AT3G53840 : -
Query Information
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AGICode AT3G53840
Description Protein kinase superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G53840 Protein kinase superfamily protein 1 0.31 -0.3
2 AT5G26100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G44170.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.75 0.31 -0.32
3 AT3G06910 UB-like protease 1A AtULP1a, ESD4-LIKE SUMO PROTEASE
1, UB-like protease 1A		 0.75 0.31 -0.3
4 AT3G08560 vacuolar H+-ATPase subunit E isoform 2 vacuolar H+-ATPase subunit E
isoform 2		 -0.64 0.28 -0.33
5 AT5G55720 Pectin lyase-like superfamily protein 0.62 0.32 -0.3
6 AT1G15350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits
to 148 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.61 0.33 -0.3
7 AT3G32090 WRKY family transcription factor 0.61 0.3 -0.33
8 AT4G16890 disease resistance protein (TIR-NBS-LRR class), putative BALL, SUPPRESSOR OF NPR1-1,
CONSTITUTIVE 1		 0.61 0.33 -0.29
9 AT5G28210 mRNA capping enzyme family protein 0.61 0.33 -0.32
10 AT1G44780 CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ
(InterPro:IPR019098); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G08310.1); Has 18105
Blast hits to 11200 proteins in 808 species: Archae - 37;
Bacteria - 1195; Metazoa - 7724; Fungi - 1727; Plants -
674; Viruses - 183; Other Eukaryotes - 6565 (source: NCBI
BLink).		 0.6 0.32 -0.31
11 AT1G12930 ARM repeat superfamily protein 0.6 0.32 -0.31
12 AT2G43270 F-box and associated interaction domains-containing protein 0.6 0.32 -0.31
13 AT1G64690 branchless trichome BRANCHLESS TRICHOMES 0.58 0.31 -0.31
14 AT3G43330 transposable element gene 0.58 0.31 -0.31
15 AT3G56740 Ubiquitin-associated (UBA) protein 0.57 0.33 -0.32
16 AT3G43990 Bromo-adjacent homology (BAH) domain-containing protein 0.57 0.33 -0.32
17 AT1G09940 Glutamyl-tRNA reductase family protein HEMA2 -0.57 0.31 -0.3
18 AT1G24030 Protein kinase superfamily protein 0.56 0.32 -0.32
19 AT5G46670 Cysteine/Histidine-rich C1 domain family protein 0.55 0.29 -0.29
20 AT3G12470 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.55 0.29 -0.31
21 AT2G38900 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.55 0.3 -0.32
22 AT2G02515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: central cell, embryo;
EXPRESSED DURING: C globular stage; Has 18 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.55 0.33 -0.31
23 AT5G15140 Galactose mutarotase-like superfamily protein 0.54 0.32 -0.32
24 AT2G17770 basic region/leucine zipper motif 27 basic region/leucine zipper motif
27, basic region/leucine zipper
motif 27, FD PARALOG		 0.54 0.35 -0.33
25 AT3G24715 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.54 0.31 -0.32
26 AT5G66980 AP2/B3-like transcriptional factor family protein 0.54 0.3 -0.33
27 AT5G44140 prohibitin 7 prohibitin 7, prohibitin 7 0.54 0.32 -0.31
28 AT2G26120 glycine-rich protein -0.54 0.32 -0.29
29 AT3G59460 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT3G60040.1); Has 174 Blast hits to 172
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 174; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.53 0.33 -0.32
30 AT1G67000 Protein kinase superfamily protein -0.53 0.32 -0.31
31 AT5G25550 Leucine-rich repeat (LRR) family protein 0.53 0.33 -0.32
32 AT3G05820 invertase H alkaline/neutral invertase H,
Arabidopsis alkaline/neutral
invertase H, invertase H		 0.53 0.3 -0.33
33 AT3G57210 Protein of unknown function (DUF626) 0.53 0.29 -0.28
34 AT3G30396 transposable element gene 0.53 0.3 -0.31
35 AT3G22710 F-box family protein 0.53 0.31 -0.32
36 AT2G02750 Pentatricopeptide repeat (PPR) superfamily protein 0.53 0.32 -0.32
37 AT4G17160 RAB GTPase homolog B1A ATRAB2B, RAB GTPase homolog B1A,
RAB GTPase homolog B1A		 0.53 0.31 -0.28
38 AT5G14960 DP-E2F-like 2 DP-E2F-like 2, E2FD, E2L1 0.52 0.34 -0.31
39 AT2G19150 Pectin lyase-like superfamily protein 0.52 0.32 -0.32
40 AT2G10450 14-3-3 family protein -0.52 0.3 -0.34
41 AT5G47340 alpha/beta-Hydrolases superfamily protein 0.52 0.32 -0.3
42 AT2G14590 transposable element gene -0.52 0.34 -0.33
43 AT2G29880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G27260.1); Has 260 Blast hits
to 212 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 10; Plants - 240; Viruses - 0; Other
Eukaryotes - 9 (source: NCBI BLink).		 -0.52 0.3 -0.29
44 AT1G64800 DNA binding;sequence-specific DNA binding transcription
factors		 0.52 0.31 -0.32
45 AT5G01980 RING/U-box superfamily protein 0.52 0.3 -0.33
46 AT2G33850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in
133 species: Archae - 6; Bacteria - 52; Metazoa - 135;
Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes -
2689 (source: NCBI BLink).		 0.52 0.29 -0.29
47 AT3G02970 EXORDIUM like 6 EXORDIUM like 6 0.52 0.31 -0.31
48 AT3G62480 transposable element gene -0.52 0.32 -0.33
49 AT2G22250 aspartate aminotransferase aspartate aminotransferase,
ASPARTATE AMINOTRANSFERASE,
MATERNAL EFFECT EMBRYO ARREST 17		 -0.52 0.32 -0.3
50 AT1G01740 Protein kinase protein with tetratricopeptide repeat domain -0.52 0.3 -0.29
51 AT5G44630 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.52 0.31 -0.29
52 AT5G51310 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.52 0.31 -0.32
53 AT5G64700 nodulin MtN21 /EamA-like transporter family protein 0.52 0.32 -0.3
54 AT1G14800 Nucleic acid-binding, OB-fold-like protein 0.51 0.31 -0.31
55 AT1G43950 auxin response factor 23 auxin response factor 23 0.51 0.34 -0.32
56 AT1G29570 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.51 0.32 -0.32
57 AT2G11830 transposable element gene 0.51 0.3 -0.32
58 AT5G07390 respiratory burst oxidase homolog A respiratory burst oxidase homolog
A, respiratory burst oxidase
homolog A		 -0.5 0.32 -0.33
59 AT5G59260 Concanavalin A-like lectin protein kinase family protein 0.5 0.32 -0.31
60 AT3G42580 transposable element gene 0.5 0.33 -0.3
61 AT4G08380 Proline-rich extensin-like family protein 0.5 0.31 -0.31
62 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 0.5 0.32 -0.29
63 ATMG01240 hypothetical protein ORF100C 0.5 0.32 -0.3
64 AT1G13220 nuclear matrix constituent protein-related CROWDED NUCLEI 2, LITTLE NUCLEI2 0.5 0.32 -0.29
65 AT5G23780 DOMAIN OF UNKNOWN FUNCTION 724 9 DOMAIN OF UNKNOWN FUNCTION 724 9,
DOMAIN OF UNKNOWN FUNCTION 724 9		 0.49 0.3 -0.3
66 AT1G08270 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST
Arabidopsis thaliana protein match is: AAA-type ATPase
family protein (TAIR:AT2G27600.1); Has 1133 Blast hits to
1133 proteins in 252 species: Archae - 47; Bacteria - 0;
Metazoa - 540; Fungi - 145; Plants - 223; Viruses - 0;
Other Eukaryotes - 178 (source: NCBI BLink).		 -0.49 0.31 -0.3
67 AT2G30660 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.49 0.31 -0.33
68 AT3G09790 ubiquitin 8 ubiquitin 8 0.49 0.29 -0.3
69 AT2G28700 AGAMOUS-like 46 AGAMOUS-like 46 0.49 0.31 -0.3
70 AT2G02520 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.48 0.32 -0.31
71 AT4G28670 Protein kinase family protein with domain of unknown
function (DUF26)		 0.48 0.31 -0.33
72 AT5G65160 tetratricopeptide repeat (TPR)-containing protein tetratricopeptide repeat 14 -0.48 0.33 -0.31
73 AT1G52790 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.48 0.31 -0.33
74 AT2G38500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.48 0.32 -0.31
75 AT3G09470 Major facilitator superfamily protein -0.48 0.33 -0.32
76 AT4G25620 hydroxyproline-rich glycoprotein family protein -0.48 0.33 -0.32
77 AT1G28220 purine permease 3 purine permease 3, purine permease
3		 0.48 0.29 -0.31
78 AT1G66630 Protein with RING/U-box and TRAF-like domains -0.47 0.32 -0.31
79 AT5G47010 RNA helicase, putative ATUPF1, LOW-LEVEL BETA-AMYLASE 1,
UPF1		 0.47 0.32 -0.31
80 AT4G10200 TTF-type zinc finger protein with HAT dimerisation domain -0.47 0.33 -0.33
81 AT4G25430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G51850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.47 0.33 -0.33
82 AT3G14820 GDSL-like Lipase/Acylhydrolase superfamily protein -0.47 0.32 -0.32
83 AT3G48950 Pectin lyase-like superfamily protein 0.47 0.3 -0.3
84 AT4G31875 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.47 0.32 -0.32
85 AT4G09880 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.47 0.31 -0.31
86 AT3G45860 cysteine-rich RLK (RECEPTOR-like protein kinase) 4 cysteine-rich RLK (RECEPTOR-like
protein kinase) 4		 0.47 0.3 -0.32
87 AT3G47040 Glycosyl hydrolase family protein -0.46 0.31 -0.35
88 AT4G21730 pseudogene of N-ethylmaleimide sensitive factor (NSF) -0.46 0.3 -0.32
89 AT1G27640 Putative role in leaf development. Comparison of
SALK_123839C to Columbia under normal growth conditions
resulted in a trend toward increased leaf length in the
mutant (P=0.13; median 22 for mutant,17 for Columbia) (Ann
Stapleton and Delita Pardue, 2009, personal communication).		 -0.45 0.31 -0.31
90 AT4G01840 Ca2+ activated outward rectifying K+ channel 5 ATKCO5, ATTPK5, Ca2+ activated
outward rectifying K+ channel 5,
TPK5		 -0.45 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
91 C0196 Phosphatidylcholine-34:3 - Phosphatidylcholine-34:3 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		0.71 0.47 -0.45 C0196
92 C0181 MST_2904.3 - - - 0.66 0.45 -0.48
93 C0185 MST_3139.9 - - - -0.65 0.46 -0.43