AT3G54200 : -
Query Information
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AGICode AT3G54200
Description Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G54200 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 1 0.33 -0.32
2 AT5G42050 DCD (Development and Cell Death) domain protein 0.84 0.31 -0.32
3 AT1G01720 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 2, ATAF1		 0.83 0.3 -0.35
4 AT5G62020 heat shock transcription factor B2A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR B2A, heat
shock transcription factor B2A		 0.82 0.33 -0.3
5 AT5G66650 Protein of unknown function (DUF607) 0.81 0.3 -0.3
6 AT3G13310 Chaperone DnaJ-domain superfamily protein 0.81 0.32 -0.32
7 AT2G37860 Protein of unknown function (DUF3411) LOWER CELL DENSITY 1 -0.8 0.33 -0.33
8 AT3G15850 fatty acid desaturase 5 ADS3, fatty acid desaturase 5,
FATTY ACID DESATURASE B, JB67		 -0.79 0.31 -0.33
9 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.79 0.31 -0.32
10 AT3G62110 Pectin lyase-like superfamily protein -0.79 0.31 -0.3
11 AT5G41070 dsRNA-binding protein 5 dsRNA-binding protein 5 0.78 0.31 -0.31
12 AT5G44900 Toll-Interleukin-Resistance (TIR) domain family protein -0.77 0.3 -0.31
13 AT4G25050 acyl carrier protein 4 acyl carrier protein 4 -0.77 0.32 -0.33
14 AT3G02450 cell division protein ftsH, putative -0.77 0.32 -0.3
15 AT4G37540 LOB domain-containing protein 39 LOB domain-containing protein 39 -0.77 0.3 -0.31
16 AT2G28400 Protein of unknown function, DUF584 0.77 0.3 -0.32
17 AT5G15740 O-fucosyltransferase family protein -0.77 0.32 -0.32
18 AT4G31550 WRKY DNA-binding protein 11 ATWRKY11, WRKY DNA-binding protein
11		 0.77 0.31 -0.32
19 AT1G63840 RING/U-box superfamily protein 0.77 0.32 -0.3
20 AT3G48520 cytochrome P450, family 94, subfamily B, polypeptide 3 cytochrome P450, family 94,
subfamily B, polypeptide 3		 0.77 0.32 -0.3
21 AT3G58610 ketol-acid reductoisomerase -0.76 0.3 -0.31
22 AT1G73110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.76 0.32 -0.32
23 AT1G05700 Leucine-rich repeat transmembrane protein kinase protein -0.76 0.31 -0.33
24 AT2G17990 BEST Arabidopsis thaliana protein match is:
kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to
6129 proteins in 783 species: Archae - 220; Bacteria -
1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses -
38; Other Eukaryotes - 1653 (source: NCBI BLink).		 0.76 0.31 -0.31
25 AT1G68910 WPP domain-interacting protein 2 WPP domain-interacting protein 2 0.76 0.32 -0.3
26 AT4G02360 Protein of unknown function, DUF538 0.76 0.31 -0.31
27 AT1G21600 plastid transcriptionally active 6 plastid transcriptionally active 6 -0.76 0.34 -0.33
28 AT5G22630 arogenate dehydratase 5 arogenate dehydratase 5 0.76 0.35 -0.31
29 AT1G77450 NAC domain containing protein 32 NAC domain containing protein 32,
NAC domain containing protein 32		 0.75 0.31 -0.33
30 AT1G65470 chromatin assembly factor-1 (FASCIATA1) (FAS1) FASCIATA 1, NUCLEOSOME/CHROMATIN
ASSEMBLY FACTOR GROUP B		 -0.75 0.32 -0.31
31 AT3G21300 RNA methyltransferase family protein -0.75 0.34 -0.31
32 AT1G53520 Chalcone-flavanone isomerase family protein -0.75 0.32 -0.3
33 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 0.75 0.31 -0.3
34 AT5G05420 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.75 0.32 -0.33
35 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 -0.75 0.31 -0.31
36 AT3G26710 cofactor assembly of complex C cofactor assembly of complex C -0.75 0.32 -0.3
37 AT5G17850 Sodium/calcium exchanger family protein 0.75 0.3 -0.3
38 AT4G11460 cysteine-rich RLK (RECEPTOR-like protein kinase) 30 cysteine-rich RLK (RECEPTOR-like
protein kinase) 30		 -0.75 0.31 -0.33
39 AT3G54680 proteophosphoglycan-related 0.74 0.33 -0.29
40 AT4G02280 sucrose synthase 3 ATSUS3, sucrose synthase 3 0.74 0.33 -0.29
41 AT5G44130 FASCICLIN-like arabinogalactan protein 13 precursor FASCICLIN-like arabinogalactan
protein 13 precursor		 -0.74 0.3 -0.32
42 AT1G31130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in
