AGICode | AT3G55010 |
Description | phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G55010 | phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) |
ATPURM, EMBRYO DEFECTIVE 2818, PUR5 |
1 | 0.31 | -0.32 | ||
2 | AT4G10480 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein |
0.89 | 0.32 | -0.32 | |||
3 | AT5G47210 | Hyaluronan / mRNA binding family | 0.87 | 0.3 | -0.29 | |||
4 | AT2G20450 | Ribosomal protein L14 | 0.87 | 0.3 | -0.31 | |||
5 | AT4G25740 | RNA binding Plectin/S10 domain-containing protein | 0.87 | 0.31 | -0.31 | |||
6 | AT3G04840 | Ribosomal protein S3Ae | 0.86 | 0.31 | -0.31 | |||
7 | AT3G10610 | Ribosomal S17 family protein | 0.86 | 0.32 | -0.32 | |||
8 | AT3G62120 | Class II aaRS and biotin synthetases superfamily protein | 0.86 | 0.32 | -0.32 | |||
9 | AT1G07370 | proliferating cellular nuclear antigen 1 | PROLIFERATING CELLULAR NUCLEAR ANTIGEN 1, proliferating cellular nuclear antigen 1 |
0.86 | 0.33 | -0.31 | ||
10 | AT3G09630 | Ribosomal protein L4/L1 family | 0.86 | 0.34 | -0.33 | |||
11 | AT4G34555 | Ribosomal protein S25 family protein | 0.85 | 0.32 | -0.31 | |||
12 | AT4G17520 | Hyaluronan / mRNA binding family | 0.85 | 0.32 | -0.35 | |||
13 | AT5G56710 | Ribosomal protein L31e family protein | 0.85 | 0.31 | -0.32 | |||
14 | AT4G31700 | ribosomal protein S6 | ribosomal protein S6, RPS6A | 0.85 | 0.32 | -0.36 | ||
15 | AT3G03960 | TCP-1/cpn60 chaperonin family protein | 0.85 | 0.32 | -0.29 | |||
16 | AT1G12270 | stress-inducible protein, putative | Hop1 | 0.85 | 0.33 | -0.3 | ||
17 | AT1G17560 | Ribosomal protein L14p/L23e family protein | HUELLENLOS | 0.84 | 0.33 | -0.31 | ||
18 | AT1G07070 | Ribosomal protein L35Ae family protein | 0.84 | 0.3 | -0.33 | |||
19 | AT3G18130 | receptor for activated C kinase 1C | receptor for activated C kinase 1C, receptor for activated C kinase 1C |
0.84 | 0.31 | -0.32 | ||
20 | AT3G42660 | transducin family protein / WD-40 repeat family protein | 0.83 | 0.32 | -0.32 | |||
21 | AT1G49600 | RNA-binding protein 47A | RNA-binding protein 47A, RNA-binding protein 47A |
0.83 | 0.31 | -0.3 | ||
22 | AT1G79650 | Rad23 UV excision repair protein family | Arabidopsis thaliana aldehyde oxidase 1, RADIATION SENSITIVE23B |
0.83 | 0.32 | -0.31 | ||
23 | AT5G20890 | TCP-1/cpn60 chaperonin family protein | 0.83 | 0.33 | -0.3 | |||
24 | AT3G20050 | T-complex protein 1 alpha subunit | T-complex protein 1 alpha subunit, T-complex protein 1 alpha subunit |
0.83 | 0.3 | -0.31 | ||
25 | AT3G06500 | Plant neutral invertase family protein | alkaline/neutral invertase C | -0.82 | 0.32 | -0.3 | ||
26 | AT3G23920 | beta-amylase 1 | beta-amylase 1, BETA-AMYLASE 7, TR-BAMY |
-0.82 | 0.33 | -0.31 | ||
27 | AT5G18130 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.82 | 0.32 | -0.33 | |||
