AT3G52950 : -
Query Information
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AGICode AT3G52950
Description CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G52950 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing
protein		 1 0.31 -0.31
2 AT5G57020 myristoyl-CoA:protein N-myristoyltransferase ARABIDOPSIS THALIANA
MYRISTOYL-COA:PROTEIN
N-MYRISTOYLTRANSFERASE,
myristoyl-CoA:protein
N-myristoyltransferase		 0.81 0.33 -0.33
3 AT1G66070 Translation initiation factor eIF3 subunit 0.8 0.34 -0.33
4 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.8 0.32 -0.31
5 AT1G60080 3'-5'-exoribonuclease family protein 0.8 0.31 -0.33
6 AT2G06000 Pentatricopeptide repeat (PPR) superfamily protein 0.79 0.32 -0.29
7 AT1G23090 sulfate transporter 91 sulfate transporter 91, SULTR3;3 0.77 0.31 -0.3
8 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.77 0.3 -0.31
9 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.77 0.31 -0.29
10 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.31 -0.29
11 AT2G34970 Trimeric LpxA-like enzyme 0.77 0.32 -0.34
12 AT1G09780 Phosphoglycerate mutase,
2,3-bisphosphoglycerate-independent		 2,3-biphosphoglycerate-independent
phosphoglycerate mutase 1		 0.76 0.33 -0.34
13 AT1G15810 S15/NS1, RNA-binding protein 0.76 0.3 -0.32
14 AT3G06930 protein arginine methyltransferase 4B ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 4B,
protein arginine methyltransferase
4B		 0.75 0.3 -0.32
15 AT1G70590 F-box family protein -0.75 0.33 -0.33
16 AT1G34020 Nucleotide-sugar transporter family protein 0.75 0.33 -0.3
17 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.31 -0.3
18 AT1G50740 Transmembrane proteins 14C -0.75 0.34 -0.32
19 AT3G25540 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 LONGEVITY ASSURANCE GENE 1 0.75 0.32 -0.34
20 AT1G50370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtFYPP1, flower- specific,
phytochrome-associated protein
phosphatase 1		 0.75 0.32 -0.32
21 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.75 0.3 -0.32
22 AT2G43140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.74 0.31 -0.31
23 AT4G38710 glycine-rich protein 0.74 0.31 -0.32
24 AT4G23640 Potassium transporter family protein ATKT3, KUP4, TINY ROOT HAIR 1 0.74 0.32 -0.3
25 AT4G34750 SAUR-like auxin-responsive protein family 0.74 0.3 -0.31
26 AT2G20585 nuclear fusion defective 6 NUCLEAR FUSION DEFECTIVE 6 0.73 0.31 -0.33
27 AT1G43690 ubiquitin interaction motif-containing protein 0.73 0.32 -0.32
28 AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase 0.73 0.32 -0.32
29 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.73 0.3 -0.3
30 AT1G19450 Major facilitator superfamily protein 0.72 0.33 -0.3
31 AT1G63940 monodehydroascorbate reductase 6 monodehydroascorbate reductase 6 0.72 0.31 -0.32
32 AT3G02350 galacturonosyltransferase 9 galacturonosyltransferase 9 0.72 0.29 -0.3
33 AT1G07770 ribosomal protein S15A ribosomal protein S15A 0.72 0.31 -0.34
34 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA 0.71 0.32 -0.33
35 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.35 -0.32
36 AT1G13320 protein phosphatase 2A subunit A3 protein phosphatase 2A subunit A3 0.71 0.32 -0.32
37 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 0.71 0.32 -0.32
38 AT5G56950 nucleosome assembly protein 1;3 nucleosome assembly protein 1;3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 03,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A3		 0.71 0.3 -0.3
39 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.32
40 AT1G76040 calcium-dependent protein kinase 29 calcium-dependent protein kinase
29		 -0.7 0.32 -0.31
41 AT5G24750 UDP-Glycosyltransferase superfamily protein -0.7 0.32 -0.31
42 AT5G26830 Threonyl-tRNA synthetase 0.69 0.34 -0.3
43 AT4G27730 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 6, oligopeptide
transporter 1		 0.69 0.3 -0.34
44 AT5G26780 serine hydroxymethyltransferase 2 serine hydroxymethyltransferase 2 0.68 0.32 -0.31
45 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.68 0.31 -0.34
46 AT3G26370 O-fucosyltransferase family protein 0.68 0.31 -0.32
47 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.68 0.3 -0.32
48 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 -0.68 0.31 -0.3
49 AT3G53110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 4		 0.68 0.31 -0.31
50 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.68 0.32 -0.31
51 AT3G14440 nine-cis-epoxycarotenoid dioxygenase 3 ATNCED3, nine-cis-epoxycarotenoid
dioxygenase 3, SUGAR INSENSITIVE
7, SALT TOLERANT 1		 -0.68 0.33 -0.32
52 AT5G66250 kinectin-related -0.67 0.32 -0.33
53 AT2G33580 Protein kinase superfamily protein -0.67 0.33 -0.3
54 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.66 0.31 -0.32
55 AT5G02290 Protein kinase superfamily protein NAK -0.65 0.31 -0.29
56 AT5G13170 senescence-associated gene 29 AtSWEET15, senescence-associated
gene 29, SWEET15		 -0.64 0.31 -0.32
57 AT1G60190 ARM repeat superfamily protein AtPUB19, plant U-box 19 -0.64 0.32 -0.33
58 AT1G80800 pseudogene, 40S ribosomal protein S12 (RPS12B), similar to
ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum
vulgare); blastp match of 65% identity and 4.7e-12 P-value
to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S
ribosomal protein S12 {Oryza sativa (japonica
cultivar-group)}		 -0.64 0.3 -0.3
59 AT5G45630 Protein of unknown function, DUF584 -0.63 0.3 -0.32
60 AT1G28070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits
to 77 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.31
61 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.62 0.31 -0.32
62 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 -0.61 0.3 -0.31
63 AT1G34120 inositol polyphosphate 5-phosphatase I AT5P1, MYO-INOSITOL POLYPHOSPHATE
5-PHOSPHATASE 1, ATIP5PI, inositol
polyphosphate 5-phosphatase I		 -0.61 0.32 -0.35
64 AT2G28940 Protein kinase superfamily protein -0.6 0.3 -0.33
65 AT5G14640 shaggy-like kinase 13 SHAGGY-LIKE KINASE 13, shaggy-like
kinase 13		 -0.59 0.31 -0.3
66 AT5G40910 Disease resistance protein (TIR-NBS-LRR class) family -0.58 0.31 -0.33
67 AT5G02600 Heavy metal transport/detoxification superfamily protein SODIUM POTASSIUM ROOT DEFECTIVE 1,
nuclear-enriched phloem companion
cell gene 6		 -0.58 0.31 -0.3
68 AT1G50590 RmlC-like cupins superfamily protein -0.58 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
69 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.79 0.44 -0.45 C0109
70 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.72 0.46 -0.45 C0107