AT3G52860 : -
Query Information
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AGICode AT3G52860
Description unknown protein; Has 86 Blast hits to 86 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi - 13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G52860 unknown protein; Has 86 Blast hits to 86 proteins in 36
species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi -
13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 1 0.31 -0.31
2 AT5G09880 Splicing factor, CC1-like -0.78 0.33 -0.31
3 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.75 0.32 -0.33
4 AT3G18100 myb domain protein 4r1 myb domain protein 4R1, myb domain
protein 4r1		 -0.74 0.32 -0.33
5 AT4G02010 Protein kinase superfamily protein -0.74 0.31 -0.29
6 AT1G33780 Protein of unknown function (DUF179) 0.74 0.31 -0.32
7 AT4G13950 ralf-like 31 ralf-like 31 0.73 0.33 -0.33
8 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.73 0.32 -0.32
9 AT1G05910 cell division cycle protein 48-related / CDC48-related -0.72 0.34 -0.34
10 AT5G47420 Tryptophan RNA-binding attenuator protein-like 0.72 0.32 -0.31
11 AT1G23960 Protein of unknown function (DUF626) 0.72 0.31 -0.31
12 AT3G18295 Protein of unknown function (DUF1639) 0.72 0.34 -0.31
13 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 0.71 0.31 -0.32
14 AT5G45400 Replication factor-A protein 1-related ATRPA70C, RPA70C -0.71 0.33 -0.31
15 AT1G71130 Integrase-type DNA-binding superfamily protein cytokinin response factor 8 0.71 0.32 -0.32
16 AT5G18620 chromatin remodeling factor17 chromatin remodeling factor17 -0.71 0.33 -0.31
17 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 0.7 0.32 -0.3
18 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 -0.7 0.35 -0.3
19 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.34 -0.36
20 AT1G23020 ferric reduction oxidase 3 FERRIC REDUCTION OXIDASE 3, ferric
reduction oxidase 3		 0.69 0.34 -0.32
21 AT3G63080 glutathione peroxidase 5 glutathione peroxidase 5,
glutathione peroxidase 5, maternal
effect embryo arrest 42		 0.69 0.31 -0.3
22 AT1G12780 UDP-D-glucose/UDP-D-galactose 4-epimerase 1 A. THALIANA UDP-GLC 4-EPIMERASE 1,
UDP-D-glucose/UDP-D-galactose
4-epimerase 1		 0.69 0.31 -0.34
23 AT2G23380 SET domain-containing protein CURLY LEAF, INCURVATA 1, SETDOMAIN
GROUP 1, SETDOMAIN 1		 -0.69 0.33 -0.31
24 AT5G17440 LUC7 related protein -0.69 0.34 -0.32
25 AT5G07130 laccase 13 laccase 13 -0.68 0.32 -0.32
26 AT1G79950 RAD3-like DNA-binding helicase protein -0.68 0.33 -0.34
27 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.68 0.31 -0.31
28 AT5G40480 embryo defective 3012 embryo defective 3012 -0.68 0.3 -0.32
29 AT2G18770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.29 -0.29
30 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.31 -0.31
31 AT5G58800 Quinone reductase family protein 0.67 0.28 -0.32
32 AT4G27510 unknown protein; Has 25 Blast hits to 23 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.3 -0.31
33 AT5G58220 transthyretin-like protein allantoin synthase,
transthyretin-like protein		 0.67 0.32 -0.31
34 AT1G55000 peptidoglycan-binding LysM domain-containing protein 0.67 0.31 -0.33
35 AT5G46030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF701, zinc-binding putative
(InterPro:IPR007808); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.66 0.33 -0.32
36 AT5G19120 Eukaryotic aspartyl protease family protein 0.66 0.31 -0.35
37 AT2G46490 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits
