AT3G54290 : -
Query Information
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AGICode AT3G54290
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); Has 59 Blast hits to 59 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 1 0.32 -0.31
2 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.77 0.3 -0.32
3 AT2G44370 Cysteine/Histidine-rich C1 domain family protein -0.75 0.3 -0.33
4 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 -0.75 0.31 -0.33
5 AT3G19930 sugar transporter 4 SUGAR TRANSPORTER 4, sugar
transporter 4		 -0.75 0.32 -0.3
6 AT1G34130 staurosporin and temperature sensitive 3-like b staurosporin and temperature
sensitive 3-like b		 -0.74 0.32 -0.31
7 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 -0.73 0.31 -0.31
8 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 -0.73 0.33 -0.32
9 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.73 0.34 -0.33
10 AT3G57290 eukaryotic translation initiation factor 3E ATEIF3E-1, ATINT6, eukaryotic
translation initiation factor 3E,
INT-6, INT6, TIF3E1		 -0.72 0.33 -0.33
11 AT2G26440 Plant invertase/pectin methylesterase inhibitor superfamily -0.72 0.32 -0.31
12 AT5G62440 Protein of unknown function (DUF3223) -0.72 0.33 -0.31
13 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 -0.71 0.33 -0.31
14 AT5G02470 Transcription factor DP DPA -0.71 0.32 -0.32
15 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 -0.71 0.32 -0.31
16 AT3G57000 nucleolar essential protein-related -0.7 0.32 -0.31
17 AT3G10530 Transducin/WD40 repeat-like superfamily protein -0.7 0.32 -0.34
18 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 0.7 0.33 -0.31
19 AT1G79650 Rad23 UV excision repair protein family Arabidopsis thaliana aldehyde
oxidase 1, RADIATION SENSITIVE23B		 -0.7 0.31 -0.3
20 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.7 0.31 -0.3
21 AT2G44860 Ribosomal protein L24e family protein -0.69 0.32 -0.3
22 AT5G22850 Eukaryotic aspartyl protease family protein 0.69 0.3 -0.3
23 AT4G34950 Major facilitator superfamily protein -0.69 0.34 -0.3
24 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 -0.69 0.32 -0.31
25 AT5G24840 tRNA (guanine-N-7) methyltransferase -0.68 0.32 -0.32
26 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 -0.68 0.31 -0.31
27 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein -0.68 0.3 -0.33
28 AT3G22300 ribosomal protein S10 ribosomal protein S10 -0.68 0.32 -0.32
29 AT1G52200 PLAC8 family protein -0.68 0.32 -0.34
30 AT5G64670 Ribosomal protein L18e/L15 superfamily protein -0.68 0.34 -0.33
31 AT1G54380 spliceosome protein-related -0.68 0.32 -0.31
32 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 0.67 0.31 -0.29
33 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 -0.67 0.3 -0.32
34 AT3G05560 Ribosomal L22e protein family -0.67 0.32 -0.33
35 AT5G11760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1764, eukaryotic (InterPro:IPR013885);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.67 0.3 -0.31
36 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.67 0.3 -0.33
37 AT3G24740 Protein of unknown function (DUF1644) 0.67 0.32 -0.34
38 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 -0.67 0.31 -0.29
39 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.31 -0.32
40 AT5G39580 Peroxidase superfamily protein -0.66 0.33 -0.33
41 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 -0.66 0.32 -0.29
42 AT2G44120 Ribosomal protein L30/L7 family protein -0.66 0.32 -0.3
43 AT4G36670 Major facilitator superfamily protein AtPLT6, AtPMT6, polyol transporter
6, polyol/monosaccharide
transporter 6		 -0.66 0.3 -0.32
44 AT2G45710 Zinc-binding ribosomal protein family protein -0.66 0.32 -0.32
45 AT4G38350 Patched family protein 0.66 0.32 -0.33
46 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 -0.66 0.31 -0.31
47 AT3G21540 transducin family protein / WD-40 repeat family protein -0.66 0.34 -0.35
