AT3G52830 : -
Query Information
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AGICode AT3G52830
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G54700.1); Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G52830 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is: Ankyrin
repeat family protein (TAIR:AT5G54700.1); Has 6 Blast hits
to 6 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 1 0.31 -0.33
2 AT1G21540 AMP-dependent synthetase and ligase family protein -0.74 0.3 -0.29
3 AT5G50250 chloroplast RNA-binding protein 31B chloroplast RNA-binding protein
31B		 -0.72 0.31 -0.3
4 AT5G16240 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 -0.7 0.32 -0.32
5 AT5G17840 DnaJ/Hsp40 cysteine-rich domain superfamily protein -0.7 0.3 -0.31
6 AT1G14310 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.69 0.31 -0.31
7 AT1G10060 branched-chain amino acid transaminase 1 branched-chain amino acid
transaminase 1, branched-chain
amino acid transaminase 1		 -0.68 0.33 -0.35
8 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 0.68 0.33 -0.32
9 AT3G10670 non-intrinsic ABC protein 7 ATP-binding cassette I6,
non-intrinsic ABC protein 7,
non-intrinsic ABC protein 7		 -0.67 0.31 -0.33
10 AT3G57990 unknown protein; Has 1497 Blast hits to 1323 proteins in 52
species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi -
34; Plants - 61; Viruses - 0; Other Eukaryotes - 1375
(source: NCBI BLink).		 -0.67 0.32 -0.31
11 AT2G03050 Mitochondrial transcription termination factor family
protein		 EMBRYO DEFECTIVE 93, SINGLET
OXYGEN-LINKED DEATH ACTIVATOR 10		 -0.67 0.3 -0.35
12 AT5G55710 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Uncharacterised
conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 translocon at the inner envelope
membrane of chloroplasts 20-V,
translocon at the inner envelope
membrane of chloroplasts 20-V		 -0.66 0.3 -0.32
13 AT2G33450 Ribosomal L28 family -0.66 0.32 -0.3
14 AT3G24590 plastidic type i signal peptidase 1 plastidic type i signal peptidase
1		 -0.66 0.3 -0.31
15 AT1G69526 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.66 0.31 -0.31
16 AT1G62780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; Has 94
Blast hits to 94 proteins in 35 species: Archae - 6;
Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 -0.65 0.3 -0.34
17 AT4G33680 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 ABERRANT GROWTH AND DEATH 2 -0.65 0.32 -0.31
18 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein 0.65 0.33 -0.32
19 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein -0.65 0.32 -0.32
20 AT2G03780 Translin family protein -0.64 0.3 -0.31
21 AT4G35450 ankyrin repeat-containing protein 2 AFT, ankyrin repeat-containing
protein 2, AKR2A		 -0.64 0.31 -0.3
22 AT3G46100 Histidyl-tRNA synthetase 1 Histidyl-tRNA synthetase 1,
Histidyl-tRNA synthetase 1		 -0.64 0.3 -0.33
23 AT2G26550 heme oxygenase 2 heme oxygenase 2 -0.64 0.31 -0.33
24 AT4G01690 Flavin containing amine oxidoreductase family HEMG1, PPO1, PPOX -0.64 0.3 -0.32
25 AT5G49880 mitotic checkpoint family protein 0.64 0.31 -0.32
26 AT5G10460 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.64 0.32 -0.29
27 AT1G12410 CLP protease proteolytic subunit 2 CLP protease proteolytic subunit
2, CLPR2, EMBRYO DEFECTIVE 3146,
NUCLEAR-ENCODED CLP PROTEASE P2		 -0.63 0.32 -0.32
28 AT4G13220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 27 Blast hits to 27 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.63 0.34 -0.32
29 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 -0.62 0.33 -0.31
30 AT5G06980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G12320.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.32 -0.32
31 AT1G69740 Aldolase superfamily protein HEMB1 -0.62 0.32 -0.3
32 AT1G05577 Domain of unknown function (DUF966) 0.62 0.31 -0.3
33 AT5G06240 embryo defective 2735 embryo defective 2735 -0.62 0.32 -0.31
34 AT5G52110 Protein of unknown function (DUF2930) COFACTOR ASSEMBLY OF COMPLEX C,
HIGH CHLOROPHYLL FLUORESCENCE 208		 -0.62 0.29 -0.3
35 AT2G24020 Uncharacterised BCR, YbaB family COG0718 -0.61 0.31 -0.32
36 AT2G25790 Leucine-rich receptor-like protein kinase family protein 0.61 0.33 -0.32
37 AT1G71750 Hypoxanthine-guanine phosphoribosyltransferase Hypoxanthine-guanine
phosphoribosyltransferase		 -0.61 0.31 -0.33
38 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2499 (InterPro:IPR019634);
Has 319 Blast hits to 317 proteins in 103 species: Archae -
0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).		 -0.61 0.32 -0.32
39 AT2G17230 EXORDIUM like 5 EXORDIUM like 5 -0.61 0.3 -0.3
