AT3G54030 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G54030
Description Protein kinase protein with tetratricopeptide repeat domain
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G54030 Protein kinase protein with tetratricopeptide repeat domain 1 0.3 -0.31
2 AT1G53050 Protein kinase superfamily protein 0.83 0.31 -0.3
3 AT4G28600 no pollen germination related 2 no pollen germination related 2 0.81 0.33 -0.32
4 AT2G26520 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57500.1); Has 51 Blast hits
to 51 proteins in 11 species: Archae - 0; Bacteria - 1;
Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.81 0.34 -0.32
5 AT2G24100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits
to 101 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 ALTERED SEED GERMINATION 1 0.8 0.31 -0.31
6 AT5G19970 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.8 0.32 -0.31
7 AT5G24460 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.79 0.32 -0.32
8 AT5G16840 binding partner of acd11 1 binding partner of acd11 1 0.79 0.32 -0.33
9 AT1G43890 RAB GTPASE HOMOLOG B18 ARABIDOPSIS RAB GTPASE HOMOLOG C1,
ARABIDOPSIS RAB GTPASE HOMOLOG
B18, ARABIDOPSIS RAB GTPASE
HOMOLOG C1, RAB GTPASE HOMOLOG
B18, RAB GTPASE HOMOLOG 18-1, RAB
GTPASE HOMOLOG C1		 0.78 0.34 -0.33
10 AT1G73730 ETHYLENE-INSENSITIVE3-like 3 AtEIL3, ARABIDOPSIS THALIANA
SULFUR LIMITATION 1,
ETHYLENE-INSENSITIVE3-like 3,
SULFUR LIMITATION 1		 0.77 0.31 -0.33
11 AT5G14570 high affinity nitrate transporter 2.7 high affinity nitrate transporter
2.7, high affinity nitrate
transporter 2.7		 0.76 0.31 -0.3
12 AT2G07680 multidrug resistance-associated protein 11 ATP-binding cassette C13,
multidrug resistance-associated
protein 11, multidrug
resistance-associated protein 11		 -0.76 0.32 -0.32
13 AT1G21560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G01170.1); Has 76 Blast hits
to 76 proteins in 15 species: Archae - 0; Bacteria - 4;
Metazoa - 3; Fungi - 2; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.31 -0.33
14 AT5G58620 zinc finger (CCCH-type) family protein 0.76 0.32 -0.29
15 AT1G06420 unknown protein; Has 1017 Blast hits to 654 proteins in 124
species: Archae - 0; Bacteria - 39; Metazoa - 232; Fungi -
69; Plants - 40; Viruses - 0; Other Eukaryotes - 637
(source: NCBI BLink).		 -0.76 0.31 -0.33
16 AT4G11600 glutathione peroxidase 6 glutathione peroxidase 6,
glutathione peroxidase 6, LSC803,
PHGPX		 0.76 0.3 -0.3
17 AT2G40020 Nucleolar histone methyltransferase-related protein -0.76 0.32 -0.29
18 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4		 -0.75 0.32 -0.31
