protein -0.72 0.3 -0.32
16 AT1G64720 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 CP5 -0.72 0.33 -0.3
17 AT2G37040 PHE ammonia lyase 1 ATPAL1, PHE ammonia lyase 1 0.71 0.3 -0.32
18 AT3G43510 transposable element gene 0.71 0.3 -0.32
19 AT1G09350 galactinol synthase 3 galactinol synthase 3, galactinol
synthase 3		 0.71 0.32 -0.34
20 AT1G06000 UDP-Glycosyltransferase superfamily protein 0.71 0.31 -0.3
21 AT3G06850 2-oxoacid dehydrogenases acyltransferase family protein BCE2, DARK INDUCIBLE 3, LTA1 -0.71 0.34 -0.33
22 AT5G57110 autoinhibited Ca2+ -ATPase, isoform 8 autoinhibited Ca2+ -ATPase,
isoform 8, AUTOINHIBITED CA2+
-ATPASE, ISOFORM 8		 0.71 0.33 -0.32
23 AT3G49500 RNA-dependent RNA polymerase 6 RNA-dependent RNA polymerase 6,
SILENCING DEFECTIVE 1, SUPPRESSOR
OF GENE SILENCING 2		 -0.71 0.3 -0.32
24 AT1G35470 SPla/RYanodine receptor (SPRY) domain-containing protein -0.7 0.3 -0.33
25 AT5G05800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.7 0.3 -0.32
26 AT4G15420 Ubiquitin fusion degradation UFD1 family protein 0.7 0.33 -0.31
27 AT1G56280 drought-induced 19 drought-induced 19,
drought-induced 19		 -0.7 0.31 -0.33
28 AT2G38440 SCAR homolog 2 SCAR HOMOLOG 2, DIS3, IRREGULAR
TRICHOME BRANCH1, SCAR homolog 2,
WAVE4		 -0.7 0.32 -0.33
29 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 -0.7 0.33 -0.34
30 AT1G68190 B-box zinc finger family protein -0.69 0.32 -0.31
31 AT3G15160 unknown protein; Has 266 Blast hits to 264 proteins in 44
species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 0;
Plants - 199; Viruses - 0; Other Eukaryotes - 9 (source:
NCBI BLink).		 -0.69 0.33 -0.3
32 AT4G16480 inositol transporter 4 ATINT4, inositol transporter 4 -0.69 0.31 -0.3
33 AT1G18460 alpha/beta-Hydrolases superfamily protein -0.68 0.31 -0.31
34 AT3G21560 UDP-Glycosyltransferase superfamily protein UGT84A2 0.68 0.32 -0.33
35 AT5G48250 B-box type zinc finger protein with CCT domain 0.68 0.3 -0.31
36 AT1G29260 peroxin 7 ARABIDOPSIS PEROXIN 7, peroxin 7 -0.68 0.32 -0.31
37 AT4G34340 TBP-associated factor 8 TBP-associated factor 8 0.68 0.34 -0.32
38 AT3G22840 Chlorophyll A-B binding family protein ELIP, EARLY LIGHT-INDUCABLE
PROTEIN		 0.68 0.32 -0.31
39 AT5G15170 tyrosyl-DNA phosphodiesterase-related tyrosyl-DNA phosphodiesterase 1 -0.68 0.3 -0.34
40 AT4G15130 phosphorylcholine cytidylyltransferase2 ATCCT2, phosphorylcholine
cytidylyltransferase2		 0.68 0.31 -0.3
41 AT5G42780 homeobox protein 27 homeobox protein 27, homeobox
protein 27, ZINC FINGER
HOMEODOMAIN 13		 -0.68 0.3 -0.33
42 AT3G23080 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.68 0.32 -0.35
43 AT3G53500 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32		 0.68 0.28 -0.33
44 AT5G48640 Cyclin family protein -0.68 0.32 -0.3
45 AT1G37130 nitrate reductase 2 ARABIDOPSIS NITRATE REDUCTASE 2,
B29, CHLORATE RESISTANT 3, nitrate
reductase 2, NIA2-1, NITRATE
REDUCTASE, NITRATE REDUCTASE 2		 -0.67 0.31 -0.28
46 AT2G02780 Leucine-rich repeat protein kinase family protein -0.67 0.3 -0.32
47 AT1G30550 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.67 0.33 -0.32
48 AT2G47890 B-box type zinc finger protein with CCT domain 0.67 0.32 -0.32
49 AT1G32860 Glycosyl hydrolase superfamily protein 0.67 0.31 -0.3
50 AT1G68500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25422.1); Has 16 Blast hits
to 16 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.32
51 AT3G01360 Family of unknown function (DUF716) -0.66 0.34 -0.33
52 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.32 -0.31
53 AT4G10060 Beta-glucosidase, GBA2 type family protein -0.66 0.3 -0.29
54 AT4G14920 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.66 0.33 -0.28
