AT3G54060 : -
Query Information
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AGICode AT3G54060
Description unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits to 322 proteins in 98 species: Archae - 0; Bacteria - 178; Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other Eukaryotes - 84 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 1 0.3 -0.3
2 AT1G61500 S-locus lectin protein kinase family protein 0.72 0.33 -0.32
3 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.7 0.34 -0.32
4 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 -0.69 0.33 -0.33
5 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein 0.66 0.33 -0.31
6 AT2G17975 zinc finger (Ran-binding) family protein 0.66 0.34 -0.33
7 AT4G33180 alpha/beta-Hydrolases superfamily protein 0.65 0.32 -0.32
8 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.63 0.31 -0.3
9 AT1G62920 CONTAINS InterPro DOMAIN/s: Proteasome maturation factor
UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana
protein match is: Proteasome maturation factor UMP1
(TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.32 -0.32
10 AT4G03205 Coproporphyrinogen III oxidase hemf2 0.62 0.33 -0.33
11 AT5G40490 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.31 -0.34
12 AT1G79820 Major facilitator superfamily protein SUPPRESSOR OF G PROTEIN BETA1 0.62 0.3 -0.31
13 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.62 0.32 -0.32
14 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 -0.62 0.32 -0.31
15 AT2G42930 Carbohydrate-binding X8 domain superfamily protein -0.61 0.31 -0.31
16 AT3G14090 exocyst subunit exo70 family protein D3 exocyst subunit exo70 family
protein D3, exocyst subunit exo70
family protein D3		 -0.61 0.32 -0.3
17 AT3G46200 nudix hydrolase homolog 9 nudix hydrolase homolog 9, nudix
hydrolase homolog 9		 0.61 0.33 -0.33
18 AT1G68200 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.61 0.32 -0.31
19 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.61 0.3 -0.29
20 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.6 0.33 -0.3
21 AT1G65880 benzoyloxyglucosinolate 1 benzoyloxyglucosinolate 1 0.6 0.3 -0.32
22 AT5G22720 F-box/RNI-like superfamily protein 0.59 0.34 -0.33
23 AT4G00040 Chalcone and stilbene synthase family protein 0.58 0.32 -0.32
24 AT1G22860 Vacuolar sorting protein 39 0.58 0.32 -0.31
25 AT5G36150 putative pentacyclic triterpene synthase 3 putative pentacyclic triterpene
synthase 3, putative pentacyclic
triterpene synthase 3		 -0.58 0.29 -0.31
26 AT2G06310 transposable element gene 0.58 0.32 -0.3
27 AT4G02660 Beige/BEACH domain ;WD domain, G-beta repeat protein 0.58 0.28 -0.31
28 AT1G48870 Transducin/WD40 repeat-like superfamily protein 0.58 0.32 -0.3
29 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 0.58 0.3 -0.33
30 AT5G37140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.3 -0.32
31 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.57 0.31 -0.32
32 AT5G59940 Cysteine/Histidine-rich C1 domain family protein -0.57 0.31 -0.3
33 ATMG00470 hypothetical protein ORF122A 0.57 0.34 -0.31
34 AT1G70040 Protein of unknown function (DUF1163) -0.57 0.31 -0.29
35 AT3G52610 unknown protein; Has 68 Blast hits to 67 proteins in 21
species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.57 0.31 -0.33
36 AT2G21490 dehydrin LEA dehydrin LEA 0.57 0.33 -0.3
37 AT1G17950 myb domain protein 52 MYB DOMAIN PROTEIN 52, BW52, myb
domain protein 52		 0.57 0.32 -0.3
38 AT1G03180 unknown protein; Has 36 Blast hits to 36 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.56 0.3 -0.31
39 AT3G28030 5'-3' exonuclease family protein ULTRAVIOLET HYPERSENSITIVE 3, UV
REPAIR DEFECTIVE 1		 0.56 0.32 -0.28
40 AT5G08335 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ARABIDOPSIS THALIANA ISOPRENYL
CYSTEINE METHYLTRANSFERASE B,
ATSTE14B, ISOPRENYL CYSTEINE
METHYLTRANSFERASE B		 -0.56 0.33 -0.32
41 AT1G44740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: embryo, leaf whorl, flower,
seed; EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 8 Blast hits to 7 proteins in
3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
1; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.56 0.34 -0.31
42 AT2G48150 glutathione peroxidase 4 glutathione peroxidase 4,
glutathione peroxidase 4		 -0.56 0.32 -0.3
43 AT3G14300 pectinesterase family protein A. THALIANA PECTIN METHYLESTERASE
26, ATPMEPCRC, PECTIN
METHYLESTERASE 26		 0.56 0.34 -0.29
44 AT1G65670 cytochrome P450, family 702, subfamily A, polypeptide 1 cytochrome P450, family 702,
subfamily A, polypeptide 1		 0.55 0.3 -0.34
45 AT5G45560 Pleckstrin homology (PH) domain-containing protein /
lipid-binding START domain-containing protein		 0.55 0.33 -0.33
46 AT3G29070 emp24/gp25L/p24 family/GOLD family protein -0.55 0.32 -0.31
47 AT3G19610 Plant protein of unknown function (DUF936) -0.55 0.3 -0.34
48 AT3G21600 Senescence/dehydration-associated protein-related -0.54 0.34 -0.32
49 AT3G52620 unknown protein; Has 11 Blast hits to 11 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.54 0.34 -0.31
