AT3G53820 : -
Query Information
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AGICode AT3G53820
Description C2H2 and C2HC zinc fingers superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein 1 0.33 -0.32
2 AT2G11150 transposable element gene 0.77 0.33 -0.29
3 AT3G66656 AGAMOUS-like 91 AGAMOUS-like 91 -0.76 0.33 -0.32
4 AT5G57200 ENTH/ANTH/VHS superfamily protein 0.75 0.33 -0.3
5 AT3G23800 selenium-binding protein 3 selenium-binding protein 3 0.75 0.3 -0.31
6 AT5G57720 AP2/B3-like transcriptional factor family protein 0.75 0.31 -0.31
7 AT4G11530 cysteine-rich RLK (RECEPTOR-like protein kinase) 34 cysteine-rich RLK (RECEPTOR-like
protein kinase) 34		 0.75 0.29 -0.31
8 AT4G09100 RING/U-box superfamily protein 0.74 0.32 -0.34
9 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 0.74 0.3 -0.33
10 AT5G50300 Xanthine/uracil permease family protein ARABIDOPSIS THALIANA AZA-GUANINE
RESISTANT2, AZA-GUANINE RESISTANT2		 0.74 0.3 -0.31
11 AT4G15350 cytochrome P450, family 705, subfamily A, polypeptide 2 cytochrome P450, family 705,
subfamily A, polypeptide 2		 0.74 0.3 -0.32
12 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.73 0.29 -0.32
13 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family 0.73 0.33 -0.31
14 AT1G74820 RmlC-like cupins superfamily protein 0.73 0.32 -0.29
15 AT1G50760 Aminotransferase-like, plant mobile domain family protein 0.73 0.33 -0.3
16 AT2G15750 transposable element gene 0.73 0.31 -0.34
17 AT1G33280 NAC domain containing protein 15 NAC domain containing protein 15,
BEARSKIN 1, NAC domain containing
protein 15		 0.73 0.3 -0.33
18 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.73 0.3 -0.32
19 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 0.72 0.32 -0.3
20 AT2G47150 NAD(P)-binding Rossmann-fold superfamily protein 0.72 0.31 -0.32
21 AT1G75930 extracellular lipase 6 extracellular lipase 6 -0.72 0.34 -0.29
22 AT2G24640 ubiquitin-specific protease 19 ubiquitin-specific protease 19 0.72 0.33 -0.29
23 AT1G46912 F-box associated ubiquitination effector family protein 0.72 0.31 -0.31
24 AT2G44260 Plant protein of unknown function (DUF946) -0.71 0.31 -0.31
25 AT5G36950 DegP protease 10 DegP protease 10 0.71 0.33 -0.29
26 AT4G13230 Late embryogenesis abundant protein (LEA) family protein -0.71 0.29 -0.32
27 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 0.71 0.31 -0.33
28 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 0.71 0.31 -0.33
29 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.71 0.31 -0.3
30 AT2G30840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.7 0.33 -0.32
31 AT5G30380 transposable element gene 0.7 0.31 -0.3
32 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.33 -0.32
33 AT5G60090 Protein kinase superfamily protein 0.7 0.31 -0.32
34 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.69 0.34 -0.31
35 AT5G50500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.69 0.33 -0.3
36 AT4G22130 STRUBBELIG-receptor family 8 STRUBBELIG-receptor family 8 0.69 0.3 -0.32
37 AT3G27150 Galactose oxidase/kelch repeat superfamily protein 0.68 0.31 -0.32
38 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 0.68 0.3 -0.3
39 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 0.68 0.31 -0.33
40 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.3 -0.32
41 AT3G58740 citrate synthase 1 citrate synthase 1 0.68 0.33 -0.32
42 AT5G38260 Protein kinase superfamily protein 0.68 0.34 -0.32
43 AT4G10260 pfkB-like carbohydrate kinase family protein 0.68 0.32 -0.33
44 AT2G21710 Mitochondrial transcription termination factor family
protein		 embryo defective 2219 0.67 0.32 -0.3
45 AT5G52690 Copper transport protein family -0.67 0.31 -0.33
