AT3G53260 : ATPAL2
Query Information
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AGICode AT3G53260
Description phenylalanine ammonia-lyase 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G53260 phenylalanine ammonia-lyase 2 ATPAL2, phenylalanine
ammonia-lyase 2		 1 0.32 -0.32
2 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 0.8 0.32 -0.32
3 AT3G26890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits
to 383 proteins in 134 species: Archae - 0; Bacteria - 61;
Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.76 0.33 -0.33
4 AT5G05270 Chalcone-flavanone isomerase family protein 0.75 0.33 -0.33
5 AT5G20180 Ribosomal protein L36 0.74 0.32 -0.31
6 AT4G34030 3-methylcrotonyl-CoA carboxylase 3-methylcrotonyl-CoA carboxylase -0.73 0.29 -0.34
7 AT5G03340 ATPase, AAA-type, CDC48 protein 0.73 0.32 -0.31
8 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 0.72 0.34 -0.31
9 AT1G73920 alpha/beta-Hydrolases superfamily protein -0.72 0.31 -0.32
10 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 -0.72 0.33 -0.31
11 AT5G16320 FRIGIDA like 1 FRIGIDA like 1 0.71 0.32 -0.31
12 AT1G61730 DNA-binding storekeeper protein-related transcriptional
regulator		 0.71 0.31 -0.34
13 AT4G23200 cysteine-rich RLK (RECEPTOR-like protein kinase) 12 cysteine-rich RLK (RECEPTOR-like
protein kinase) 12		 0.7 0.32 -0.31
14 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 0.7 0.32 -0.29
15 AT4G29040 regulatory particle AAA-ATPase 2A regulatory particle AAA-ATPase 2A 0.7 0.33 -0.33
16 AT5G18400 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S
biogenesis		 0.7 0.32 -0.32
17 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.7 0.32 -0.31
18 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 0.69 0.31 -0.28
19 AT1G54120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits
to 23 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.31 -0.31
20 AT1G80920 Chaperone DnaJ-domain superfamily protein AtJ8, translocon at the outer
envelope membrane of chloroplasts
12, J8, translocon at the outer
envelope membrane of chloroplasts
12		 -0.68 0.32 -0.29
21 AT2G20670 Protein of unknown function (DUF506) -0.68 0.31 -0.31
22 AT5G01340 Mitochondrial substrate carrier family protein AtmSFC1, mitochondrial
succinate-fumarate carrier 1		 0.68 0.32 -0.32
23 AT2G39570 ACT domain-containing protein ACT domain repeats 9 -0.68 0.32 -0.32
24 AT2G22660 Protein of unknown function (duplicated DUF1399) -0.68 0.33 -0.33
25 AT3G53880 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C11		 0.67 0.3 -0.32
26 AT4G14690 Chlorophyll A-B binding family protein EARLY LIGHT-INDUCIBLE PROTEIN 2 0.67 0.34 -0.33
27 AT1G65060 4-coumarate:CoA ligase 3 4-coumarate:CoA ligase 3 0.67 0.33 -0.32
28 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.67 0.3 -0.32
29 AT5G23380 Protein of unknown function (DUF789) -0.67 0.33 -0.3
30 AT2G38290 ammonium transporter 2 ammonium transporter 2, AMMONIUM
TRANSPORTER 2;1, ammonium
transporter 2		 0.67 0.31 -0.32
31 AT5G23760 Copper transport protein family 0.67 0.33 -0.31
32 AT3G16530 Legume lectin family protein 0.66 0.31 -0.31
33 AT5G54970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.32 -0.29
34 AT1G80790 XH/XS domain-containing protein factor of DNA methylation 5 -0.66 0.32 -0.33
35 AT5G13930 Chalcone and stilbene synthase family protein ATCHS, CHALCONE SYNTHASE,
TRANSPARENT TESTA 4		 0.66 0.31 -0.35
36 AT5G51970 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.65 0.31 -0.31
37 AT1G10370 Glutathione S-transferase family protein GLUTATHIONE S-TRANSFERASE TAU 17,
EARLY-RESPONSIVE TO DEHYDRATION 9,
GLUTATHIONE S-TRANSFERASE 30,
GLUTATHIONE S-TRANSFERASE 30B,
GLUTATHIONE S-TRANSFERASE U17		 0.65 0.32 -0.32
38 AT5G36890 beta glucosidase 42 beta glucosidase 42 0.65 0.28 -0.33
39 AT1G43170 ribosomal protein 1 ribosomal protein 1, embryo
defective 2207, ribosomal protein
1, RPL3A		 0.65 0.32 -0.31
40 AT2G22520 unknown protein; Has 186 Blast hits to 37 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4;
Plants - 17; Viruses - 0; Other Eukaryotes - 165 (source:
NCBI BLink).		 0.64 0.31 -0.31
41 AT5G27990 Pre-rRNA-processing protein TSR2, conserved region 0.64 0.3 -0.34
42 AT4G37445 BEST Arabidopsis thaliana protein match is: Calcium-binding
EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.3 -0.32
43 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.63 0.3 -0.33
44 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 0.63 0.3 -0.32
45 AT5G03370 acylphosphatase family 0.63 0.34 -0.32
46 AT5G36910 thionin 2.2 thionin 2.2 0.63 0.33 -0.32
47 AT1G78240 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OSU1, QUASIMODO2, TUMOROUS SHOOT
DEVELOPMENT 2		 0.63 0.3 -0.32
48 AT1G78570 rhamnose biosynthesis 1 ARABIDOPSIS THALIANA RHAMNOSE
BIOSYNTHESIS 1, rhamnose
