AT3G53580 : -
Query Information
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AGICode AT3G53580
Description diaminopimelate epimerase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G53580 diaminopimelate epimerase family protein 1 0.33 -0.31
2 AT5G24650 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.82 0.31 -0.32
3 AT5G23140 nuclear-encoded CLP protease P7 CLPP2, nuclear-encoded CLP
protease P7		 0.81 0.37 -0.34
4 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.8 0.3 -0.34
5 AT3G07430 YGGT family protein ATYLMG1-1, embryo defective 1990,
YLMG1-1		 0.8 0.34 -0.29
6 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.8 0.3 -0.35
7 AT4G00810 60S acidic ribosomal protein family 0.8 0.31 -0.33
8 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.79 0.31 -0.34
9 AT2G20140 AAA-type ATPase family protein regulatory particle AAA-ATPase 2b 0.79 0.3 -0.33
10 AT1G13320 protein phosphatase 2A subunit A3 protein phosphatase 2A subunit A3 0.79 0.31 -0.31
11 AT4G09730 RH39 RH39 0.79 0.31 -0.32
12 AT2G18050 histone H1-3 histone H1-3 -0.79 0.33 -0.3
13 AT3G57610 adenylosuccinate synthase adenylosuccinate synthase 0.78 0.31 -0.31
14 AT2G47580 spliceosomal protein U1A spliceosomal protein U1A 0.78 0.3 -0.32
15 AT5G05780 RP non-ATPase subunit 8A ASYMMETRIC LEAVES ENHANCER 3,
ATHMOV34, RP non-ATPase subunit 8A		 0.78 0.32 -0.33
16 AT3G05000 Transport protein particle (TRAPP) component 0.78 0.33 -0.3
17 AT1G05810 RAB GTPase homolog A5E ARA, ARA-1, ATRAB11D, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A5E,
RAB GTPase homolog A5E		 0.78 0.32 -0.31
18 AT1G14810 semialdehyde dehydrogenase family protein 0.77 0.32 -0.32
19 AT3G07630 arogenate dehydratase 2 arogenate dehydratase 2,
Arabidopsis thaliana arogenate
dehydratase 2		 0.77 0.32 -0.3
20 AT1G15140 FAD/NAD(P)-binding oxidoreductase 0.77 0.3 -0.29
21 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.77 0.31 -0.31
22 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 -0.77 0.33 -0.3
23 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.77 0.32 -0.31
24 AT2G04360 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.76 0.33 -0.33
25 AT1G05055 general transcription factor II H2 ATGTF2H2, general transcription
factor II H2		 0.76 0.32 -0.31
26 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.76 0.34 -0.3
27 AT4G17300 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 ATNS1, NS1, ovule abortion 8 0.76 0.31 -0.31
28 AT1G79520 Cation efflux family protein -0.75 0.31 -0.3
29 AT5G05010 clathrin adaptor complexes medium subunit family protein 0.75 0.31 -0.3
30 AT4G26300 Arginyl-tRNA synthetase, class Ic embryo defective 1027 0.75 0.32 -0.31
31 AT4G26900 HIS HF HIS HF, HISN4 0.75 0.3 -0.32
32 AT5G46290 3-ketoacyl-acyl carrier protein synthase I KETOACYL-ACP SYNTHASE 1,
3-ketoacyl-acyl carrier protein
synthase I		 0.75 0.32 -0.31
33 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.75 0.32 -0.31
34 AT5G41950 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.33 -0.33
35 AT4G09720 RAB GTPase homolog G3A RAB GTPase homolog G3A, RAB GTPase
homolog G3A		 0.74 0.31 -0.3
36 AT2G27030 calmodulin 5 ACAM-2, calmodulin 5 0.74 0.3 -0.32
37 AT3G57540 Remorin family protein -0.73 0.31 -0.3
38 AT5G57460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to
166 proteins in 41 species: Archae - 0; Bacteria - 0;
Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.73 0.32 -0.32
39 AT3G63210 Protein of unknown function (DUF581) MEDIATOR OF ABA-REGULATED DORMANCY
1		 -0.73 0.34 -0.34
40 AT5G63890 histidinol dehydrogenase histidinol dehydrogenase,
histidinol dehydrogenase,
HISTIDINE BIOSYNTHESIS 8		 0.73 0.31 -0.3
41 AT3G17390 S-adenosylmethionine synthetase family protein METHIONINE ADENOSYLTRANSFERASE 4,
METHIONINE OVER-ACCUMULATOR 3,
S-ADENOSYLMETHIONINE SYNTHETASE 3		 0.73 0.3 -0.34