46 AT1G79780 Uncharacterised protein family (UPF0497) 0.67 0.32 -0.31
47 AT1G05550 Protein of unknown function (DUF295) 0.67 0.3 -0.33
48 AT3G24440 Fibronectin type III domain-containing protein VIN3-LIKE 1, VERNALIZATION 5 0.67 0.32 -0.33
49 AT2G23360 Plant protein of unknown function (DUF869) 0.67 0.32 -0.32
50 AT3G52460 hydroxyproline-rich glycoprotein family protein 0.67 0.29 -0.31
51 AT4G03750 transposable element gene 0.67 0.34 -0.3
52 AT1G03100 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.33 -0.32
53 AT3G52760 Integral membrane Yip1 family protein -0.66 0.33 -0.33
54 AT5G43710 Glycosyl hydrolase family 47 protein 0.66 0.3 -0.31
55 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.31 -0.32
56 AT3G24460 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 0.66 0.33 -0.31
57 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein 0.66 0.32 -0.32
58 AT3G42820 transposable element gene 0.66 0.33 -0.32
59 AT1G30990 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.66 0.32 -0.32
60 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 -0.66 0.32 -0.31
61 AT2G41570 transposable element gene -0.66 0.34 -0.32
62 AT3G47850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 12 growth stages; Has 57 Blast hits to 57 proteins
in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12;
Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7
(source: NCBI BLink).		 -0.66 0.3 -0.3
63 AT1G69820 gamma-glutamyl transpeptidase 3 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 0.65 0.31 -0.32
64 AT3G51520 diacylglycerol acyltransferase family -0.65 0.31 -0.33
65 AT1G05770 Mannose-binding lectin superfamily protein -0.65 0.32 -0.3
66 AT1G05450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.29 -0.33
67 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 -0.65 0.3 -0.32
68 AT4G10730 Protein kinase superfamily protein -0.65 0.3 -0.31
69 AT2G42060 Cysteine/Histidine-rich C1 domain family protein 0.65 0.31 -0.32
70 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.31 -0.32
71 AT5G40820 Ataxia telangiectasia-mutated and RAD3-related ARABIDOPSIS THALIANA ATAXIA
TELANGIECTASIA-MUTATED AND
RAD3-RELATED, Ataxia
telangiectasia-mutated and
RAD3-related, ATRAD3		 0.65 0.35 -0.3
72 AT1G50340 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.65 0.31 -0.33
73 AT3G30846 transposable element gene -0.65 0.31 -0.3
74 AT3G21660 UBX domain-containing protein -0.64 0.32 -0.33
75 AT3G03510 Phototropic-responsive NPH3 family protein 0.64 0.32 -0.31
76 AT3G48900 single-stranded DNA endonuclease family protein 0.64 0.3 -0.3
77 AT5G45180 Flavin-binding monooxygenase family protein 0.64 0.32 -0.31
78 AT1G53940 GDSL-motif lipase 2 GDSL-motif lipase 2 0.64 0.31 -0.32
79 AT2G46940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits
to 141 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.33 -0.33
80 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.33 -0.34
81 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 0.64 0.31 -0.32
82 AT4G19000 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS2 (FROM
YEAST INTERACTS WITH SPT6), IWS2		 0.64 0.32 -0.33
83 AT3G56600 Protein kinase superfamily protein -0.63 0.31 -0.33
84 AT3G62160 HXXXD-type acyl-transferase family protein -0.63 0.3 -0.31
85 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase		 -0.63 0.32 -0.33
86 AT5G10810 enhancer of rudimentary protein, putative ARABIDOPSIS THALIANA ENHANCER OF
RUDIMENTARY HOMOLOGUE, ENHANCER OF
RUDIMENTARY HOMOLOGUE		 -0.63 0.3 -0.34
87 AT1G54110 Membrane fusion protein Use1 -0.63 0.33 -0.33
88 AT1G51880 root hair specific 6 root hair specific 6 -0.63 0.31 -0.32