19 AT5G51830 pfkB-like carbohydrate kinase family protein 0.75 0.33 -0.32
20 AT3G03950 evolutionarily conserved C-terminal region 1 evolutionarily conserved
C-terminal region 1		 0.75 0.32 -0.33
21 AT1G31280 Argonaute family protein argonaute 2 0.74 0.33 -0.32
22 AT1G80850 DNA glycosylase superfamily protein -0.74 0.31 -0.33
23 AT3G53990 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.74 0.33 -0.31
24 AT3G28080 nodulin MtN21 /EamA-like transporter family protein -0.74 0.32 -0.31
25 AT1G28120 CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain
(InterPro:IPR003323), Ubiquitin thioesterase Otubain
(InterPro:IPR016615), Peptidase C65, otubain
(InterPro:IPR019400); Has 413 Blast hits to 411 proteins in
139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi
- 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 0.73 0.3 -0.31
26 AT1G51400 Photosystem II 5 kD protein -0.73 0.33 -0.31
27 AT5G21100 Plant L-ascorbate oxidase -0.73 0.32 -0.3
28 AT2G01630 O-Glycosyl hydrolases family 17 protein -0.73 0.33 -0.32
29 AT4G23040 Ubiquitin-like superfamily protein 0.73 0.34 -0.31
30 AT5G02580 Plant protein 1589 of unknown function 0.73 0.32 -0.34
31 AT4G26750 hydroxyproline-rich glycoprotein family protein extensin-like 0.73 0.32 -0.32
32 AT2G34620 Mitochondrial transcription termination factor family
protein		 -0.73 0.3 -0.32
33 AT3G13330 proteasome activating protein 200 proteasome activating protein 200 0.73 0.32 -0.33
34 AT2G24150 heptahelical protein 3 heptahelical protein 3 -0.72 0.31 -0.31
35 AT1G13080 cytochrome P450, family 71, subfamily B, polypeptide 2 cytochrome P450, family 71,
subfamily B, polypeptide 2		 -0.72 0.33 -0.3
36 AT4G23460 Adaptin family protein 0.72 0.32 -0.31
37 AT5G60540 pyridoxine biosynthesis 2 PYRIDOXINE BIOSYNTHESIS 2, EMBRYO
DEFECTIVE 2407, pyridoxine
biosynthesis 2		 0.72 0.31 -0.32
38 AT4G24550 Clathrin adaptor complexes medium subunit family protein 0.72 0.32 -0.32
39 AT5G04950 nicotianamine synthase 1 ARABIDOPSIS THALIANA NICOTIANAMINE
SYNTHASE 1, nicotianamine synthase
1		 -0.72 0.31 -0.33
40 AT1G47710 Serine protease inhibitor (SERPIN) family protein 0.72 0.31 -0.32
41 AT4G01320 Peptidase family M48 family protein ATSTE24, STE24 0.72 0.3 -0.32
42 AT3G09350 Fes1A Fes1A 0.72 0.32 -0.31
43 AT5G62460 RING/FYVE/PHD zinc finger superfamily protein 0.72 0.31 -0.32
44 AT2G47970 Nuclear pore localisation protein NPL4 0.72 0.3 -0.31
45 AT2G30530 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G01970.1); Has 5513 Blast hits to
872 proteins in 154 species: Archae - 0; Bacteria - 30;
Metazoa - 615; Fungi - 144; Plants - 149; Viruses - 12;