biosynthesis 1, REPRESSOR OF LRX1
1		 0.63 0.31 -0.34
49 AT5G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.32 -0.33
50 AT3G09540 Pectin lyase-like superfamily protein 0.62 0.31 -0.31
51 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 -0.62 0.32 -0.32
52 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 0.62 0.33 -0.31
53 AT4G05450 mitochondrial ferredoxin 1 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 1, mitochondrial
ferredoxin 1		 0.62 0.33 -0.32
54 AT3G51240 flavanone 3-hydroxylase F3'H, flavanone 3-hydroxylase,
TRANSPARENT TESTA 6		 0.61 0.3 -0.31
55 AT4G28020 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0066
(InterPro:IPR001378); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.61 0.31 -0.33
56 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 0.61 0.3 -0.32
57 AT3G07090 PPPDE putative thiol peptidase family protein 0.61 0.31 -0.32
58 AT5G05750 DNAJ heat shock N-terminal domain-containing protein 0.61 0.3 -0.31
59 AT1G06000 UDP-Glycosyltransferase superfamily protein 0.61 0.31 -0.3
60 AT1G73760 RING/U-box superfamily protein 0.61 0.31 -0.32
61 AT1G52280 RAB GTPase homolog G3D RAB GTPase homolog G3D, RAB GTPase
homolog G3D		 0.61 0.3 -0.34
62 AT4G13520 small acidic protein 1 small acidic protein 1 0.61 0.31 -0.33
63 AT1G62150 Mitochondrial transcription termination factor family
protein		 0.61 0.29 -0.34
64 AT5G52640 heat shock protein 90.1 ATHS83, HEAT SHOCK PROTEIN 90-1,
heat shock protein 90.1, HEAT
SHOCK PROTEIN 81-1, HSP81.1, HEAT
SHOCK PROTEIN 83, heat shock
protein 90.1		 0.61 0.32 -0.32
65 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.6 0.31 -0.31
66 AT4G35770 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARABIDOPSIS THALIANA SENESCENCE 1,
DARK INDUCIBLE 1, SENESCENCE 1,
SENESCENCE ASSOCIATED GENE 1		 -0.6 0.32 -0.3
67 AT5G06820 STRUBBELIG-receptor family 2 STRUBBELIG-receptor family 2 -0.6 0.32 -0.31
68 AT1G77760 nitrate reductase 1 GNR1, nitrate reductase 1, NITRATE
REDUCTASE 1		 -0.6 0.3 -0.34
69 AT1G06450 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.6 0.32 -0.32
70 AT1G31650 RHO guanyl-nucleotide exchange factor 14 ATROPGEF14, RHO guanyl-nucleotide
exchange factor 14		 -0.6 0.31 -0.32
71 AT3G27580 Protein kinase superfamily protein ATPK7, D6 PROTEIN KINASE LIKE 3 -0.6 0.31 -0.31
72 AT5G15360 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.3 -0.32
73 AT1G71440 tubulin folding cofactor E / Pfifferling (PFI) PFIFFERLING, TUBULIN-FOLDING
COFACTOR E		 0.59 0.31 -0.31
74 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 -0.59 0.33 -0.32
75 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 -0.59 0.33 -0.31
76 AT1G59970 Matrixin family protein 0.59 0.31 -0.3
77 AT4G09420 Disease resistance protein (TIR-NBS class) 0.59 0.32 -0.3
78 AT1G65960 glutamate decarboxylase 2 glutamate decarboxylase 2 0.59 0.33 -0.31
79 AT5G03200 RING/U-box superfamily protein 0.59 0.31 -0.32
80 AT1G71990 fucosyltransferase 13 ARABIDOPSIS FUCOSYLTRANSFERASE 4,
ATFUT13, FT4-M, FUCTC,
fucosyltransferase 13		 -0.58 0.33 -0.33
81 AT1G67830 alpha-fucosidase 1 Arabidopsis thaliana
alpha-fucosidase 1,
alpha-fucosidase 1		 -0.58 0.31 -0.31
82 AT3G47000 Glycosyl hydrolase family protein -0.58 0.31 -0.31
83 AT3G13450 Transketolase family protein DARK INDUCIBLE 4 -0.58 0.31 -0.32
84 AT1G12790 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like
(InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.32 -0.29
85 AT2G25080 glutathione peroxidase 1 GLUTATHIONE PEROXIDASE 1,
glutathione peroxidase 1		 -0.57 0.3 -0.31
86 AT3G58890 RNI-like superfamily protein -0.57 0.3 -0.33
87 AT1G72160 Sec14p-like phosphatidylinositol transfer family protein -0.57 0.3 -0.33
88 AT5G56570 Leucine-rich repeat (LRR) family protein -0.57 0.33 -0.33
89 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.32 -0.31
90 AT5G57790 unknown protein; Has 13 Blast hits to 11 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.33 -0.33
91 AT5G25640 Rhomboid-related intramembrane serine protease family
protein		 -0.55 0.31 -0.31
92 AT2G29390 sterol 4-alpha-methyl-oxidase 2-2 STEROL 4-ALPHA-METHYL-OXIDASE 2,
Arabidopsis thaliana sterol
4-alpha-methyl-oxidase 2-2, sterol
4-alpha-methyl-oxidase 2-2		 -0.55 0.31 -0.32
93 AT1G09010 glycoside hydrolase family 2 protein -0.55 0.3 -0.31
94 AT1G64100 pentatricopeptide (PPR) repeat-containing protein -0.53 0.33 -0.31
95 AT4G00335 RING-H2 finger B1A RING-H2 finger B1A -0.53 0.29 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
96 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine 0.92 0.45 -0.46 C0038
97 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.88 0.46 -0.46 C0033
98 C0183 MST_3033.1 - - - 0.8 0.44 -0.44
99 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.68 0.3 -0.3 C0034
100 C0162 MST_1588.3 - - - -0.64 0.45 -0.46