28 | AT4G25890 | 60S acidic ribosomal protein family | 0.82 | 0.32 | -0.33 | |||
29 | AT4G20440 | small nuclear ribonucleoprotein associated protein B | small nuclear ribonucleoprotein associated protein B |
0.82 | 0.33 | -0.32 | ||
30 | AT2G20490 | nucleolar RNA-binding Nop10p family protein | EMBRYO SAC DEVELOPMENT ARREST 27, NOP10 |
0.82 | 0.31 | -0.31 | ||
31 | AT2G29570 | proliferating cell nuclear antigen 2 | A. THALIANA PROLIFERATING CELL NUCLEAR ANTIGEN 2, proliferating cell nuclear antigen 2 |
0.82 | 0.3 | -0.31 | ||
32 | AT1G29400 | MEI2-like protein 5 | MEI2-like protein 5, MEI2-like protein 5 |
-0.81 | 0.32 | -0.31 | ||
33 | AT2G27710 | 60S acidic ribosomal protein family | 0.81 | 0.33 | -0.33 | |||
34 | AT1G15810 | S15/NS1, RNA-binding protein | 0.81 | 0.32 | -0.34 | |||
35 | AT4G28310 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.81 | 0.32 | -0.31 | |||
36 | AT5G60990 | DEA(D/H)-box RNA helicase family protein | 0.81 | 0.33 | -0.3 | |||
37 | AT2G19670 | protein arginine methyltransferase 1A | ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 1A, protein arginine methyltransferase 1A |
0.81 | 0.32 | -0.3 | ||
38 | AT4G17390 | Ribosomal protein L23/L15e family protein | 0.81 | 0.31 | -0.32 | |||
39 | AT1G61580 | R-protein L3 B | ARABIDOPSIS RIBOSOMAL PROTEIN 2, R-protein L3 B |
0.81 | 0.32 | -0.32 | ||
40 | AT3G44750 | histone deacetylase 3 | ATHD2A, HISTONE DEACETYLASE 2A, histone deacetylase 3, HDT1 |
0.81 | 0.32 | -0.31 | ||
41 | AT1G08360 | Ribosomal protein L1p/L10e family | 0.81 | 0.33 | -0.31 | |||
42 | AT3G52580 | Ribosomal protein S11 family protein | 0.81 | 0.31 | -0.31 | |||
43 | AT5G02530 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.81 | 0.31 | -0.34 | |||
44 | AT1G48630 | receptor for activated C kinase 1B | receptor for activated C kinase 1B, receptor for activated C kinase 1B |
0.81 | 0.28 | -0.31 | ||
45 | AT5G61130 | plasmodesmata callose-binding protein 1 | plasmodesmata callose-binding protein 1 |
0.8 | 0.32 | -0.3 | ||
46 | AT3G57000 | nucleolar essential protein-related | 0.8 | 0.32 | -0.31 | |||
47 | AT1G24360 | NAD(P)-binding Rossmann-fold superfamily protein | 0.8 | 0.32 | -0.31 | |||
48 | AT3G04770 | 40s ribosomal protein SA B | 40s ribosomal protein SA B | 0.8 | 0.3 | -0.31 | ||
49 | AT4G34740 | GLN phosphoribosyl pyrophosphate amidotransferase 2 | GLN phosphoribosyl pyrophosphate amidotransferase 2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATPURF2, CHLOROPLAST IMPORT APPARATUS 1 |
0.8 | 0.29 | -0.31 | ||
50 | AT1G13730 | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain |
0.8 | 0.32 | -0.3 | |||
51 | AT3G46940 | DUTP-PYROPHOSPHATASE-LIKE 1 | DUTP-PYROPHOSPHATASE-LIKE 1 | 0.8 | 0.31 | -0.31 | ||
52 | AT3G11710 | lysyl-tRNA synthetase 1 | lysyl-tRNA synthetase 1 | 0.79 | 0.32 | -0.33 | ||