29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi -
0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.74 0.31 -0.34
43 AT3G48020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.28 -0.32
44 AT3G56880 VQ motif-containing protein 0.74 0.33 -0.33
45 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein -0.74 0.33 -0.32
46 AT2G36220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52710.1); Has 74 Blast hits
to 74 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.3 -0.33
47 AT3G21390 Mitochondrial substrate carrier family protein -0.74 0.31 -0.3
48 AT5G61000 Replication factor-A protein 1-related ATRPA70D, RPA70D -0.74 0.31 -0.32
49 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.74 0.32 -0.3
50 AT4G13770 cytochrome P450, family 83, subfamily A, polypeptide 1 cytochrome P450, family 83,
subfamily A, polypeptide 1,
REDUCED EPIDERMAL FLUORESCENCE 2		 -0.74 0.32 -0.31
51 AT2G26080 glycine decarboxylase P-protein 2 glycine decarboxylase P-protein 2,
glycine decarboxylase P-protein 2		 -0.74 0.32 -0.3
52 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 -0.74 0.33 -0.3
53 AT3G49680 branched-chain aminotransferase 3 ATBCAT-3, branched-chain
aminotransferase 3		 -0.74 0.32 -0.32
54 AT4G25740 RNA binding Plectin/S10 domain-containing protein -0.74 0.33 -0.32
55 AT3G54750 unknown protein; Has 145 Blast hits to 145 proteins in 60
species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.74 0.32 -0.32
56 AT1G19800 trigalactosyldiacylglycerol 1 ATP-binding cassette I14,
trigalactosyldiacylglycerol 1		 -0.74 0.32 -0.32
57 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.73 0.33 -0.31
58 AT1G16390 organic cation/carnitine transporter 3 organic cation/carnitine
transporter 3, organic
cation/carnitine transporter 3		 -0.73 0.33 -0.32
59 AT5G04230 phenyl alanine ammonia-lyase 3 ATPAL3, phenyl alanine
ammonia-lyase 3		 -0.73 0.32 -0.31
60 AT2G25460 CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane
targeting (InterPro:IPR000008); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G04860.1); Has
108 Blast hits to 69 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.3 -0.33
61 AT3G62050 Putative endonuclease or glycosyl hydrolase -0.73 0.33 -0.3
62 AT1G01300 Eukaryotic aspartyl protease family protein -0.73 0.31 -0.32
63 AT1G20020 ferredoxin-NADP(+)-oxidoreductase 2 LEAF FNR 2,
ferredoxin-NADP(+)-oxidoreductase
2		 -0.73 0.31 -0.32
64 AT5G55260 protein phosphatase X 2 PROTEIN PHOSPHATASE X -2, protein
phosphatase X 2		 -0.73 0.32 -0.32
65 AT1G80050 adenine phosphoribosyl transferase 2 adenine phosphoribosyl transferase
2, ATAPT2, PHT1.1		 -0.73 0.3 -0.33
66 AT2G02370 SNARE associated Golgi protein family 0.73 0.32 -0.31
67 AT5G22580 Stress responsive A/B Barrel Domain -0.73 0.31 -0.34
68 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 -0.73 0.31 -0.31
69 AT4G34730 ribosome-binding factor A family protein -0.72 0.34 -0.32
70 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 0.72 0.31 -0.32
71 AT5G10910 mraW methylase family protein -0.72 0.31 -0.31
72 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.72 0.34 -0.32
73 AT1G13640 Phosphatidylinositol 3- and 4-kinase family protein -0.72 0.3 -0.33
74 AT5G02830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.72 0.31 -0.32
75 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 -0.72 0.32 -0.3
76 AT5G02170 Transmembrane amino acid transporter family protein 0.72 0.32 -0.33
77 AT2G41980 Protein with RING/U-box and TRAF-like domains -0.72 0.3 -0.3
78 AT5G15200 Ribosomal protein S4 -0.72 0.34 -0.3
79 AT5G47070 Protein kinase superfamily protein 0.72 0.3 -0.31
80 AT2G17972 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 14 growth stages;
Has 34 Blast hits to 34 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.31 -0.31
81 AT5G49280 hydroxyproline-rich glycoprotein family protein 0.72 0.32 -0.33
82 AT2G04530 Metallo-hydrolase/oxidoreductase superfamily protein CPZ, TRNASE Z 2 -0.72 0.31 -0.33
