AT3G54690 : SETH3
Query Information
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AGICode AT3G54690
Description Sugar isomerase (SIS) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G54690 Sugar isomerase (SIS) family protein SETH3 1 0.3 -0.31
2 AT3G11700 FASCICLIN-like arabinogalactan protein 18 precursor FASCICLIN-like arabinogalactan
protein 18 precursor		 0.86 0.3 -0.33
3 AT1G33240 GT-2-like 1 GT2-LIKE 1, GT-2-like 1 0.82 0.31 -0.31
4 AT1G05850 Chitinase family protein ATCTL1, CHITINASE-LIKE PROTEIN 1,
ECTOPIC DEPOSITION OF LIGNIN IN
PITH, ECTOPIC DEPOSITION OF LIGNIN
IN PITH 1, ECTOPIC ROOT HAIR 2,
SENSITIVE TO HOT TEMPERATURES 2,
POM-POM1		 0.82 0.31 -0.29
5 AT2G28430 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.32 -0.32
6 AT1G76670 Nucleotide-sugar transporter family protein 0.78 0.32 -0.3
7 AT3G44540 fatty acid reductase 4 fatty acid reductase 4 -0.78 0.34 -0.32
8 AT3G21200 proton gradient regulation 7 proton gradient regulation 7 0.77 0.3 -0.33
9 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 0.77 0.32 -0.31
10 AT1G45170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits
to 62 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.31 -0.33
11 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein 0.76 0.31 -0.32
12 AT5G14180 Myzus persicae-induced lipase 1 Myzus persicae-induced lipase 1 -0.75 0.32 -0.33
13 AT5G10700 Peptidyl-tRNA hydrolase II (PTH2) family protein 0.75 0.32 -0.32
14 AT1G30540 Actin-like ATPase superfamily protein 0.75 0.29 -0.33
15 AT3G13490 Lysyl-tRNA synthetase, class II ARABIDOPSIS THALIANA LYSYL-TRNA
SYNTHETASE 2, OVULE ABORTION 5		 0.75 0.32 -0.31
16 AT2G21170 triosephosphate isomerase PLASTID ISOFORM TRIOSE PHOSPHATE
ISOMERASE, triosephosphate
isomerase		 0.75 0.31 -0.31
17 AT2G35880 TPX2 (targeting protein for Xklp2) protein family 0.74 0.31 -0.31
18 AT1G80080 Leucine-rich repeat (LRR) family protein Receptor Like Protein 17, TOO MANY
MOUTHS		 0.74 0.33 -0.31
19 AT1G08510 fatty acyl-ACP thioesterases B fatty acyl-ACP thioesterases B 0.74 0.33 -0.33
20 AT3G06060 NAD(P)-binding Rossmann-fold superfamily protein TSC10A 0.74 0.32 -0.3
21 AT3G58550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.73 0.31 -0.3
22 AT3G13800 Metallo-hydrolase/oxidoreductase superfamily protein 0.73 0.32 -0.31
23 AT1G36320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits
to 90 proteins in 22 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 0.73 0.3 -0.3
24 AT5G60920 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA 0.73 0.32 -0.32
25 AT1G66150 transmembrane kinase 1 transmembrane kinase 1 0.73 0.31 -0.32
26 AT5G49170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G06840.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.73 0.3 -0.3
27 AT5G14080 Tetratricopeptide repeat (TPR)-like superfamily protein -0.73 0.31 -0.3
28 AT1G54060 6B-interacting protein 1-like 1 6B-interacting protein 1-like 1 0.72 0.32 -0.32
29 AT1G80500 SNARE-like superfamily protein 0.72 0.31 -0.3
30 AT5G45540 Protein of unknown function (DUF594) 0.72 0.33 -0.3
31 AT1G10670 ATP-citrate lyase A-1 ATP-citrate lyase A-1 0.72 0.33 -0.31
32 AT1G78030 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function (duplicated DUF1399)
(TAIR:AT4G37900.1); Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.72 0.32 -0.3
33 AT1G22790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast
hits to 67 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.31 -0.3
34 AT5G56490 D-arabinono-1,4-lactone oxidase family protein 0.71 0.31 -0.33
35 AT3G27210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25
species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7;
Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source:
NCBI BLink).		 -0.71 0.34 -0.3
36 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.71 0.33 -0.31
37 AT1G49590 C2H2 and C2HC zinc fingers superfamily protein 0.71 0.33 -0.33
38 AT5G09530 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 1,
proline-rich protein 10		 -0.71 0.34 -0.33
39 AT4G14360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.71 0.31 -0.33
40 AT2G19790 SNARE-like superfamily protein 0.71 0.32 -0.31