53 | AT1G20950 | Phosphofructokinase family protein | 0.79 | 0.3 | -0.33 | |||
54 | AT1G28960 | nudix hydrolase homolog 15 | ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15, nudix hydrolase homolog 15, nudix hydrolase homolog 15 |
-0.79 | 0.3 | -0.32 | ||
55 | AT5G17630 | Nucleotide/sugar transporter family protein | 0.79 | 0.3 | -0.31 | |||
56 | AT2G25625 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.79 | 0.32 | -0.31 | |||
57 | AT5G42050 | DCD (Development and Cell Death) domain protein | -0.79 | 0.28 | -0.34 | |||
58 | AT4G30220 | small nuclear ribonucleoprotein F | small nuclear ribonucleoprotein F | 0.79 | 0.32 | -0.31 | ||
59 | AT3G02530 | TCP-1/cpn60 chaperonin family protein | 0.79 | 0.31 | -0.31 | |||
60 | AT2G33380 | Caleosin-related family protein | Arabidopsis thaliana caleosin 3, caleosin 3, caleosin 3, RESPONSIVE TO DESSICATION 20 |
-0.79 | 0.3 | -0.32 | ||
61 | AT3G44590 | 60S acidic ribosomal protein family | 0.79 | 0.29 | -0.29 | |||
62 | AT3G17000 | ubiquitin-conjugating enzyme 32 | ubiquitin-conjugating enzyme 32 | -0.79 | 0.3 | -0.34 | ||
63 | AT1G04170 | eukaryotic translation initiation factor 2 gamma subunit | eukaryotic translation initiation factor 2 gamma subunit |
0.79 | 0.32 | -0.31 | ||
64 | AT2G29260 | NAD(P)-binding Rossmann-fold superfamily protein | 0.78 | 0.33 | -0.3 | |||
65 | AT5G18640 | alpha/beta-Hydrolases superfamily protein | -0.78 | 0.31 | -0.33 | |||
66 | AT4G03030 | Galactose oxidase/kelch repeat superfamily protein | -0.78 | 0.29 | -0.32 | |||
67 | AT1G09830 | Glycinamide ribonucleotide (GAR) synthetase | 0.78 | 0.31 | -0.31 | |||
68 | AT5G64670 | Ribosomal protein L18e/L15 superfamily protein | 0.78 | 0.31 | -0.31 | |||
69 | AT4G30800 | Nucleic acid-binding, OB-fold-like protein | 0.78 | 0.29 | -0.33 | |||
70 | AT1G21410 | F-box/RNI-like superfamily protein | SKP2A | -0.77 | 0.31 | -0.31 | ||
71 | AT1G73980 | Phosphoribulokinase / Uridine kinase family | -0.77 | 0.32 | -0.31 | |||
72 | AT3G44880 | Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain |
ACCELERATED CELL DEATH 1, LETHAL LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE A OXYGENASE |
-0.77 | 0.31 | -0.31 | ||
73 | AT3G26380 | Melibiase family protein | -0.77 | 0.3 | -0.34 | |||
74 | AT4G18140 | SCP1-like small phosphatase 4b | SCP1-like small phosphatase 4b | -0.77 | 0.33 | -0.31 | ||
75 | AT1G47960 | cell wall / vacuolar inhibitor of fructosidase 1 | CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1, cell wall / vacuolar inhibitor of fructosidase 1 |
-0.77 | 0.33 | -0.32 | ||
76 | AT1G17550 | homology to ABI2 | homology to ABI2 | -0.77 | 0.33 | -0.3 | ||
77 | AT1G21000 | PLATZ transcription factor family protein | -0.76 | 0.33 | -0.33 | |||
78 | AT5G13800 | pheophytinase | Co-regulated with NYE1, pheophytinase |
-0.76 | 0.32 | -0.32 | ||