to 34 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.3 -0.3
38 AT2G34690 Glycolipid transfer protein (GLTP) family protein ACCELERATED CELL DEATH 11 0.66 0.31 -0.33
39 AT5G53530 vacuolar protein sorting 26A vacuolar protein sorting 26A 0.66 0.33 -0.33
40 AT5G16780 SART-1 family DEFECTIVELY ORGANIZED TRIBUTARIES
2, MERISTEM-DEFECTIVE		 -0.65 0.32 -0.31
41 AT1G60870 maternal effect embryo arrest 9 maternal effect embryo arrest 9 0.65 0.3 -0.33
42 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.64 0.32 -0.31
43 AT5G10870 chorismate mutase 2 chorismate mutase 2, chorismate
mutase 2		 0.64 0.32 -0.32
44 AT3G50880 DNA glycosylase superfamily protein 0.64 0.33 -0.33
45 AT3G11530 Vacuolar protein sorting 55 (VPS55) family protein 0.64 0.31 -0.32
46 AT3G42640 H(+)-ATPase 8 H(+)-ATPase 8, H(+)-ATPase 8 -0.64 0.32 -0.34
47 AT3G54860 Sec1/munc18-like (SM) proteins superfamily ATVPS33, VACUOLAR PROTEIN SORTING
33		 0.64 0.3 -0.3
48 AT2G29210 splicing factor PWI domain-containing protein -0.64 0.31 -0.33
49 AT1G26190 Phosphoribulokinase / Uridine kinase family -0.64 0.33 -0.31
50 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.63 0.33 -0.3
51 AT5G54390 HAL2-like HAL2-like, ATAHL, HAL2-like 0.63 0.3 -0.34
52 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.63 0.31 -0.31
53 AT5G51710 K+ efflux antiporter 5 ARABIDOPSIS THALIANA K+ EFFLUX
ANTIPORTER 5, K+ efflux antiporter
5		 -0.63 0.32 -0.31
54 AT3G01640 glucuronokinase G ARABIDOPSIS THALIANA
GLUCURONOKINASE, glucuronokinase G		 0.63 0.32 -0.31
55 AT1G54850 HSP20-like chaperones superfamily protein 0.63 0.32 -0.32
56 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.63 0.33 -0.3
57 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.63 0.31 -0.29
58 AT2G36360 Galactose oxidase/kelch repeat superfamily protein 0.62 0.31 -0.32
59 AT3G24315 Sec20 family protein AtSec20 0.62 0.31 -0.31
60 AT5G62930 SGNH hydrolase-type esterase superfamily protein 0.62 0.32 -0.31
61 AT2G29390 sterol 4-alpha-methyl-oxidase 2-2 STEROL 4-ALPHA-METHYL-OXIDASE 2,
Arabidopsis thaliana sterol
4-alpha-methyl-oxidase 2-2, sterol
4-alpha-methyl-oxidase 2-2		 0.62 0.3 -0.34
62 AT1G47400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits
to 11 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.32 -0.33
63 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 -0.62 0.3 -0.32
64 AT5G13680 IKI3 family protein ABA-OVERLY SENSITIVE 1, AtELP1,
ELONGATA 2		 -0.62 0.32 -0.32
65 AT3G15610 Transducin/WD40 repeat-like superfamily protein 0.61 0.32 -0.31
66 AT2G28550 related to AP2.7 related to AP2.7, TARGET OF EARLY
ACTIVATION TAGGED (EAT) 1		 -0.61 0.3 -0.31
67 AT5G41080 PLC-like phosphodiesterases superfamily protein AtGDPD2, glycerophosphodiester
phosphodiesterase 2		 0.61 0.32 -0.33
68 AT5G18650 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.61 0.3 -0.34
69 AT5G02490 Heat shock protein 70 (Hsp 70) family protein AtHsp70-2, Hsp70-2 -0.61 0.31 -0.33
70 AT1G02160 Cox19 family protein (CHCH motif) 0.61 0.31 -0.32
71 AT3G56980 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH039, OBP3-RESPONSIVE GENE 3 0.61 0.29 -0.32
72 AT4G21780 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.61 0.32 -0.32
73 AT3G55060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast
hits to 33720 proteins in 2065 species: Archae - 846;
Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants -
3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI
BLink).		 -0.61 0.32 -0.29
74 AT5G09740 histone acetyltransferase of the MYST family 2 histone acetyltransferase of the
MYST family 2		 0.61 0.34 -0.31
75 AT2G17530 Protein kinase superfamily protein 0.6 0.29 -0.32
76 AT1G67600 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.6 0.32 -0.3
77 AT2G17510 ribonuclease II family protein EMBRYO DEFECTIVE 2763 -0.6 0.34 -0.31
78 AT3G18120 F-box associated ubiquitination effector family protein -0.6 0.34 -0.31
79 AT3G24080 KRR1 family protein -0.6 0.3 -0.33
80 AT5G61590 Integrase-type DNA-binding superfamily protein 0.6 0.31 -0.33
81 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein 0.6 0.3 -0.32
82 AT2G28060 5'-AMP-activated protein kinase beta-2 subunit protein 0.6 0.31 -0.31
83 AT1G69180 Plant-specific transcription factor YABBY family protein CRABS CLAW -0.6 0.31 -0.3
84 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 -0.59 0.32 -0.31
85 AT1G48120 hydrolases;protein serine/threonine phosphatases -0.59 0.33 -0.31
86 AT2G38660 Amino acid dehydrogenase family protein 0.59 0.31 -0.3
87 AT2G30540 Thioredoxin superfamily protein 0.59 0.3 -0.32
88 AT1G50200 Alanyl-tRNA synthetase ACD, Alanyl-tRNA synthetase -0.58 0.32 -0.33
89 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 -0.58 0.3 -0.34
90 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.31 -0.32
91 AT3G10070 TBP-associated factor 12 TBP-associated factor 12,
TATA-ASSOCIATED FACTOR II 58		 -0.58 0.31 -0.32
92 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 -0.58 0.32 -0.32
93 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 -0.58 0.32 -0.29
94 AT3G66652 fip1 motif-containing protein -0.58 0.33 -0.29
95 AT4G18840 Pentatricopeptide repeat (PPR-like) superfamily protein -0.57 0.33 -0.31
96 AT1G15200 protein-protein interaction regulator family protein -0.57 0.31 -0.3
97 AT2G47820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G09040.1); Has 628 Blast hits
to 543 proteins in 149 species: Archae - 0; Bacteria - 106;
Metazoa - 145; Fungi - 69; Plants - 97; Viruses - 10; Other
Eukaryotes - 201 (source: NCBI BLink).		 -0.57 0.3 -0.31
98 AT4G19890 Pentatricopeptide repeat (PPR-like) superfamily protein -0.57 0.31 -0.31
99 AT1G55915 zinc ion binding -0.56 0.3 -0.33
100 AT1G72040 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.56 0.32 -0.32
101 AT5G17040 UDP-Glycosyltransferase superfamily protein -0.56 0.33 -0.3
102 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein -0.56 0.31 -0.33
103 AT5G05560 E3 ubiquitin ligase, putative EMBRYO DEFECTIVE 2771 -0.55 0.3 -0.31
104 AT4G01440 nodulin MtN21 /EamA-like transporter family protein -0.55 0.33 -0.3
105 AT1G58290 Glutamyl-tRNA reductase family protein Arabidopsis thaliana hemA 1, HEMA1 -0.55 0.31 -0.32
106 AT5G28290 NIMA-related kinase 3 NIMA-related kinase 3,
NIMA-related kinase 3		 -0.54 0.3 -0.33
107 AT3G47530 Pentatricopeptide repeat (PPR) superfamily protein -0.54 0.29 -0.32
108 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein -0.54 0.33 -0.32
109 AT1G60890 Phosphatidylinositol-4-phosphate 5-kinase family protein -0.54 0.3 -0.33
110 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 -0.54 0.32 -0.33
111 AT3G18790 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like
splicing (InterPro:IPR009360); Has 1147 Blast hits to 965
proteins in 236 species: Archae - 12; Bacteria - 13;
Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other
Eukaryotes - 483 (source: NCBI BLink).		 -0.54 0.33 -0.28