41 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein -0.71 0.31 -0.32
42 AT5G57810 tetraspanin15 tetraspanin15 -0.71 0.32 -0.31
43 AT2G44740 cyclin p4;1 cyclin p4;1 0.71 0.31 -0.33
44 AT5G64813 Ras-related small GTP-binding family protein Light Insensitive Period1 0.71 0.31 -0.31
45 AT4G27430 COP1-interacting protein 7 COP1-interacting protein 7 0.7 0.31 -0.31
46 AT1G61810 beta-glucosidase 45 beta-glucosidase 45 -0.7 0.32 -0.32
47 AT1G52910 Protein of unknown function (DUF1218) 0.7 0.32 -0.31
48 AT2G01580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits
to 129 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.29 -0.29
49 AT1G20400 Protein of unknown function (DUF1204) 0.7 0.31 -0.32
50 AT3G52290 IQ-domain 3 IQ-domain 3 0.7 0.32 -0.31
51 AT3G62660 galacturonosyltransferase-like 7 galacturonosyltransferase-like 7 0.7 0.31 -0.33
52 AT3G12020 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.31 -0.31
53 AT1G80820 cinnamoyl coa reductase ATCCR2, cinnamoyl coa reductase -0.69 0.31 -0.33
54 AT4G22580 Exostosin family protein 0.69 0.31 -0.34
55 AT3G24310 myb domain protein 305 MYB DOMAIN PROTEIN 71, myb domain
protein 305		 -0.69 0.32 -0.32
56 AT1G33811 GDSL-like Lipase/Acylhydrolase superfamily protein 0.69 0.3 -0.31
57 AT1G19830 SAUR-like auxin-responsive protein family 0.69 0.32 -0.32
58 AT1G06060 LisH and RanBPM domains containing protein 0.69 0.33 -0.28
59 AT1G04220 3-ketoacyl-CoA synthase 2 3-ketoacyl-CoA synthase 2 -0.69 0.31 -0.33
60 AT1G15370 SNARE-like superfamily protein 0.69 0.33 -0.34
61 AT5G11280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.69 0.31 -0.31
62 AT5G57850 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 0.69 0.29 -0.33
63 AT2G17265 homoserine kinase DOWNY MILDEW RESISTANT 1,
homoserine kinase		 0.69 0.31 -0.32
64 AT2G36270 Basic-leucine zipper (bZIP) transcription factor family
protein		 ABA INSENSITIVE 5,
GROWTH-INSENSITIVITY TO ABA 1		 -0.68 0.32 -0.32
65 AT4G26170 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F
mature embryo stage, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.68 0.33 -0.32
66 AT1G12850 Phosphoglycerate mutase family protein 0.68 0.31 -0.31
67 AT4G18460 D-Tyr-tRNA(Tyr) deacylase family protein 0.68 0.31 -0.34
68 AT4G10840 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.32 -0.33
69 AT5G63560 HXXXD-type acyl-transferase family protein -0.68 0.34 -0.29
70 AT1G64980 Nucleotide-diphospho-sugar transferases superfamily protein 0.68 0.3 -0.33
71 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3		 0.68 0.31 -0.31
72 AT2G39710 Eukaryotic aspartyl protease family protein -0.68 0.33 -0.32
73 AT4G12060 Double Clp-N motif protein 0.67 0.35 -0.32
74 AT1G56590 Clathrin adaptor complexes medium subunit family protein ZIG SUPPRESSOR 4 0.67 0.33 -0.31
75 AT3G22830 heat shock transcription factor A6B ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A6B, heat
shock transcription factor A6B		 -0.67 0.32 -0.33
76 AT1G61780 postsynaptic protein-related 0.67 0.31 -0.29
77 AT4G10310 high-affinity K+ transporter 1 ATHKT1, high-affinity K+
transporter 1		 0.67 0.31 -0.35
78 AT2G18245 alpha/beta-Hydrolases superfamily protein 0.67 0.3 -0.32
79 AT1G26650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits
to 204 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.31
80 AT5G19730 Pectin lyase-like superfamily protein 0.67 0.32 -0.3
81 AT3G61130 galacturonosyltransferase 1 galacturonosyltransferase 1, LGT1 0.67 0.31 -0.32
82 AT1G30120 pyruvate dehydrogenase E1 beta pyruvate dehydrogenase E1 beta 0.67 0.3 -0.32
83 AT5G49720 glycosyl hydrolase 9A1 glycosyl hydrolase 9A1, DEFECTIVE
CYTOKINESIS, glycosyl hydrolase
9A1, IRREGULAR XYLEM 2, KORRIGAN,
KORRIGAN 1, RADIALLY SWOLLEN 2,
TUMOROUS SHOOT DEVELOPMENT 1		 0.67 0.3 -0.32
84 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 0.67 0.34 -0.34
85 AT1G24170 Nucleotide-diphospho-sugar transferases superfamily protein GALACTURONOSYLTRANSFERASE-LIKE 8,
LGT9		 0.67 0.33 -0.33
86 AT2G18370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.66 0.32 -0.31
87 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 -0.66 0.33 -0.35
88 AT2G37360 ABC-2 type transporter family protein ATP-binding cassette G2 -0.66 0.33 -0.32
