AT3G53090 : ubiquitin-protein ligase 7
Query Information
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AGICode AT3G53090
Description ubiquitin-protein ligase 7
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 1 0.33 -0.31
2 AT1G13200 F-box and associated interaction domains-containing protein 0.75 0.32 -0.32
3 AT2G06820 transposable element gene 0.73 0.31 -0.31
4 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 0.72 0.33 -0.29
5 AT2G30620 winged-helix DNA-binding transcription factor family
protein		 -0.72 0.31 -0.32
6 AT1G44050 Cysteine/Histidine-rich C1 domain family protein -0.72 0.33 -0.33
7 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 -0.72 0.3 -0.33
8 AT5G26240 chloride channel D ATCLC-D, chloride channel D 0.71 0.32 -0.3
9 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 -0.71 0.33 -0.31
10 AT5G28590 DNA-binding family protein 0.7 0.3 -0.32
11 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.7 0.3 -0.32
12 AT1G11260 sugar transporter 1 SUGAR TRANSPORTER 1, sugar
transporter 1		 -0.7 0.32 -0.3
13 AT1G35970 transposable element gene 0.69 0.3 -0.32
14 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.34 -0.31
15 AT1G73250 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 ACTIVATING TRANSCRIPTION FACTOR 5,
GDP-4-keto-6-deoxymannose-3,5-epim
erase-4-reductase 1		 -0.69 0.31 -0.3
16 AT1G09550 Pectinacetylesterase family protein 0.69 0.32 -0.32
17 AT2G15860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.69 0.34 -0.32
18 AT1G22860 Vacuolar sorting protein 39 0.68 0.3 -0.32
19 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 -0.68 0.3 -0.3
20 AT3G57570 ARM repeat superfamily protein 0.68 0.32 -0.33
21 AT2G17975 zinc finger (Ran-binding) family protein 0.68 0.3 -0.32
22 AT1G24330 ARM repeat superfamily protein 0.68 0.32 -0.34
23 AT2G36670 Eukaryotic aspartyl protease family protein 0.68 0.34 -0.33
24 AT3G19760 eukaryotic initiation factor 4A-III eukaryotic initiation factor
4A-III		 -0.68 0.3 -0.31
25 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 0.68 0.3 -0.32
26 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 0.68 0.32 -0.31
27 AT1G59535 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.31 -0.32
28 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 0.67 0.3 -0.33
29 AT5G15725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.32 -0.33
30 AT3G47660 Regulator of chromosome condensation (RCC1) family protein -0.67 0.32 -0.31
31 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 0.67 0.31 -0.31
32 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 0.67 0.31 -0.29
33 AT4G21326 subtilase 3.12 subtilase 3.12, subtilase 3.12 0.66 0.29 -0.32
34 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.66 0.31 -0.3
35 AT2G17110 Protein of unknown function (DUF630 and DUF632) 0.66 0.32 -0.33
36 AT1G35620 PDI-like 5-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 8, PDI-like
5-2, PROTEIN DISULFIDE ISOMERASE
8, PDI-like 5-2		 -0.66 0.29 -0.31
37 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 0.65 0.3 -0.3
38 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 0.65 0.29 -0.31
39 ATMG00400 hypothetical protein ORF157 0.65 0.31 -0.32
40 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 0.65 0.31 -0.32
41 AT1G14750 Cyclin family protein SOLO DANCERS -0.65 0.3 -0.32
42 AT4G11730 Cation transporter/ E1-E2 ATPase family protein -0.65 0.32 -0.32
43 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 0.65 0.34 -0.3
44 AT1G60270 beta glucosidase 6 beta glucosidase 6 0.65 0.31 -0.33
45 AT3G20620 F-box family protein-related 0.65 0.33 -0.31
46 AT4G18920 Protein of unknown function (DUF1264) -0.65 0.34 -0.31
47 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.65 0.31 -0.33
48 AT3G16050 pyridoxine biosynthesis 1.2 A37, ARABIDOPSIS THALIANA
PYRIDOXINE BIOSYNTHESIS 1.2,
pyridoxine biosynthesis 1.2		 -0.64 0.3 -0.32
49 AT1G03350 BSD domain-containing protein -0.64 0.3 -0.32
50 AT3G21810 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.64 0.32 -0.33
51 AT5G14240 Thioredoxin superfamily protein -0.64 0.32 -0.31
52 AT1G50410 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 0.64 0.32 -0.33
53 AT3G28890 receptor like protein 43 receptor like protein 43, receptor
like protein 43		 0.64 0.3 -0.3
54 AT5G08210 MIR834a; miRNA microRNA834A 0.64 0.34 -0.34
55 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.34 -0.31
56 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 0.64 0.32 -0.33
57 AT3G11240 arginine-tRNA protein transferase 2 ATATE2, arginine-tRNA protein
transferase 2		 0.64 0.33 -0.31
58 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 0.64 0.32 -0.35
59 AT4G02190 Cysteine/Histidine-rich C1 domain family protein -0.64 0.29 -0.33
60 AT4G11950 Protein of unknown function (DUF1191) 0.64 0.31 -0.3
61 AT2G31780 RING/U-box superfamily protein ARIADNE 11, ARABIDOPSIS ARIADNE 11 0.63 0.3 -0.34
62 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein -0.63 0.3 -0.31
63 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 0.63 0.31 -0.31
64 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 0.63 0.31 -0.32
65 AT4G31280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.3 -0.32
