AGICode | AT3G54650 |
Description | RNI-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G54650 | RNI-like superfamily protein | FBL17 | 1 | 0.32 | -0.3 | ||
2 | AT4G20440 | small nuclear ribonucleoprotein associated protein B | small nuclear ribonucleoprotein associated protein B |
0.84 | 0.33 | -0.32 | ||
3 | AT5G16550 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.78 | 0.3 | -0.32 | |||
4 | AT4G17840 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.77 | 0.32 | -0.32 | |||
5 | AT1G66900 | alpha/beta-Hydrolases superfamily protein | -0.77 | 0.32 | -0.32 | |||
6 | AT1G31850 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.76 | 0.32 | -0.32 | |||
7 | AT3G27640 | Transducin/WD40 repeat-like superfamily protein | 0.76 | 0.3 | -0.32 | |||
8 | AT4G37980 | elicitor-activated gene 3-1 | ATCAD7, CINNAMYL-ALCOHOL DEHYDROGENASE 7, ELICITOR-ACTIVATED GENE 3, elicitor-activated gene 3-1 |
-0.75 | 0.31 | -0.31 | ||
9 | AT3G06170 | Serinc-domain containing serine and sphingolipid biosynthesis protein |
-0.75 | 0.32 | -0.33 | |||
10 | AT4G11570 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.75 | 0.32 | -0.32 | |||
11 | AT1G76130 | alpha-amylase-like 2 | alpha-amylase-like 2, ARABIDOPSIS THALIANA ALPHA-AMYLASE-LIKE 2 |
-0.74 | 0.33 | -0.33 | ||
12 | AT4G14880 | O-acetylserine (thiol) lyase (OAS-TL) isoform A1 | ATCYS-3A, CYTACS1, O-acetylserine (thiol) lyase (OAS-TL) isoform A1, ONSET OF LEAF DEATH 3 |
-0.74 | 0.32 | -0.34 | ||
13 | AT1G44830 | Integrase-type DNA-binding superfamily protein | 0.74 | 0.32 | -0.33 | |||
14 | AT1G50020 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.73 | 0.35 | -0.31 | |||
15 | AT1G30500 | nuclear factor Y, subunit A7 | nuclear factor Y, subunit A7 | -0.73 | 0.31 | -0.3 | ||
16 | AT1G75280 | NmrA-like negative transcriptional regulator family protein | -0.73 | 0.33 | -0.31 | |||
17 | AT3G60810 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 444 Blast hits to 444 proteins in 143 species: Archae - 0; Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). |
-0.72 | 0.3 | -0.35 | |||
18 | AT5G65840 | Thioredoxin superfamily protein | -0.72 | 0.3 | -0.3 | |||
19 | AT2G42740 | ribosomal protein large subunit 16A | ribosomal protein large subunit 16A |
0.72 | 0.31 | -0.31 | ||
20 | AT4G16120 | COBRA-like protein-7 precursor | ARABIDOPSIS THALIANA SEC61 BETA 1, COBRA-like protein-7 precursor, SEC61 BETA 1 |
0.72 | 0.29 | -0.3 | ||
21 | AT5G38895 | RING/U-box superfamily protein | -0.72 | 0.32 | -0.3 | |||
22 | AT2G29980 | fatty acid desaturase 3 | AtFAD3, fatty acid desaturase 3 | 0.72 | 0.33 | -0.29 | ||
23 | AT5G51120 | polyadenylate-binding protein 1 | POLYADENYLATE-BINDING PROTEIN 1, polyadenylate-binding protein 1 |
0.71 | 0.33 | -0.33 | ||
24 | AT2G37510 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.71 | 0.31 | -0.31 | |||
25 | AT3G49580 | response to low sulfur 1 | RESPONSE TO LOW SULFUR 1 | -0.71 | 0.3 | -0.3 | ||
26 | AT2G40660 | Nucleic acid-binding, OB-fold-like protein | 0.71 | 0.32 | -0.32 | |||
27 | AT1G73740 | UDP-Glycosyltransferase superfamily protein | -0.71 | 0.3 | -0.35 | |||
28 | AT1G03830 | guanylate-binding family protein | 0.7 | 0.33 | -0.29 | |||
29 | AT1G20410 | Pseudouridine synthase family protein | 0.7 | 0.32 | -0.32 | |||
30 | AT2G22240 | myo-inositol-1-phosphate synthase 2 | INOSITOL 3-PHOSPHATE SYNTHASE 2, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2, myo-inositol-1-phosphate synthase 2 |
-0.7 | 0.32 | -0.31 | ||
31 | AT2G28190 | copper/zinc superoxide dismutase 2 | copper/zinc superoxide dismutase 2, COPPER/ZINC SUPEROXIDE DISMUTASE 2 |
0.7 | 0.32 | -0.33 | ||
32 | AT5G53980 | homeobox protein 52 | homeobox protein 52, homeobox protein 52 |
0.7 | 0.35 | -0.3 | ||
33 | AT1G29980 | Protein of unknown function, DUF642 | 0.7 | 0.33 | -0.31 | |||