Other Eukaryotes - 4563 (source: NCBI BLink).		 0.72 0.34 -0.35
46 AT5G51430 conserved oligomeric Golgi complex component-related / COG
complex component-related		 EMBRYO YELLOW 0.71 0.31 -0.31
47 AT5G40610 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 -0.71 0.31 -0.3
48 AT4G23400 plasma membrane intrinsic protein 1;5 plasma membrane intrinsic protein
1;5, PIP1D		 -0.71 0.31 -0.33
49 AT5G15830 basic leucine-zipper 3 basic leucine-zipper 3, basic
leucine-zipper 3		 -0.71 0.31 -0.33
50 AT1G66340 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 AtETR1, ETHYLENE INSENSITIVE 1,
ETHYLENE RESPONSE, ETHYLENE
RESPONSE 1		 0.71 0.33 -0.31
51 AT5G19000 BTB-POZ and MATH domain 1 BTB-POZ AND MATH DOMAIN 1, BTB-POZ
and MATH domain 1		 0.71 0.33 -0.32
52 AT3G52720 alpha carbonic anhydrase 1 alpha carbonic anhydrase 1, A.
THALIANA ALPHA CARBONIC ANHYDRASE
1, CARBONIC ANHYDRASE 1		 -0.71 0.31 -0.33
53 AT4G14580 CBL-interacting protein kinase 4 CBL-interacting protein kinase 4,
SNF1-RELATED PROTEIN KINASE 3.3		 0.71 0.33 -0.3
54 AT1G33230 TMPIT-like protein 0.71 0.33 -0.32
55 AT2G45800 GATA type zinc finger transcription factor family protein PLIM2a -0.71 0.3 -0.3
56 AT1G69580 Homeodomain-like superfamily protein -0.71 0.32 -0.32
57 AT5G54430 Adenine nucleotide alpha hydrolases-like superfamily
protein		 ATPHOS32, PHOS32 0.71 0.31 -0.3
58 AT4G33070 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 0.7 0.31 -0.33
59 AT2G31190 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 2, weak auxin
response1		 -0.7 0.31 -0.31
60 AT5G63370 Protein kinase superfamily protein 0.7 0.29 -0.3
61 AT5G03340 ATPase, AAA-type, CDC48 protein 0.7 0.33 -0.31
62 AT4G27500 proton pump interactor 1 proton pump interactor 1 0.7 0.28 -0.3
63 AT5G35320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.7 0.3 -0.31
64 AT1G01500 Erythronate-4-phosphate dehydrogenase family protein 0.7 0.31 -0.31
65 AT4G33000 calcineurin B-like protein 10 ATCBL10, calcineurin B-like
protein 10, SOS3-LIKE CALCIUM
BINDING PROTEIN 8		 -0.7 0.31 -0.35
66 AT4G17340 tonoplast intrinsic protein 2;2 DELTA-TIP2, tonoplast intrinsic
protein 2;2		 -0.7 0.3 -0.31
67 AT5G58770 Undecaprenyl pyrophosphate synthetase family protein -0.69 0.31 -0.31
68 AT5G27650 Tudor/PWWP/MBT superfamily protein 0.69 0.31 -0.31
69 AT3G43510 transposable element gene 0.69 0.31 -0.32
70 AT3G47430 peroxin 11B peroxin 11B -0.69 0.31 -0.29
71 AT4G08170 Inositol 1,3,4-trisphosphate 5/6-kinase family protein 0.69 0.31 -0.33
72 AT4G22570 adenine phosphoribosyl transferase 3 adenine phosphoribosyl transferase
3		 -0.69 0.31 -0.32
73 AT3G10300 Calcium-binding EF-hand family protein 0.69 0.31 -0.32
74 AT5G44410 FAD-binding Berberine family protein -0.69 0.32 -0.31
75 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA 0.69 0.31 -0.31
76 AT5G01015 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65295.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.69 0.33 -0.33
77 AT5G47060 Protein of unknown function (DUF581) 0.69 0.33 -0.32
78 AT4G25940 ENTH/ANTH/VHS superfamily protein -0.69 0.29 -0.32
79 AT5G24470 pseudo-response regulator 5 pseudo-response regulator 5,
pseudo-response regulator 5		 0.69 0.31 -0.31
80 AT3G28960 Transmembrane amino acid transporter family protein -0.68 0.29 -0.32
81 AT5G47900 Protein of unknown function (DUF1624) -0.68 0.33 -0.33
82 AT3G01690 alpha/beta-Hydrolases superfamily protein -0.68 0.32 -0.31
83 AT3G28130 nodulin MtN21 /EamA-like transporter family protein -0.68 0.31 -0.31
84 AT2G15320 Leucine-rich repeat (LRR) family protein 0.68 0.31 -0.32
85 AT1G80870 Protein kinase superfamily protein -0.68 0.31 -0.31
86 AT5G63120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.31 -0.31