48 AT4G12470 azelaic acid induced 1 azelaic acid induced 1 -0.65 0.33 -0.33
49 AT4G16265 RNA polymerases M/15 Kd subunit NRPB9B, NRPD9B, NRPE9B -0.65 0.34 -0.3
50 AT4G12500 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.3 -0.32
51 AT5G64120 Peroxidase superfamily protein -0.65 0.31 -0.32
52 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.29
53 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog -0.65 0.32 -0.33
54 AT1G10550 xyloglucan:xyloglucosyl transferase 33 XYLOGLUCAN:XYLOGLUCOSYL
TRANSFERASE 33,
xyloglucan:xyloglucosyl
transferase 33		 -0.65 0.32 -0.31
55 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.65 0.31 -0.33
56 AT4G13850 glycine-rich RNA-binding protein 2 GLYCINE-RICH RNA-BINDING PROTEIN
2, glycine-rich RNA-binding
protein 2, glycine rich protein 2		 -0.65 0.33 -0.31
57 AT3G62940 Cysteine proteinases superfamily protein -0.65 0.33 -0.3
58 AT5G27920 F-box family protein -0.65 0.33 -0.32
59 AT1G24530 Transducin/WD40 repeat-like superfamily protein -0.65 0.33 -0.31
60 AT3G61140 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 ARABIDOPSIS THALIANA FUSCA 6,
SHAGGY-LIKE KINASE 31,
CONSTITUTIVE PHOTOMORPHOGENIC 11,
COP9 SIGNALOSOME SUBUNIT 1, EMBRYO
DEFECTIVE 78, FUSCA 6, SHAGGY-LIKE
KINASE 31		 -0.65 0.33 -0.32
61 AT5G23870 Pectinacetylesterase family protein -0.64 0.32 -0.31
62 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 0.64 0.32 -0.31
63 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 0.64 0.33 -0.31
64 AT1G79150 binding -0.64 0.32 -0.32
65 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 -0.64 0.31 -0.31
66 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.64 0.31 -0.31
67 AT4G34040 RING/U-box superfamily protein 0.64 0.3 -0.33
68 AT5G40780 lysine histidine transporter 1 lysine histidine transporter 1 -0.64 0.31 -0.32
69 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.64 0.32 -0.32
70 AT1G62790 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.3 -0.31
71 AT3G50080 VIER F-box proteine 2 VIER F-box proteine 2 0.63 0.32 -0.3
72 AT1G05300 zinc transporter 5 precursor zinc transporter 5 precursor -0.63 0.33 -0.3
73 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.63 0.31 -0.31
74 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 -0.63 0.34 -0.29
75 AT1G59940 response regulator 3 response regulator 3 -0.63 0.34 -0.32
76 AT3G21670 Major facilitator superfamily protein 0.63 0.34 -0.32
77 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.63 0.3 -0.31
78 AT2G19540 Transducin family protein / WD-40 repeat family protein -0.63 0.32 -0.32
79 AT1G16730 unknown protein 6 unknown protein 6 0.63 0.27 -0.29
80 AT4G02230 Ribosomal protein L19e family protein -0.63 0.32 -0.31
81 AT5G57190 phosphatidylserine decarboxylase 2 phosphatidylserine decarboxylase 2 0.62 0.32 -0.31
82 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein 0.62 0.31 -0.31
83 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.62 0.32 -0.32
84 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE 0.61 0.32 -0.3
85 AT4G27840 SNARE-like superfamily protein 0.61 0.31 -0.3
86 AT5G62040 PEBP (phosphatidylethanolamine-binding protein) family
protein		 brother of FT and TFL1 0.6 0.32 -0.31
87 AT2G46690 SAUR-like auxin-responsive protein family 0.6 0.32 -0.31
88 AT1G78790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2008
(InterPro:IPR018552); Has 27 Blast hits to 27 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.31 -0.34
89 AT1G51340 MATE efflux family protein 0.58 0.31 -0.3
90 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 0.58 0.29 -0.32
91 AT2G37590 DNA binding with one finger 2.4 ATDOF2.4, DNA binding with one
finger 2.4		 0.58 0.31 -0.32
92 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 0.58 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
93 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) 0.59 0.33 -0.32 C0142