89 AT1G32840 transposable element gene -0.63 0.31 -0.34
90 AT4G09950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.33 -0.32
91 AT1G72960 Root hair defective 3 GTP-binding protein (RHD3) -0.62 0.32 -0.31
92 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.31 -0.3
93 AT1G21510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cotyledon; Has
380 Blast hits to 286 proteins in 63 species: Archae - 0;
Bacteria - 6; Metazoa - 254; Fungi - 44; Plants - 13;
Viruses - 5; Other Eukaryotes - 58 (source: NCBI BLink).		 -0.62 0.29 -0.31
94 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).		 -0.62 0.3 -0.33
95 AT1G04650 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.32 -0.34
96 AT1G28470 NAC domain containing protein 10 NAC domain containing protein 10,
NAC domain containing protein 10,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 3		 -0.61 0.31 -0.34
97 AT5G23750 Remorin family protein -0.61 0.3 -0.32
98 AT5G51320 transposable element gene -0.61 0.31 -0.33
99 AT3G22940 F-box associated ubiquitination effector family protein -0.61 0.31 -0.32
100 AT4G00870 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.6 0.31 -0.33
101 AT3G30750 transposable element gene -0.6 0.31 -0.32
102 AT1G61410 DNA double-strand break repair and VJ recombination XRCC4 -0.6 0.33 -0.32
103 AT3G05720 importin alpha isoform 7 importin alpha isoform 7 -0.6 0.32 -0.32
104 AT3G51880 high mobility group B1 AtHMGB1, high mobility group B1,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D1		 -0.6 0.32 -0.3
105 AT5G10860 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 3 -0.6 0.33 -0.31
106 AT3G21830 SKP1-like 8 SKP1-like 8, SKP1-like 8 -0.6 0.32 -0.3
107 AT2G36710 Pectin lyase-like superfamily protein -0.59 0.32 -0.3
108 AT3G01920 DHBP synthase RibB-like alpha/beta domain -0.59 0.32 -0.33
109 AT4G32560 paramyosin-related -0.59 0.32 -0.3
110 AT4G09480 transposable element gene -0.59 0.34 -0.34
111 AT3G20190 Leucine-rich repeat protein kinase family protein -0.59 0.33 -0.31
112 AT3G22870 F-box and associated interaction domains-containing protein -0.59 0.31 -0.32
113 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 -0.59 0.34 -0.3
114 AT5G41490 F-box associated ubiquitination effector family protein -0.58 0.32 -0.3
115 AT3G56740 Ubiquitin-associated (UBA) protein -0.58 0.31 -0.31
116 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 -0.58 0.33 -0.31
117 AT1G36810 transposable element gene -0.58 0.32 -0.28
118 AT3G13720 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F3, PRA8 -0.58 0.32 -0.31
119 AT5G65590 Dof-type zinc finger DNA-binding family protein -0.58 0.31 -0.31
120 AT4G31615 Transcriptional factor B3 family protein -0.58 0.3 -0.32
121 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 -0.58 0.29 -0.31
122 AT3G24750 unknown protein; Has 25 Blast hits to 25 proteins in 12
species: Archae - 0; Bacteria - 8; Metazoa - 2; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.3 -0.32
123 AT1G11380 PLAC8 family protein -0.57 0.32 -0.31
124 AT4G07450 transposable element gene -0.57 0.32 -0.3
125 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 -0.57 0.34 -0.32
126 AT2G12900 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.57 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
127 C0145 Maltotetraose - Maltotetraose starch degradation II 0.8 0.48 -0.46 C0145
128 C0094 Galactosamine D-Galactosamine - - -0.77 0.45 -0.43
129 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		-0.76 0.46 -0.46 C0228
130 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III -0.68 0.44 -0.45 C0195
131 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		-0.63 0.46 -0.45 C0087