55 AT3G47000 Glycosyl hydrolase family protein -0.66 0.33 -0.31
56 AT4G15560 Deoxyxylulose-5-phosphate synthase AtCLA1, CLA, CLOROPLASTOS
ALTERADOS 1, DEF,
1-DEOXY-D-XYLULOSE 5-PHOSPHATE
SYNTHASE 2, 1-DEOXY-D-XYLULOSE
5-PHOSPHATE SYNTHASE		 -0.66 0.29 -0.34
57 AT3G55580 Regulator of chromosome condensation (RCC1) family protein 0.66 0.31 -0.32
58 AT2G17840 Senescence/dehydration-associated protein-related EARLY-RESPONSIVE TO DEHYDRATION 7 0.66 0.31 -0.3
59 AT3G09540 Pectin lyase-like superfamily protein 0.65 0.31 -0.31
60 AT2G44020 Mitochondrial transcription termination factor family
protein		 0.65 0.32 -0.33
61 AT2G46420 Plant protein 1589 of unknown function -0.65 0.31 -0.3
62 AT4G14690 Chlorophyll A-B binding family protein EARLY LIGHT-INDUCIBLE PROTEIN 2 0.65 0.3 -0.3
63 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.65 0.31 -0.32
64 AT1G02330 CONTAINS InterPro DOMAIN/s: Hepatocellular
carcinoma-associated antigen 59 (InterPro:IPR010756); Has
1239 Blast hits to 998 proteins in 204 species: Archae - 4;
Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87;
Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).		 0.65 0.32 -0.3
65 AT3G19800 Protein of unknown function (DUF177) -0.64 0.32 -0.33
66 AT5G42570 B-cell receptor-associated 31-like 0.64 0.31 -0.35
67 AT1G49720 abscisic acid responsive element-binding factor 1 abscisic acid responsive
element-binding factor 1		 0.64 0.32 -0.32
68 AT3G23590 REF4-related 1 MED33A, REF4-related 1 -0.64 0.34 -0.32
69 AT4G38580 farnesylated protein 6 farnesylated protein 6,
farnesylated protein 6, HEAVY
METAL ASSOCIATED ISOPRENYLATED
PLANT PROTEIN 26		 0.64 0.31 -0.31
70 AT1G63260 tetraspanin10 tetraspanin10 -0.64 0.32 -0.3
71 AT5G01350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.32 -0.32
72 AT5G48810 cytochrome B5 isoform D ATB5-B, ARABIDOPSIS CYTOCHROME B5
ISOFORM D, B5 #3, cytochrome B5
isoform D		 -0.63 0.31 -0.29
73 AT5G40470 RNI-like superfamily protein -0.63 0.31 -0.33
74 AT4G28020 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0066
(InterPro:IPR001378); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.63 0.3 -0.3
75 AT5G63990 Inositol monophosphatase family protein 0.63 0.3 -0.31
76 AT1G57600 MBOAT (membrane bound O-acyl transferase) family protein -0.63 0.32 -0.33
77 AT1G55310 SC35-like splicing factor 33 SC35-LIKE SPLICING FACTOR 33,
SC35-like splicing factor 33,
SC35-LIKE SPLICING FACTOR 33,
SC35-like splicing factor 33		 -0.63 0.31 -0.34
78 AT4G37640 calcium ATPase 2 calcium ATPase 2 0.63 0.34 -0.32
79 AT1G75130 cytochrome P450, family 721, subfamily A, polypeptide 1 cytochrome P450, family 721,
subfamily A, polypeptide 1		 -0.63 0.31 -0.3
80 AT5G17050 UDP-glucosyl transferase 78D2 UDP-glucosyl transferase 78D2 0.63 0.32 -0.3
81 AT3G29230 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.29 -0.31
82 AT5G58760 damaged DNA binding 2 damaged DNA binding 2 0.62 0.31 -0.32
83 AT5G18140 Chaperone DnaJ-domain superfamily protein -0.62 0.3 -0.31
84 AT1G17665 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to
146 proteins in 39 species: Archae - 0; Bacteria - 4;
Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 0.62 0.32 -0.31
85 AT1G80780 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.62 0.3 -0.35
86 AT5G14500 aldose 1-epimerase family protein -0.62 0.31 -0.31
87 AT5G42620 metalloendopeptidases;zinc ion binding -0.62 0.31 -0.3
88 AT3G52480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
petal differentiation and expansion stage; Has 28 Blast
hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.3 -0.32
89 AT4G00880 SAUR-like auxin-responsive protein family -0.61 0.31 -0.32