42 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.73 0.34 -0.32
43 AT4G27080 PDI-like 5-4 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 7, PDI-like
5-4, PROTEIN DISULFIDE ISOMERASE
7, PDI-like 5-4		 0.73 0.33 -0.33
44 AT1G26160 Metal-dependent phosphohydrolase 0.72 0.3 -0.33
45 AT2G21195 unknown protein; Has 28 Blast hits to 28 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.32 -0.3
46 AT1G80310 sulfate transmembrane transporters molybdate transporter 2 -0.72 0.33 -0.29
47 AT1G60780 Clathrin adaptor complexes medium subunit family protein HAPLESS 13 0.72 0.29 -0.29
48 AT2G06000 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.31 -0.3
49 AT3G61130 galacturonosyltransferase 1 galacturonosyltransferase 1, LGT1 0.72 0.31 -0.31
50 AT1G11650 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45B, RBP45B 0.72 0.33 -0.29
51 AT4G05100 myb domain protein 74 myb domain protein 74, myb domain
protein 74		 -0.72 0.33 -0.31
52 AT2G46470 inner membrane protein OXA1-like inner membrane protein OXA1-like 0.71 0.32 -0.35
53 AT1G02140 mago nashi family protein HAPLESS 1, MAGO NASHI, MATERNAL
EFFECT EMBRYO ARREST 63		 0.71 0.3 -0.32
54 AT4G33550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.7 0.32 -0.31
55 AT3G24570 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.7 0.31 -0.35
56 AT1G45170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits
to 62 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.33 -0.29
57 AT1G12310 Calcium-binding EF-hand family protein 0.7 0.3 -0.32
58 AT2G01580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits
to 129 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.3 -0.33
59 AT2G03870 Small nuclear ribonucleoprotein family protein EMBRYO DEFECTIVE 2816 0.7 0.31 -0.3
60 AT5G59320 lipid transfer protein 3 lipid transfer protein 3 -0.7 0.29 -0.31
61 AT1G55740 seed imbibition 1 seed imbibition 1, raffinose
synthase 1, seed imbibition 1		 -0.7 0.31 -0.32
62 AT2G22660 Protein of unknown function (duplicated DUF1399) -0.7 0.31 -0.3
63 AT1G53240 Lactate/malate dehydrogenase family protein mitochondrial malate dehydrogenase
1		 0.7 0.31 -0.3
64 AT4G20880 ethylene-responsive nuclear protein / ethylene-regulated
nuclear protein (ERT2)		 -0.69 0.3 -0.31
65 AT1G69270 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.68 0.31 -0.31
66 AT5G63560 HXXXD-type acyl-transferase family protein -0.68 0.32 -0.31
67 AT3G53980 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.29 -0.3
68 AT1G52690 Late embryogenesis abundant protein (LEA) family protein LATE EMBRYOGENESIS ABUNDANT 7 -0.66 0.35 -0.32
69 AT5G53890 phytosylfokine-alpha receptor 2 AtPSKR2, phytosylfokine-alpha
receptor 2		 -0.66 0.32 -0.3
70 AT1G14730 Cytochrome b561/ferric reductase transmembrane protein
family		 -0.66 0.32 -0.31
71 AT5G50360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G48510.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.65 0.31 -0.32
72 AT5G63800 Glycosyl hydrolase family 35 protein beta-galactosidase 6,
MUCILAGE-MODIFIED 2		 -0.64 0.31 -0.32
73 AT1G48130 1-cysteine peroxiredoxin 1 1-cysteine peroxiredoxin 1,
1-cysteine peroxiredoxin 1		 -0.64 0.31 -0.32
74 AT4G28040 nodulin MtN21 /EamA-like transporter family protein -0.64 0.31 -0.3
75 AT5G44310 Late embryogenesis abundant protein (LEA) family protein -0.63 0.3 -0.32
76 AT1G67920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits
to 22 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.32 -0.32
77 AT5G53870 early nodulin-like protein 1 AtENODL1, early nodulin-like
protein 1		 -0.62 0.31 -0.31
78 AT3G25990 Homeodomain-like superfamily protein -0.6 0.29 -0.3
79 AT3G01080 WRKY DNA-binding protein 58 WRKY DNA-BINDING PROTEIN 58, WRKY
DNA-binding protein 58		 -0.6 0.32 -0.32
80 AT4G19810 Glycosyl hydrolase family protein with chitinase insertion
domain		 class V chitinase -0.6 0.32 -0.32