83 AT5G52650 RNA binding Plectin/S10 domain-containing protein -0.72 0.31 -0.33
84 AT1G51100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 26
Blast hits to 26 proteins in 9 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.32 -0.33
85 AT2G40150 TRICHOME BIREFRINGENCE-LIKE 28 TRICHOME BIREFRINGENCE-LIKE 28 -0.72 0.32 -0.33
86 AT5G06860 polygalacturonase inhibiting protein 1 POLYGALACTURONASE INHIBITING
PROTEIN 1, polygalacturonase
inhibiting protein 1		 0.72 0.32 -0.32
87 AT2G01180 phosphatidic acid phosphatase 1 ATLPP1, phosphatidic acid
phosphatase 1, LIPID PHOSPHATE
PHOSPHATASE 1, phosphatidic acid
phosphatase 1		 0.72 0.3 -0.31
88 AT2G37460 nodulin MtN21 /EamA-like transporter family protein -0.72 0.33 -0.29
89 AT1G70530 cysteine-rich RLK (RECEPTOR-like protein kinase) 3 cysteine-rich RLK (RECEPTOR-like
protein kinase) 3		 0.72 0.31 -0.31
90 AT2G37470 Histone superfamily protein -0.72 0.33 -0.31
91 AT3G27640 Transducin/WD40 repeat-like superfamily protein -0.72 0.31 -0.3
92 AT5G35490 mto 1 responding up 1 ARABIDOPSIS MTO 1 RESPONDING UP 1,
MTO 1 RESPONDING UP 1		 -0.72 0.29 -0.3
93 AT4G24700 unknown protein; Has 20 Blast hits to 20 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.33 -0.3
94 AT3G06840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49170.1); Has 33 Blast hits
to 33 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.31 -0.31
95 AT3G53430 Ribosomal protein L11 family protein -0.71 0.31 -0.3
96 AT3G11510 Ribosomal protein S11 family protein -0.71 0.33 -0.33
97 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 -0.71 0.32 -0.32
98 AT5G63100 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.71 0.32 -0.31
99 AT5G04760 Duplicated homeodomain-like superfamily protein 0.71 0.34 -0.33
100 AT3G49590 Autophagy-related protein 13 autophagy-related 13 0.71 0.3 -0.32
101 AT2G02020 Major facilitator superfamily protein AtPTR4, peptide transporter 4 -0.71 0.32 -0.28
102 AT1G48240 novel plant snare 12 ATNPSN12, novel plant snare 12 -0.71 0.33 -0.32
103 AT5G20850 RAS associated with diabetes protein 51 RAS associated with diabetes
protein 51, RAS associated with
diabetes protein 51		 -0.71 0.3 -0.32
104 AT3G16180 Major facilitator superfamily protein -0.71 0.33 -0.31
105 AT3G63110 isopentenyltransferase 3 isopentenyltransferase 3,
isopentenyltransferase 3		 -0.71 0.31 -0.31
106 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 -0.71 0.31 -0.32
107 AT2G40290 Eukaryotic translation initiation factor 2 subunit 1 -0.71 0.3 -0.32
108 AT2G28050 Pentatricopeptide repeat (PPR) superfamily protein -0.71 0.33 -0.31
109 AT5G05410 DRE-binding protein 2A DEHYDRATION-RESPONSIVE ELEMENT
BINDING PROTEIN 2, DRE-binding
protein 2A		 0.71 0.31 -0.32
110 AT1G02390 glycerol-3-phosphate acyltransferase 2 ARABIDOPSIS THALIANA
GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 2,
glycerol-3-phosphate
acyltransferase 2		 0.7 0.32 -0.3
111 AT3G29575 ABI five binding protein 3 ABI five binding protein 3 0.7 0.31 -0.32
112 AT2G43290 Calcium-binding EF-hand family protein multicopy suppressors of snf4
deficiency in yeast 3		 0.7 0.32 -0.33
113 AT5G28510 beta glucosidase 24 beta glucosidase 24 0.7 0.32 -0.31
114 AT1G15230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 26
Blast hits to 26 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.33 -0.29
115 AT1G09960 sucrose transporter 4 SUCROSE TRANSPORTER 4, SUCROSE
TRANSPORTER 4, SUCROSE TRANSPORTER
4, sucrose transporter 4		 0.7 0.3 -0.33
116 AT4G36010 Pathogenesis-related thaumatin superfamily protein 0.69 0.32 -0.34
117 AT2G32800 protein kinase family protein AP4.3A 0.69 0.3 -0.31
118 AT5G40170 receptor like protein 54 receptor like protein 54, receptor
like protein 54		 0.69 0.31 -0.31
119 AT4G09030 arabinogalactan protein 10 arabinogalactan protein 10,
ATAGP10		 0.69 0.32 -0.32
120 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).		 0.69 0.34 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
121 C0174 MST_2370.2 - - - 0.71 0.42 -0.46