90 AT5G51410 LUC7 N_terminus domain-containing protein 0.61 0.3 -0.32
91 AT1G18660 zinc finger (C3HC4-type RING finger) family protein 0.61 0.32 -0.33
92 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.31 -0.31
93 AT1G80790 XH/XS domain-containing protein factor of DNA methylation 5 -0.61 0.29 -0.32
94 AT1G58370 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 ARABIDOPSIS THALIANA XYLANASE 1,
RXF12		 -0.61 0.29 -0.31
95 AT1G21120 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 2		 0.61 0.32 -0.32
96 AT2G33250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G04310.1); Has 41 Blast
hits to 41 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.31
97 AT1G20440 cold-regulated 47 AtCOR47, cold-regulated 47, RD17 0.6 0.32 -0.31
98 AT1G25230 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.6 0.31 -0.31
99 AT2G19190 FLG22-induced receptor-like kinase 1 FLG22-induced receptor-like kinase
1		 0.6 0.31 -0.29
100 AT5G08630 DDT domain-containing protein 0.6 0.33 -0.31
101 AT5G27360 Major facilitator superfamily protein SFP2 -0.6 0.31 -0.33
102 AT3G49920 voltage dependent anion channel 5 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 5, voltage
dependent anion channel 5		 -0.6 0.31 -0.31
103 AT5G53830 VQ motif-containing protein -0.6 0.3 -0.33
104 AT5G18670 beta-amylase 3 BETA-AMYLASE 9, beta-amylase 3 -0.59 0.3 -0.32
105 AT1G72990 beta-galactosidase 17 beta-galactosidase 17 -0.59 0.31 -0.31
106 AT1G23860 RS-containing zinc finger protein 21 RS-containing zinc finger protein
21, RS-containing zinc finger
protein 21, RS-containing zinc
finger protein 21, SRZ-21, SRZ21		 -0.59 0.29 -0.3
107 AT4G04860 DERLIN-2.2 DERLIN-2.2 0.59 0.3 -0.33
108 AT3G61430 plasma membrane intrinsic protein 1A ARABIDOPSIS THALIANA PLASMA
MEMBRANE INTRINSIC PROTEIN 1,
PLASMA MEMBRANE INTRINSIC PROTEIN
1, PLASMA MEMBRANE INTRINSIC
PROTEIN 1;1, plasma membrane
intrinsic protein 1A		 -0.59 0.29 -0.32
109 AT3G51590 lipid transfer protein 12 lipid transfer protein 12 -0.59 0.31 -0.31
110 AT3G18215 Protein of unknown function, DUF599 -0.59 0.34 -0.3
111 AT2G01680 Ankyrin repeat family protein -0.59 0.32 -0.34
112 AT1G60460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; Has
23 Blast hits to 23 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.32 -0.29
113 AT4G38960 B-box type zinc finger family protein 0.59 0.3 -0.32
114 AT5G47060 Protein of unknown function (DUF581) 0.59 0.34 -0.29
115 AT1G09010 glycoside hydrolase family 2 protein -0.59 0.32 -0.32
116 AT5G07990 Cytochrome P450 superfamily protein CYTOCHROME P450 75B1, D501,
TRANSPARENT TESTA 7		 0.59 0.32 -0.29
117 AT1G76080 chloroplastic drought-induced stress protein of 32 kD ARABIDOPSIS THALIANA CHLOROPLASTIC
DROUGHT-INDUCED STRESS PROTEIN OF
32 KD, chloroplastic
drought-induced stress protein of
32 kD		 -0.58 0.33 -0.31
118 AT5G64880 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.32 -0.33
119 AT5G05700 arginine-tRNA protein transferase 1 ATATE1, arginine-tRNA protein
transferase 1, DELAYED LEAF
SENESCENCE 1		 -0.58 0.31 -0.33
120 AT5G23800 DOMAIN OF UNKNOWN FUNCTION 724 10 DOMAIN OF UNKNOWN FUNCTION 724 10,
DOMAIN OF UNKNOWN FUNCTION 724 10		 -0.58 0.32 -0.34
121 AT1G08680 ARF GAP-like zinc finger-containing protein ZIGA4 ARF-GAP domain 14, ARF GAP-like
zinc finger-containing protein
ZIGA4		 -0.58 0.32 -0.31
122 AT5G59960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.58 0.33 -0.29
123 AT5G64570 beta-D-xylosidase 4 ARABIDOPSIS THALIANA
BETA-D-XYLOSIDASE 4,
beta-D-xylosidase 4		 -0.58 0.32 -0.31
124 AT4G39240 Galactose oxidase/kelch repeat superfamily protein -0.58 0.3 -0.28