79 | AT1G64660 | methionine gamma-lyase | methionine gamma-lyase, methionine gamma-lyase |
-0.76 | 0.34 | -0.29 | ||
80 | AT3G17250 | Protein phosphatase 2C family protein | -0.76 | 0.3 | -0.32 | |||
81 | AT2G01490 | phytanoyl-CoA dioxygenase (PhyH) family protein | -0.76 | 0.3 | -0.31 | |||
82 | AT2G22430 | homeobox protein 6 | homeobox protein 6, homeobox protein 6 |
-0.76 | 0.32 | -0.3 | ||
83 | AT3G08860 | PYRIMIDINE 4 | PYRIMIDINE 4 | -0.76 | 0.31 | -0.32 | ||
84 | AT5G17860 | calcium exchanger 7 | calcium exchanger 7 | -0.76 | 0.32 | -0.34 | ||
85 | AT5G58690 | phosphatidylinositol-speciwc phospholipase C5 | ATPLC5, phosphatidylinositol-speciwc phospholipase C5 |
-0.75 | 0.33 | -0.32 | ||
86 | AT3G12520 | sulfate transporter 4;2 | sulfate transporter 4;2 | -0.75 | 0.3 | -0.32 | ||
87 | AT4G37980 | elicitor-activated gene 3-1 | ATCAD7, CINNAMYL-ALCOHOL DEHYDROGENASE 7, ELICITOR-ACTIVATED GENE 3, elicitor-activated gene 3-1 |
-0.75 | 0.31 | -0.32 | ||
88 | AT2G47710 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.75 | 0.31 | -0.33 | |||
89 | AT1G24070 | cellulose synthase-like A10 | cellulose synthase-like A10, CELLULOSE SYNTHASE LIKE A10, cellulose synthase-like A10 |
-0.75 | 0.32 | -0.32 | ||
90 | AT1G79610 | Na+/H+ antiporter 6 | ARABIDOPSIS NA+/H+ ANTIPORTER 6, Na+/H+ antiporter 6 |
-0.75 | 0.32 | -0.31 | ||
91 | AT5G46410 | SCP1-like small phosphatase 4 | SCP1-like small phosphatase 4 | -0.75 | 0.31 | -0.32 | ||
92 | AT3G11420 | Protein of unknown function (DUF604) | -0.75 | 0.3 | -0.32 | |||
93 | AT3G56620 | nodulin MtN21 /EamA-like transporter family protein | -0.75 | 0.32 | -0.3 | |||
94 | AT5G11840 | Protein of unknown function (DUF1230) | -0.74 | 0.3 | -0.33 | |||
95 | AT1G58200 | MSCS-like 3 | MSCS-like 3 | -0.74 | 0.31 | -0.34 | ||
96 | AT4G33950 | Protein kinase superfamily protein | OPEN STOMATA 1, OPEN STOMATA 1, P44, SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-6, SNF1-RELATED PROTEIN KINASE 2.6, SRK2E |
-0.74 | 0.3 | -0.31 | ||
97 | AT3G60140 | Glycosyl hydrolase superfamily protein | BETA GLUCOSIDASE 30, DARK INDUCIBLE 2, SENESCENCE-RELATED GENE 2 |
-0.74 | 0.3 | -0.31 | ||
98 | AT5G03490 | UDP-Glycosyltransferase superfamily protein | -0.74 | 0.32 | -0.33 | |||
99 | AT5G57550 | xyloglucan endotransglucosylase/hydrolase 25 | xyloglucan endotransglucosylase/hydrolase 25, xyloglucan endotransglycosylase 3 |
-0.74 | 0.33 | -0.31 | ||
100 | AT2G28400 | Protein of unknown function, DUF584 | -0.74 | 0.31 | -0.31 | |||
101 | AT1G59700 | glutathione S-transferase TAU 16 | glutathione S-transferase TAU 16, glutathione S-transferase TAU 16 |
-0.74 | 0.31 | -0.31 | ||
102 | AT5G47070 | Protein kinase superfamily protein | -0.74 | 0.32 | -0.32 | |||
103 | AT3G47960 | Major facilitator superfamily protein | -0.74 | 0.31 | -0.3 | |||
