AT3G54130 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G54130
Description Josephin family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G54130 Josephin family protein 1 0.32 -0.3
2 AT2G23940 Protein of unknown function (DUF788) 0.69 0.31 -0.32
3 AT1G22275 Myosin heavy chain-related protein ZYP1, ZYP1b -0.69 0.32 -0.34
4 AT5G16760 Inositol 1,3,4-trisphosphate 5/6-kinase family protein Arabidopsis thaliana inositol
(1,3,4) P3 5/6-kinase 1, inositol
(1,3,4) P3 5/6-kinase 1		 0.68 0.31 -0.35
5 AT3G27770 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G62960.1); Has 158 Blast hits to 157 proteins in
21 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi -
0; Plants - 141; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.68 0.3 -0.33
6 AT4G32620 Enhancer of polycomb-like transcription factor protein -0.67 0.32 -0.32
7 AT5G05850 plant intracellular ras group-related LRR 1 plant intracellular ras
group-related LRR 1		 0.66 0.34 -0.31
8 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 -0.66 0.34 -0.28
9 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E -0.66 0.31 -0.31
10 AT3G12030 Protein of unknown function DUF106, transmembrane 0.66 0.33 -0.32
11 AT1G71780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.65 0.32 -0.33
12 AT3G26870 Plant self-incompatibility protein S1 family -0.65 0.31 -0.31
13 AT3G01640 glucuronokinase G ARABIDOPSIS THALIANA
GLUCURONOKINASE, glucuronokinase G		 0.64 0.3 -0.32
14 AT1G55550 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.33 -0.3
15 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.64 0.31 -0.33
16 AT5G14470 GHMP kinase family protein 0.64 0.32 -0.32
17 AT3G59100 glucan synthase-like 11 glucan synthase-like 11, gsl11,
glucan synthase-like 11		 -0.64 0.32 -0.33
18 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 0.64 0.32 -0.32
19 AT3G47800 Galactose mutarotase-like superfamily protein 0.63 0.32 -0.3
20 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 0.63 0.29 -0.32
21 AT1G66680 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AR401 0.63 0.32 -0.34
22 AT4G17640 casein kinase II beta chain 2 casein kinase II beta chain 2 0.63 0.32 -0.3
23 AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B 0.62 0.31 -0.32
24 AT5G26700 RmlC-like cupins superfamily protein -0.62 0.31 -0.31
25 AT3G17090 Protein phosphatase 2C family protein 0.62 0.31 -0.31
26 AT5G35420 transposable element gene -0.61 0.32 -0.33
27 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 -0.61 0.29 -0.33
28 AT1G64450 Glycine-rich protein family -0.61 0.29 -0.31
29 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 0.61 0.32 -0.3
30 AT5G02740 Ribosomal protein S24e family protein 0.61 0.32 -0.32
31 AT4G10260 pfkB-like carbohydrate kinase family protein -0.61 0.3 -0.32
32 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 -0.6 0.31 -0.29
33 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.3
34 AT1G13200 F-box and associated interaction domains-containing protein -0.6 0.32 -0.31
35 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.31
36 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2		 -0.6 0.31 -0.31
37 AT5G19830 Peptidyl-tRNA hydrolase family protein 0.59 0.34 -0.31
38 AT3G58630 sequence-specific DNA binding transcription factors 0.59 0.3 -0.32
39 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 -0.59 0.29 -0.3
40 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.3 -0.32
41 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 -0.59 0.31 -0.31
42 AT4G03770 transposable element gene 0.59 0.32 -0.32
43 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 0.59 0.3 -0.31
44 AT5G26140 Putative lysine decarboxylase family protein ATLOG9, LONELY GUY 9 0.58 0.29 -0.3
45 AT3G06190 BTB-POZ and MATH domain 2 BTB-POZ AND MATH DOMAIN 2, BTB-POZ
and MATH domain 2		 0.58 0.32 -0.31
46 AT5G55670 RNA-binding (RRM/RBD/RNP motifs) family protein -0.57 0.31 -0.31
47 AT1G64320 myosin heavy chain-related -0.57 0.3 -0.32
48 AT3G31920 transposable element gene -0.57 0.31 -0.34
49 AT2G23210 UDP-Glycosyltransferase superfamily protein -0.57 0.3 -0.33
50 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.56 0.31 -0.31
51 AT5G42170 SGNH hydrolase-type esterase superfamily protein -0.56 0.31 -0.34
52 AT5G29040 pseudogene, hypothetical protein -0.56 0.32 -0.31
53 AT5G65480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G38060.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.55 0.31 -0.31
54 AT5G64530 xylem NAC domain 1 Arabidopsis NAC domain containing
protein 104, xylem NAC domain 1		 -0.54 0.31 -0.32
55 AT1G03550 Secretory carrier membrane protein (SCAMP) family protein -0.54 0.33 -0.32
56 AT1G30010 Intron maturase, type II family protein -0.54 0.31 -0.31
57 AT5G20390 Glycosyl hydrolase superfamily protein -0.54 0.32 -0.31
58 AT1G76880 Duplicated homeodomain-like superfamily protein -0.53 0.32 -0.3
59 AT2G31035 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol
binding protein)-related protein 1B (TAIR:AT2G31030.1); Has
7 Blast hits to 7 proteins in 2 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.34 -0.33
60 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.53 0.3 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
61 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.79 0.45 -0.47 C0136
62 C0184 MST_3110.4 - - - -0.76 0.49 -0.44
63 C0009 myo-Inositol - myo-Inositol stachyose biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
D-myo-inositol (1,4,5)-trisphosphate degradation,
galactosylcyclitol biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
phytate degradation I,
myo-inositol biosynthesis,
ajugose biosynthesis I (galactinol-dependent),
phospholipid biosynthesis II 		-0.66 0.43 -0.44 C0009
64 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis -0.65 0.46 -0.45 C0193