34 | AT4G19960 | K+ uptake permease 9 | ATKUP9, HAK9, KT9, K+ uptake permease 9 |
-0.7 | 0.32 | -0.31 | ||
35 | AT5G17930 | MIF4G domain-containing protein / MA3 domain-containing protein |
0.7 | 0.3 | -0.32 | |||
36 | AT4G37000 | accelerated cell death 2 (ACD2) | ACCELERATED CELL DEATH 2, ARABIDOPSIS THALIANA RED CHLOROPHYLL CATABOLITE REDUCTASE |
-0.7 | 0.32 | -0.34 | ||
37 | AT5G40670 | PQ-loop repeat family protein / transmembrane family protein |
-0.69 | 0.32 | -0.32 | |||
38 | AT5G13550 | sulfate transporter 4.1 | sulfate transporter 4.1 | -0.69 | 0.33 | -0.34 | ||
39 | AT5G37670 | HSP20-like chaperones superfamily protein | -0.69 | 0.32 | -0.34 | |||
40 | AT4G26160 | atypical CYS HIS rich thioredoxin 1 | atypical CYS HIS rich thioredoxin 1 |
-0.69 | 0.32 | -0.31 | ||
41 | AT2G20740 | Tetraspanin family protein | -0.69 | 0.31 | -0.3 | |||
42 | AT2G36970 | UDP-Glycosyltransferase superfamily protein | -0.69 | 0.31 | -0.29 | |||
43 | AT3G10420 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
SEEDLING PLASTID DEVELOPMENT 1 | -0.68 | 0.31 | -0.33 | ||
44 | AT3G48970 | Heavy metal transport/detoxification superfamily protein | 0.68 | 0.31 | -0.3 | |||
45 | AT3G10410 | SERINE CARBOXYPEPTIDASE-LIKE 49 | CARBOXYPEPTIDASE Y, SERINE CARBOXYPEPTIDASE-LIKE 49 |
-0.68 | 0.34 | -0.3 | ||
46 | AT1G56710 | Pectin lyase-like superfamily protein | -0.68 | 0.34 | -0.3 | |||
47 | AT5G67210 | Protein of unknown function (DUF579) | IRX15-LIKE | -0.68 | 0.32 | -0.33 | ||
48 | AT5G05930 | guanylyl cyclase 1 | ARABIDOPSIS GUANYLYL CYCLASE 1, guanylyl cyclase 1 |
-0.68 | 0.3 | -0.33 | ||
49 | AT4G21470 | riboflavin kinase/FMN hydrolase | riboflavin kinase/FMN hydrolase, riboflavin kinase/FMN hydrolase |
-0.68 | 0.32 | -0.31 | ||
50 | AT1G36370 | serine hydroxymethyltransferase 7 | serine hydroxymethyltransferase 7 | -0.68 | 0.3 | -0.34 | ||
51 | AT2G40435 | BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.33 | -0.32 | |||
52 | AT1G18870 | isochorismate synthase 2 | ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, isochorismate synthase 2 |
-0.67 | 0.31 | -0.3 | ||
53 | AT4G30810 | serine carboxypeptidase-like 29 | serine carboxypeptidase-like 29 | -0.67 | 0.33 | -0.3 | ||
54 | AT5G20900 | jasmonate-zim-domain protein 12 | jasmonate-zim-domain protein 12, TIFY3B |
-0.67 | 0.29 | -0.3 | ||
55 | AT3G22780 | Tesmin/TSO1-like CXC domain-containing protein | ATTSO1, CHINESE FOR 'UGLY' | 0.67 | 0.27 | -0.32 | ||
56 | AT4G01070 | UDP-Glycosyltransferase superfamily protein | GT72B1, UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1 |
-0.67 | 0.32 | -0.3 | ||
57 | AT1G29390 | cold regulated 314 thylakoid membrane 2 | cold regulated 314 thylakoid membrane 2, COLD REGULATED 314 INNER MEMBRANE 2 |
-0.67 | 0.31 | -0.33 | ||
58 | AT2G38740 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.67 | 0.31 | -0.32 | |||
59 | AT5G01820 | serine/threonine protein kinase 1 | ATCIPK14, serine/threonine protein kinase 1, CBL-INTERACTING PROTEIN KINASE 14, SOS2-like protein kinase 24, SNF1-RELATED PROTEIN KINASE 3.15, serine/threonine protein kinase 1 |
-0.67 | 0.32 | -0.32 | ||
60 | AT2G24420 | DNA repair ATPase-related | -0.65 | 0.32 | -0.29 | |||
61 | AT3G10210 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein |
-0.65 | 0.34 | -0.33 | |||
62 | AT1G61660 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.65 | 0.34 | -0.3 | |||
63 | AT1G78140 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.65 | 0.33 | -0.31 | |||
64 | AT5G58670 | phospholipase C1 | ARABIDOPSIS THALIANA PHOSPHOLIPASE C, phospholipase C1, phospholipase C 1, phospholipase C1 |
-0.65 | 0.31 | -0.31 | ||
65 | AT1G06650 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.65 | 0.31 | -0.3 | |||
66 | AT1G10500 | chloroplast-localized ISCA-like protein | chloroplast-localized ISCA-like protein, chloroplast-localized ISCA-like protein |
-0.65 | 0.31 | -0.29 |