50 AT3G44030 pseudogene, similar to OSJNBb0043H09.1, blastp match of 40%
identity and 8.4e-38 P-value to
GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza
sativa (japonica cultivar-group)}		 0.54 0.32 -0.31
51 AT2G11270 citrate synthase-related 0.54 0.3 -0.32
52 AT3G47940 DNAJ heat shock family protein -0.54 0.32 -0.3
53 AT4G02810 Protein of unknown function (DUF3049) FANTASTIC FOUR 1 -0.54 0.31 -0.31
54 AT2G24190 NAD(P)-binding Rossmann-fold superfamily protein short-chain
dehydrogenase/reductase 2		 0.54 0.3 -0.32
55 AT4G23580 Galactose oxidase/kelch repeat superfamily protein -0.54 0.34 -0.31
56 AT2G38900 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.54 0.32 -0.3
57 AT1G16130 wall associated kinase-like 2 wall associated kinase-like 2 -0.54 0.31 -0.3
58 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.33 -0.33
59 AT3G55020 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.54 0.32 -0.31
60 AT1G65950 Protein kinase superfamily protein 0.54 0.31 -0.32
61 AT1G01450 Protein kinase superfamily protein 0.54 0.31 -0.31
62 AT2G13840 Polymerase/histidinol phosphatase-like -0.53 0.3 -0.33
63 AT3G27980 Plant invertase/pectin methylesterase inhibitor superfamily -0.53 0.3 -0.33
64 AT1G50970 Membrane trafficking VPS53 family protein 0.53 0.31 -0.31
65 AT2G42270 U5 small nuclear ribonucleoprotein helicase 0.53 0.31 -0.3
66 AT2G30630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.53 0.32 -0.3
67 AT1G34240 transposable element gene 0.53 0.31 -0.31
68 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein 0.52 0.33 -0.29
69 AT3G22650 F-box and associated interaction domains-containing protein S-LOCUS F-BOX 61, CEGENDUO,
S-LOCUS F-BOX 61		 0.52 0.31 -0.32
70 AT3G44560 fatty acid reductase 8 fatty acid reductase 8 0.52 0.33 -0.28
71 AT2G44240 Protein of Unknown Function (DUF239) -0.52 0.32 -0.32
72 AT1G69080 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.52 0.3 -0.33
73 AT1G47220 Cyclin A3;3 Cyclin A3;3 0.52 0.31 -0.31
74 AT2G44800 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.51 0.31 -0.33
75 AT1G09170 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.51 0.3 -0.31
76 AT3G17230 invertase/pectin methylesterase inhibitor family protein 0.51 0.32 -0.33
77 AT2G17370 3-hydroxy-3-methylglutaryl-CoA reductase 2 3-hydroxy-3-methylglutaryl-CoA
reductase 2,
3-HYDROXY-3-METHYLGLUTARYL-COENZYM
E A REDUCTASE 2		 -0.51 0.35 -0.3
78 AT2G45780 other RNA 0.51 0.33 -0.31
79 AT2G22440 BEST Arabidopsis thaliana protein match is: Ribonuclease
H-like superfamily protein (TAIR:AT4G29090.1); Has 208
Blast hits to 191 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.51 0.32 -0.32
80 AT3G03290 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.51 0.31 -0.33
81 AT2G19060 SGNH hydrolase-type esterase superfamily protein -0.51 0.32 -0.31
82 AT2G27090 Protein of unknown function (DUF630 and DUF632) -0.5 0.33 -0.28
83 AT1G31070 N-acetylglucosamine-1-phosphate uridylyltransferase 1 N-acetylglucosamine-1-phosphate
uridylyltransferase 1		 -0.5 0.28 -0.29
84 AT2G23510 spermidine disinapoyl acyltransferase spermidine disinapoyl
acyltransferase		 0.5 0.33 -0.31
85 AT3G50580 LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl,
sepal, flower; EXPRESSED DURING: petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: ECA1 gametogenesis related family protein
(TAIR:AT1G44191.1); Has 132049 Blast hits to 55074 proteins
in 2314 species: Archae - 393; Bacteria - 25609; Metazoa -
44661; Fungi - 17591; Plants - 17316; Viruses - 4153; Other
Eukaryotes - 22326 (source: NCBI BLink).		 0.5 0.34 -0.31
86 AT1G69780 Homeobox-leucine zipper protein family ATHB13 -0.5 0.31 -0.31
87 AT4G17990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17700.1); Has 134 Blast hits
to 131 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.49 0.32 -0.33
88 AT2G16910 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ABORTED MICROSPORES 0.49 0.31 -0.3
89 AT5G23790 galactinol synthase 5 galactinol synthase 5, galactinol
synthase 5		 -0.49 0.31 -0.31
90 AT3G28510 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.49 0.31 -0.35
91 AT1G33880 Avirulence induced gene (AIG1) family protein 0.49 0.33 -0.33
92 AT1G06770 DREB2A-interacting protein 1 DREB2A-interacting protein 1 -0.49 0.33 -0.32
93 AT1G33340 ENTH/ANTH/VHS superfamily protein -0.49 0.32 -0.3
94 AT2G20660 ralf-like 14 ralf-like 14 -0.48 0.31 -0.31
95 AT5G53240 Protein of unknown function (DUF295) -0.48 0.31 -0.33
96 AT1G47520 transposable element gene -0.48 0.31 -0.32
97 AT4G05510 transposable element gene -0.47 0.33 -0.31
98 AT1G03050 ENTH/ANTH/VHS superfamily protein -0.47 0.33 -0.31
99 AT5G25070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.47 0.32 -0.32
100 AT5G13970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G13310.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.47 0.31 -0.33
101 AT4G26220 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.47 0.31 -0.3
102 AT1G61860 Protein kinase superfamily protein -0.46 0.3 -0.31
103 AT4G09610 GAST1 protein homolog 2 GAST1 protein homolog 2 -0.46 0.29 -0.32