40 AT4G26430 COP9 signalosome subunit 6B COP9 signalosome subunit 6B -0.61 0.31 -0.33
41 AT1G75180 Erythronate-4-phosphate dehydrogenase family protein -0.6 0.32 -0.31
42 AT3G53620 pyrophosphorylase 4 pyrophosphorylase 4,
pyrophosphorylase 4		 -0.6 0.32 -0.32
43 AT5G08520 Duplicated homeodomain-like superfamily protein -0.6 0.34 -0.32
44 AT1G55805 BolA-like family protein -0.6 0.31 -0.34
45 AT1G05710 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.6 0.32 -0.34
46 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 -0.6 0.31 -0.33
47 AT2G34590 Transketolase family protein -0.6 0.3 -0.32
48 AT1G19740 ATP-dependent protease La (LON) domain protein -0.6 0.3 -0.32
49 AT2G17540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G35510.1); Has 39 Blast
hits to 39 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.6 0.32 -0.33
50 AT5G42520 basic pentacysteine 6 ARABIDOPSIS THALIANA BASIC
PENTACYSTEINE 6, BBR/BPC6, basic
pentacysteine 6		 -0.6 0.31 -0.31
51 AT5G58003 C-terminal domain phosphatase-like 4 C-terminal domain phosphatase-like
4		 -0.59 0.33 -0.31
52 AT5G04730 Ankyrin-repeat containing protein -0.59 0.31 -0.31
53 AT2G29700 pleckstrin homologue 1 pleckstrin homologue 1, pleckstrin
homologue 1		 -0.59 0.31 -0.34
54 AT3G57560 N-acetyl-l-glutamate kinase N-acetyl-l-glutamate kinase -0.59 0.31 -0.31
55 AT3G49810 ARM repeat superfamily protein 0.59 0.33 -0.32
56 AT5G49350 Glycine-rich protein family 0.59 0.33 -0.29
57 AT5G64480 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.59 0.32 -0.32
58 AT5G51180 alpha/beta-Hydrolases superfamily protein -0.59 0.3 -0.29
59 AT5G17710 Co-chaperone GrpE family protein embryo defective 1241 -0.59 0.31 -0.31
60 AT2G28720 Histone superfamily protein -0.59 0.33 -0.3
61 AT1G32120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like,
plant mobile domain (InterPro:IPR019557), Protein of
unknown function DUF716 (InterPro:IPR006904); BEST
Arabidopsis thaliana protein match is:
Aminotransferase-like, plant mobile domain family protein
(TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins
in 576 species: Archae - 4; Bacteria - 1182; Metazoa -
7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other
Eukaryotes - 4469 (source: NCBI BLink).		 0.59 0.3 -0.31
62 AT3G09750 Galactose oxidase/kelch repeat superfamily protein 0.59 0.32 -0.35
63 AT4G17640 casein kinase II beta chain 2 casein kinase II beta chain 2 -0.59 0.33 -0.34
64 AT5G53800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.32 -0.32
65 AT1G11420 DOMAIN OF UNKNOWN FUNCTION 724 2 DOMAIN OF UNKNOWN FUNCTION 724 2,
DOMAIN OF UNKNOWN FUNCTION 724 2		 0.57 0.33 -0.3
66 AT5G61150 leo1-like family protein VERNALIZATION INDEPENDENCE 4 0.57 0.32 -0.32
67 AT5G48100 Laccase/Diphenol oxidase family protein ATLAC15, LACCASE-LIKE 15,
TRANSPARENT TESTA 10		 0.57 0.31 -0.32
68 AT3G25400 CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase
MazG-related, RS21-C6 (InterPro:IPR011394), EAR
(InterPro:IPR009039), NTP pyrophosphohydrolase MazG,
putative catalytic core (InterPro:IPR004518); Has 1123
Blast hits to 1121 proteins in 452 species: Archae - 22;
Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83;
Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).		 0.54 0.33 -0.33
69 AT2G04490 transposable element gene 0.54 0.29 -0.31
70 AT4G02160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61710.1); Has 35 Blast hits
to 35 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.31 -0.33
71 AT1G55240 Family of unknown function (DUF716) 0.53 0.32 -0.31
72 AT2G45920 U-box domain-containing protein 0.53 0.3 -0.3
73 AT1G68420 Class II aaRS and biotin synthetases superfamily protein 0.53 0.32 -0.3
74 AT4G00960 Protein kinase superfamily protein 0.52 0.34 -0.3
75 AT5G38370 Protein of unknown function (DUF1644) 0.52 0.29 -0.32
76 AT3G48920 myb domain protein 45 myb domain protein 45, myb domain
protein 45		 0.51 0.32 -0.31
77 AT1G80580 Integrase-type DNA-binding superfamily protein 0.51 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0018 sn-Glycerol-3-phosphate D,L-sn-Glycerol-3-phosphate sn-Glycerol-3-phosphate CDP-diacylglycerol biosynthesis II,
phosphatidylglycerol biosynthesis II (non-plastidic),
triacylglycerol biosynthesis,
glycerol degradation IV,
glycerol-3-phosphate shuttle,
a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate,
CDP-diacylglycerol biosynthesis I,
cardiolipin biosynthesis II,
phosphatidylglycerol biosynthesis I (plastidic),
sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate,
an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate 		-0.63 0.45 -0.45 C0018