104 | AT4G27410 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
Arabidopsis NAC domain containing protein 72, RESPONSIVE TO DESICCATION 26 |
-0.74 | 0.33 | -0.31 | ||
105 | AT2G27830 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.74 | 0.31 | -0.32 | |||
106 | AT4G17840 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.73 | 0.34 | -0.3 | |||
107 | AT1G49670 | ARP protein (REF) | NQR | -0.73 | 0.31 | -0.31 | ||
108 | AT1G12050 | fumarylacetoacetase, putative | -0.73 | 0.32 | -0.31 | |||
109 | AT2G30360 | SOS3-interacting protein 4 | CBL-INTERACTING PROTEIN KINASE 11, PROTEIN KINASE SOS2-LIKE 5, SOS3-interacting protein 4, SNF1-RELATED PROTEIN KINASE 3.22 |
-0.73 | 0.31 | -0.31 | ||
110 | AT5G18200 | UTP:galactose-1-phosphate uridylyltransferases;ribose-5-phosphate adenylyltransferases |
-0.73 | 0.33 | -0.31 | |||
111 | AT1G18470 | Transmembrane Fragile-X-F-associated protein | -0.73 | 0.31 | -0.31 | |||
112 | AT4G27990 | YGGT family protein | ATYLMG1-2, YLMG1-2 | -0.73 | 0.31 | -0.32 | ||
113 | AT1G08460 | histone deacetylase 8 | ATHDA8, histone deacetylase 8, HISTONE DEACETYLASE 8 |
-0.73 | 0.33 | -0.33 | ||
114 | AT2G43530 | Scorpion toxin-like knottin superfamily protein | -0.73 | 0.34 | -0.3 | |||
115 | AT5G49660 | Leucine-rich repeat transmembrane protein kinase family protein |
XYLEM INTERMIXED WITH PHLOEM 1 | -0.73 | 0.32 | -0.29 | ||
116 | AT5G02940 | Protein of unknown function (DUF1012) | -0.73 | 0.32 | -0.3 | |||
117 | AT5G57815 | Cytochrome c oxidase, subunit Vib family protein | -0.72 | 0.32 | -0.33 | |||
118 | AT1G47128 | Granulin repeat cysteine protease family protein | responsive to dehydration 21, RESPONSIVE TO DEHYDRATION 21A |
-0.72 | 0.31 | -0.29 | ||
119 | AT1G19270 | DA1 | DA1 | -0.72 | 0.33 | -0.33 | ||
120 | AT1G52410 | TSK-associating protein 1 | TSK-associating protein 1 | -0.72 | 0.32 | -0.31 | ||
121 | AT1G31550 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.72 | 0.3 | -0.33 | |||
122 | AT1G33270 | Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein |
-0.72 | 0.33 | -0.36 | |||
123 | AT4G29010 | Enoyl-CoA hydratase/isomerase family | ABNORMAL INFLORESCENCE MERISTEM | -0.72 | 0.33 | -0.31 | ||
124 | AT4G19960 | K+ uptake permease 9 | ATKUP9, HAK9, KT9, K+ uptake permease 9 |
-0.72 | 0.33 | -0.32 | ||
125 | AT5G22270 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.72 | 0.33 | -0.31 | |||
126 | AT5G01820 | serine/threonine protein kinase 1 | ATCIPK14, serine/threonine protein kinase 1, CBL-INTERACTING PROTEIN KINASE 14, SOS2-like protein kinase 24, SNF1-RELATED PROTEIN KINASE 3.15, serine/threonine protein kinase 1 |
-0.72 | 0.32 | -0.32 | ||
127 | AT3G46110 | Domain of unknown function (DUF966) | -0.72 | 0.31 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
128 | C0217 | Putative glucosinole | - | - | - | 0.87 | 0.43 | -0.45 |