87 AT3G12560 TRF-like 9 TELOMERIC DNA-BINDING PROTEIN 2,
TRF-like 9		 -0.68 0.32 -0.33
88 AT2G27420 Cysteine proteinases superfamily protein -0.68 0.31 -0.33
89 AT4G34120 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 2,
CYSTATHIONE [BETA]-SYNTHASE
DOMAIN-CONTAINING PROTEIN 1, LOSS
OF THE TIMING OF ET AND JA
BIOSYNTHESIS 1		 0.68 0.31 -0.32
90 AT5G24500 unknown protein; Has 133 Blast hits to 129 proteins in 40
species: Archae - 2; Bacteria - 0; Metazoa - 60; Fungi - 5;
Plants - 29; Viruses - 0; Other Eukaryotes - 37 (source:
NCBI BLink).		 0.68 0.31 -0.3
91 AT2G19450 membrane bound O-acyl transferase (MBOAT) family protein ABX45, AS11, Arabidopsis thaliana
acyl-CoA:diacylglycerol
acyltransferase,
acyl-CoA:diacylglycerol
acyltransferase 1, RDS1,
TRIACYLGLYCEROL BIOSYNTHESIS
DEFECT 1		 0.67 0.35 -0.32
92 AT5G10950 Tudor/PWWP/MBT superfamily protein 0.67 0.32 -0.34
93 AT3G11210 SGNH hydrolase-type esterase superfamily protein 0.67 0.33 -0.32
94 AT5G54660 HSP20-like chaperones superfamily protein -0.67 0.31 -0.3
95 AT5G61420 myb domain protein 28 AtMYB28, HIGH ALIPHATIC
GLUCOSINOLATE 1, myb domain
protein 28, PRODUCTION OF
METHIONINE-DERIVED GLUCOSINOLATE 1		 -0.67 0.33 -0.32
96 AT1G62250 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 15 growth stages; Has
30 Blast hits to 30 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.32 -0.31
97 AT3G09410 Pectinacetylesterase family protein -0.67 0.31 -0.3
98 AT5G66200 armadillo repeat only 2 armadillo repeat only 2 0.67 0.32 -0.32
99 AT5G26770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05830.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.67 0.31 -0.3
100 AT5G53020 Ribonuclease P protein subunit P38-related -0.67 0.32 -0.31
101 AT4G22790 MATE efflux family protein -0.67 0.32 -0.31
102 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 0.67 0.32 -0.32
103 AT3G17470 Ca2+-activated RelA/spot homolog ATCRSH, Ca2+-activated RelA/spot
homolog		 -0.67 0.32 -0.32
104 AT4G27940 manganese tracking factor for mitochondrial SOD2 ARABIDOPSIS MANGANESE TRACKING
FACTOR FOR MITOCHONDRIAL SOD2,
manganese tracking factor for
mitochondrial SOD2		 0.67 0.31 -0.31
105 AT3G18710 plant U-box 29 ARABIDOPSIS THALIANA PLANT U-BOX
29, plant U-box 29		 -0.66 0.3 -0.33
106 AT1G37130 nitrate reductase 2 ARABIDOPSIS NITRATE REDUCTASE 2,
B29, CHLORATE RESISTANT 3, nitrate
reductase 2, NIA2-1, NITRATE
REDUCTASE, NITRATE REDUCTASE 2		 -0.66 0.3 -0.32
107 AT1G12730 GPI transamidase subunit PIG-U -0.66 0.33 -0.32
108 AT5G66490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G50900.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.3 -0.33
109 AT2G40030 nuclear RNA polymerase D1B ATNRPD1B, DEFECTIVE IN MERISTEM
SILENCING 5, DRD3, nuclear RNA
polymerase D1B, NRPE1		 -0.66 0.33 -0.31
110 AT5G01700 Protein phosphatase 2C family protein -0.66 0.3 -0.31
111 AT5G40470 RNI-like superfamily protein -0.65 0.29 -0.29
112 AT2G30280 RNA-directed DNA methylation 4 DEFECTIVE IN MERISTEM SILENCING 4,
RNA-directed DNA methylation 4		 -0.65 0.32 -0.31
113 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein -0.65 0.34 -0.29
114 AT1G78020 Protein of unknown function (DUF581) -0.65 0.3 -0.32
115 AT2G37420 ATP binding microtubule motor family protein -0.65 0.31 -0.32
116 AT5G49390 LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G06670.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.65 0.29 -0.31
117 AT1G80790 XH/XS domain-containing protein factor of DNA methylation 5 -0.65 0.31 -0.31
118 AT3G60380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in
424 species: Archae - 6; Bacteria - 372; Metazoa - 2603;
Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes -
2147 (source: NCBI BLink).		 -0.65 0.31 -0.33