89 AT4G36740 homeobox protein 40 homeobox protein 40, HB-5,
homeobox protein 40		 -0.65 0.31 -0.31
90 AT3G06390 Uncharacterised protein family (UPF0497) -0.65 0.32 -0.32
91 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 -0.65 0.3 -0.3
92 AT4G02160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61710.1); Has 35 Blast hits
to 35 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.31 -0.32
93 AT1G55740 seed imbibition 1 seed imbibition 1, raffinose
synthase 1, seed imbibition 1		 -0.65 0.31 -0.31
94 AT1G07500 unknown protein; Has 4 Blast hits to 4 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.33 -0.31
95 AT5G53890 phytosylfokine-alpha receptor 2 AtPSKR2, phytosylfokine-alpha
receptor 2		 -0.64 0.3 -0.32
96 AT1G55610 BRI1 like BRI1 like -0.64 0.3 -0.3
97 AT1G54540 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.64 0.32 -0.31
98 AT1G69600 zinc finger homeodomain 1 ARABIDOPSIS THALIANA HOMEOBOX
PROTEIN 29, zinc finger
homeodomain 1, ZINC FINGER
HOMEODOMAIN 11		 -0.63 0.31 -0.33
99 AT5G49520 WRKY DNA-binding protein 48 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 48, WRKY
DNA-binding protein 48		 -0.63 0.31 -0.32
100 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 -0.63 0.3 -0.29
101 AT4G00960 Protein kinase superfamily protein -0.62 0.3 -0.35
102 AT3G11050 ferritin 2 ferritin 2, ferritin 2 -0.61 0.33 -0.32
103 AT3G18400 NAC domain containing protein 58 NAC domain containing protein 58,
NAC domain containing protein 58		 -0.61 0.3 -0.33
104 AT4G22680 myb domain protein 85 myb domain protein 85, myb domain
protein 85		 -0.61 0.33 -0.3
105 AT4G36430 Peroxidase superfamily protein -0.61 0.32 -0.3
106 AT4G36260 Lateral root primordium (LRP) protein-related SHI RELATED SEQUENCE 2, STYLISH 2 -0.61 0.31 -0.3
107 AT2G31990 Exostosin family protein -0.61 0.32 -0.3
108 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 DEI1, PASTICCINO 1 -0.61 0.31 -0.32
109 AT2G03200 Eukaryotic aspartyl protease family protein -0.61 0.33 -0.32
110 AT2G35920 RNA helicase family protein -0.6 0.31 -0.31
111 AT4G30030 Eukaryotic aspartyl protease family protein -0.6 0.33 -0.3
112 AT1G37150 holocarboxylase synthetase 2 holocarboxylase synthetase 2 -0.6 0.32 -0.32
113 AT5G49350 Glycine-rich protein family -0.6 0.3 -0.32
114 AT5G59700 Protein kinase superfamily protein -0.6 0.3 -0.31
115 AT1G24430 HXXXD-type acyl-transferase family protein -0.6 0.32 -0.31
116 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.6 0.32 -0.32
117 AT1G45616 receptor like protein 6 receptor like protein 6, receptor
like protein 6		 -0.59 0.3 -0.32
118 AT3G50400 GDSL-like Lipase/Acylhydrolase superfamily protein -0.59 0.33 -0.32
119 AT3G48920 myb domain protein 45 myb domain protein 45, myb domain
protein 45		 -0.59 0.3 -0.32
120 AT3G46500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.59 0.31 -0.3
121 AT2G48140 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 embryo sac development arrest 4 -0.59 0.31 -0.31
122 AT3G10100 transposable element gene -0.59 0.32 -0.34
123 AT4G19810 Glycosyl hydrolase family protein with chitinase insertion
domain		 class V chitinase -0.59 0.32 -0.33
124 AT2G22510 hydroxyproline-rich glycoprotein family protein -0.58 0.33 -0.33
125 AT5G09480 hydroxyproline-rich glycoprotein family protein -0.58 0.34 -0.33
126 AT2G17430 Seven transmembrane MLO family protein ATMLO7, MILDEW RESISTANCE LOCUS O
7, NORTIA		 -0.58 0.29 -0.32
127 AT1G08430 aluminum-activated malate transporter 1 aluminum-activated malate
transporter 1, ARABIDOPSIS
THALIANA ALUMINUM-ACTIVATED MALATE
TRANSPORTER 1		 -0.58 0.33 -0.31
128 AT1G53540 HSP20-like chaperones superfamily protein -0.58 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
129 C0231 Serine D,L-Serine D-Serine; L-Serine sphingolipid biosynthesis (plants),
folate polyglutamylation,
tryptophan biosynthesis,
phospholipid biosynthesis II,
homocysteine and cysteine interconversion,
photorespiration,
seleno-amino acid biosynthesis,
glycine biosynthesis,
tRNA charging,
serine racemization,
phosphatidylethanolamine biosynthesis I,
serine biosynthesis,
choline biosynthesis I,
cysteine biosynthesis I,
folate transformations II 		-0.64 0.3 -0.31 C0231