AT3G53700 : maternal effect embryo arrest 40
Query Information
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AGICode AT3G53700
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G53700 Pentatricopeptide repeat (PPR) superfamily protein maternal effect embryo arrest 40 1 0.31 -0.31
2 AT2G47840 Uncharacterised conserved protein ycf60 translocon at the inner envelope
membrane of chloroplasts 20-II,
translocon at the inner envelope
membrane of chloroplasts 20-II		 0.83 0.3 -0.33
3 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.81 0.32 -0.29
4 AT1G80640 Protein kinase superfamily protein 0.8 0.33 -0.33
5 AT5G24570 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.8 0.31 -0.32
6 AT2G43710 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 FATTY ACID BIOSYNTHESIS 2,
suppressor of SA insensitive 2		 0.79 0.28 -0.33
7 AT4G24510 HXXXD-type acyl-transferase family protein ECERIFERUM 2, VC-2, VC2 0.79 0.31 -0.3
8 AT1G62640 3-ketoacyl-acyl carrier protein synthase III 3-ketoacyl-acyl carrier protein
synthase III		 0.78 0.3 -0.32
9 AT5G17790 zinc finger (Ran-binding) family protein VARIEGATED 3 0.78 0.31 -0.31
10 AT4G28590 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10
growth stages; BEST Arabidopsis thaliana protein match is:
Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114
Blast hits to 112 proteins in 39 species: Archae - 2;
Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses
- 0; Other Eukaryotes - 22 (source: NCBI BLink).		 Mesophyll-cell RNAi Library line 7 0.77 0.3 -0.33
11 AT3G02250 O-fucosyltransferase family protein 0.76 0.31 -0.31
12 AT1G70070 DEAD/DEAH box helicase, putative EMBRYO DEFECTIVE 25, INCREASED
SIZE EXCLUSION LIMIT 2, PIGMENT
DEFECTIVE 317		 0.75 0.31 -0.32
13 AT3G55360 3-oxo-5-alpha-steroid 4-dehydrogenase family protein ATTSC13, ECERIFERUM 10, ENOYL-COA
REDUCTASE, TSC13		 0.75 0.33 -0.3
14 AT5G60780 nitrate transporter 2.3 ARABIDOPSIS THALIANA NITRATE
TRANSPORTER 2.3, nitrate
transporter 2.3		 0.75 0.31 -0.31
15 AT1G24440 RING/U-box superfamily protein -0.75 0.3 -0.33
16 AT5G23070 Thymidine kinase 0.75 0.32 -0.3
17 AT3G57130 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE 1 0.74 0.31 -0.32
18 AT3G04550 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in
51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.74 0.31 -0.34
19 AT5G17870 plastid-specific 50S ribosomal protein 6 plastid-specific 50S ribosomal
protein 6		 0.74 0.33 -0.31
20 AT3G56580 RING/U-box superfamily protein 0.73 0.29 -0.31
21 AT5G24300 Glycogen/starch synthases, ADP-glucose type STARCH SYNTHASE 1, starch synthase
1		 0.73 0.33 -0.3
22 AT5G03760 Nucleotide-diphospho-sugar transferases superfamily protein ATCSLA09, ATCSLA9, CSLA09,
CELLULOSE SYNTHASE LIKE A9,
RESISTANT TO AGROBACTERIUM
TRANSFORMATION 4		 0.73 0.32 -0.33
23 AT5G40830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.32 -0.31
24 AT3G54400 Eukaryotic aspartyl protease family protein 0.72 0.31 -0.31
25 AT5G09320 Vacuolar sorting protein 9 (VPS9) domain VPS9B 0.72 0.33 -0.3
26 AT2G33570 Domain of unknown function (DUF23) 0.72 0.32 -0.32
27 AT5G64640 Plant invertase/pectin methylesterase inhibitor superfamily 0.72 0.3 -0.31
28 AT2G40110 Yippee family putative zinc-binding protein -0.71 0.31 -0.32
29 AT1G26440 ureide permease 5 ureide permease 5, UPS5, ureide
permease 5		 -0.71 0.31 -0.35
30 AT2G45190 Plant-specific transcription factor YABBY family protein ABNORMAL FLORAL ORGANS,
FILAMENTOUS FLOWER, YABBY1		 0.71 0.31 -0.31
31 AT3G23820 UDP-D-glucuronate 4-epimerase 6 UDP-D-glucuronate 4-epimerase 6 0.71 0.32 -0.31
32 AT1G78000 sulfate transporter 1;2 SELENATE RESISTANT 1, sulfate
transporter 1;2		 -0.7 0.33 -0.32
33 AT1G29760 Putative adipose-regulatory protein (Seipin) -0.69 0.32 -0.34
34 AT4G11360 RING-H2 finger A1B RING-H2 finger A1B -0.68 0.3 -0.33
35 AT5G24870 RING/U-box superfamily protein -0.67 0.32 -0.32
36 AT1G15110 phosphatidyl serine synthase family protein phosphatidylserine synthase 1 -0.66 0.31 -0.31
37 AT1G05710 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.65 0.33 -0.33
38 AT3G29035 NAC domain containing protein 3 Arabidopsis NAC domain containing
protein 59, NAC domain containing
protein 3, NAC domain containing
protein 3, ORE1 SISTER1		 -0.65 0.32 -0.3
39 AT1G32700 PLATZ transcription factor family protein -0.64 0.32 -0.3
40 AT1G76560 CP12 domain-containing protein 3 CP12 domain-containing protein 3 -0.63 0.3 -0.32
41 AT3G59660 C2 domain-containing protein / GRAM domain-containing
protein		 -0.62 0.31 -0.31
42 AT3G21260 Glycolipid transfer protein (GLTP) family protein GLYCOLIPID TRANSFER PROTEIN 3 -0.62 0.34 -0.32
43 AT1G69790 Protein kinase superfamily protein -0.61 0.31 -0.31
44 AT5G55970 RING/U-box superfamily protein -0.61 0.35 -0.31
45 AT5G54400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.6 0.31 -0.31
46 AT5G58510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G55060.2); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.32 -0.31
47 AT3G23230 Integrase-type DNA-binding superfamily protein -0.59 0.32 -0.35
48 AT1G78110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 7 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G22230.1); Has 5452
Blast hits to 3541 proteins in 289 species: Archae - 4;
Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205;
Viruses - 141; Other Eukaryotes - 2649 (source: NCBI
BLink).		 -0.58 0.32 -0.3
49 AT5G51390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.31 -0.31
50 AT2G45500 AAA-type ATPase family protein -0.58 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
51 C0183 MST_3033.1 - - - 0.84 0.48 -0.47
52 C0135 Kaempferol-hexosyl-dirhamnoside - - - -0.72 0.47 -0.44