66 AT3G48770 DNA binding;ATP binding 0.63 0.31 -0.31
67 AT3G49910 Translation protein SH3-like family protein -0.62 0.33 -0.3
68 AT2G03140 alpha/beta-Hydrolases superfamily protein 0.62 0.33 -0.31
69 AT1G49560 Homeodomain-like superfamily protein -0.62 0.32 -0.33
70 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.62 0.32 -0.32
71 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 0.62 0.32 -0.31
72 AT4G25570 Cytochrome b561/ferric reductase transmembrane protein
family		 ACYB-2 -0.62 0.32 -0.31
73 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.3 -0.32
74 AT2G33020 receptor like protein 24 receptor like protein 24, receptor
like protein 24		 0.62 0.33 -0.32
75 AT3G04280 response regulator 22 response regulator 22, response
regulator 22		 -0.62 0.32 -0.3
76 AT5G37890 Protein with RING/U-box and TRAF-like domains -0.62 0.32 -0.29
77 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.33 -0.29
78 AT4G29390 Ribosomal protein S30 family protein -0.62 0.32 -0.31
79 AT4G35930 F-box family protein -0.62 0.33 -0.32
80 AT3G23040 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.33 -0.3
81 AT1G05070 Protein of unknown function (DUF1068) -0.62 0.32 -0.32
82 AT3G59100 glucan synthase-like 11 glucan synthase-like 11, gsl11,
glucan synthase-like 11		 0.62 0.32 -0.33
83 AT1G60450 galactinol synthase 7 galactinol synthase 7, galactinol
synthase 7		 0.62 0.35 -0.29
84 AT4G13020 Protein kinase superfamily protein MHK 0.62 0.33 -0.3
85 AT1G65570 Pectin lyase-like superfamily protein -0.61 0.3 -0.32
86 AT2G36370 ubiquitin-protein ligases 0.61 0.34 -0.33
87 AT1G67620 Lojap-related protein -0.61 0.31 -0.32
88 AT2G11270 citrate synthase-related 0.61 0.3 -0.31
89 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 0.61 0.32 -0.31
90 AT5G07430 Pectin lyase-like superfamily protein -0.61 0.31 -0.32
91 AT4G22620 SAUR-like auxin-responsive protein family -0.61 0.31 -0.32
92 AT2G25850 poly(A) polymerase 2 poly(A) polymerase 2 0.6 0.31 -0.31
93 AT5G01110 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.34 -0.29
94 AT3G23870 Protein of unknown function (DUF803) 0.6 0.29 -0.33
95 AT2G06110 transposable element gene 0.6 0.33 -0.33
96 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.6 0.31 -0.32
97 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein 0.6 0.3 -0.3
98 AT3G01340 Transducin/WD40 repeat-like superfamily protein -0.6 0.3 -0.32
99 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A -0.6 0.31 -0.32
100 AT1G72830 nuclear factor Y, subunit A3 ATHAP2C, HAP2C, nuclear factor Y,
subunit A3		 0.6 0.31 -0.31
101 AT4G23980 auxin response factor 9 auxin response factor 9 0.6 0.32 -0.32
102 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 0.6 0.32 -0.32
103 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 -0.59 0.3 -0.32
104 AT2G15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40
(CYP40) / rotamase		 CYCLOPHILIN 40, SQUINT -0.59 0.33 -0.34
105 AT2G38320 TRICHOME BIREFRINGENCE-LIKE 34 TRICHOME BIREFRINGENCE-LIKE 34 -0.59 0.31 -0.32
106 AT1G02670 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.32 -0.31
107 AT3G03160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.35
108 AT1G13540 Protein of unknown function (DUF1262) -0.59 0.31 -0.32
109 AT3G56890 F-box associated ubiquitination effector family protein 0.59 0.32 -0.32
110 AT2G46560 transducin family protein / WD-40 repeat family protein 0.59 0.31 -0.32
111 AT4G15410 serine/threonine protein phosphatase 2A 55 kDa regulatory
subunit B prime gamma		 serine/threonine protein
phosphatase 2A 55 kDa regulatory
subunit B prime gamma		 -0.59 0.33 -0.31
112 AT5G58550 ETO1-like 2 ETO1-like 2 0.59 0.3 -0.32
113 AT1G19485 Transducin/WD40 repeat-like superfamily protein 0.59 0.31 -0.3
114 AT1G78150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits
to 146 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.32 -0.31
115 AT5G61740 ABC2 homolog 14 ATP-binding cassette A10,
ARABIDOPSIS THALIANA ABC2 HOMOLOG
14, ABC2 homolog 14		 0.59 0.3 -0.31
116 AT2G25740 ATP-dependent protease La (LON) domain protein 0.59 0.32 -0.33
117 AT3G04220 Disease resistance protein (TIR-NBS-LRR class) family 0.59 0.31 -0.3
118 AT3G28560 BCS1 AAA-type ATPase -0.58 0.34 -0.3
119 AT1G48900 Signal recognition particle, SRP54 subunit protein -0.58 0.32 -0.3
120 AT5G24240 Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family
protein		 -0.58 0.32 -0.36
121 AT3G44570 Arabidopsis retrotransposon ORF-1 protein -0.58 0.32 -0.32
122 AT3G16730 CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex,
subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to
211 proteins in 82 species: Archae - 0; Bacteria - 0;
Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 hypersensitive to excess boron 2 -0.58 0.31 -0.33
123 AT1G23570 Domain of unknown function (DUF220) -0.57 0.31 -0.31
124 AT1G04700 PB1 domain-containing protein tyrosine kinase -0.57 0.33 -0.33
125 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 -0.57 0.31 -0.28
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
126 C0127 Isorhamnetin-hexosyl-rhamnoside - - - -0.66 0.42 -0.43
127 C0187 Neoeriocitrin - - - -0.59 0.43 -0.45