AGICode | AT3G52850 |
Description | vacuolar sorting receptor homolog 1 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G52850 | vacuolar sorting receptor homolog 1 | ARABIDOPSIS THALIANA EPIDERMAL GROWTH FACTOR RECEPTOR-LIKE PROTEIN, ATELP1, ATVSR1, BP-80, BP80, binding protein of 80 kDa 1;1, BP80B, Green fluorescent seed 1, vacuolar sorting receptor homolog 1, VACUOLAR SORTING RECEPTOR 1;1 |
1 | 0.31 | -0.32 | ||
2 | AT5G27600 | long-chain acyl-CoA synthetase 7 | ATLACS7, long-chain acyl-CoA synthetase 7 |
0.92 | 0.31 | -0.3 | ||
3 | AT3G04000 | NAD(P)-binding Rossmann-fold superfamily protein | 0.92 | 0.3 | -0.3 | |||
4 | AT1G76390 | ARM repeat superfamily protein | plant U-box 43 | 0.92 | 0.31 | -0.34 | ||
5 | AT3G02875 | Peptidase M20/M25/M40 family protein | IAA-LEUCINE RESISTANT 1 | 0.92 | 0.29 | -0.32 | ||
6 | AT1G76150 | enoyl-CoA hydratase 2 | ATECH2, enoyl-CoA hydratase 2 | 0.92 | 0.31 | -0.31 | ||
7 | AT3G43270 | Plant invertase/pectin methylesterase inhibitor superfamily | 0.92 | 0.32 | -0.3 | |||
8 | AT1G17490 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 57 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.91 | 0.32 | -0.32 | |||
9 | AT4G25230 | RPM1 interacting protein 2 | RPM1 interacting protein 2 | 0.91 | 0.29 | -0.32 | ||
10 | AT3G48000 | aldehyde dehydrogenase 2B4 | aldehyde dehydrogenase 2, aldehyde dehydrogenase 2A, aldehyde dehydrogenase 2B4 |
0.91 | 0.3 | -0.32 | ||
11 | AT2G47600 | magnesium/proton exchanger | magnesium/proton exchanger, ATMHX1, magnesium/proton exchanger, MAGNESIUM/PROTON EXCHANGER 1 |
0.9 | 0.31 | -0.35 | ||
12 | AT3G06810 | acyl-CoA dehydrogenase-related | IBA-RESPONSE 3 | 0.9 | 0.33 | -0.32 | ||
13 | AT1G07750 | RmlC-like cupins superfamily protein | 0.9 | 0.32 | -0.31 | |||
14 | AT2G24180 | cytochrome p450 71b6 | cytochrome p450 71b6 | 0.9 | 0.31 | -0.31 | ||
15 | AT4G12250 | UDP-D-glucuronate 4-epimerase 5 | UDP-D-glucuronate 4-epimerase 5 | 0.9 | 0.33 | -0.33 | ||
16 | AT5G46180 | ornithine-delta-aminotransferase | ornithine-delta-aminotransferase | 0.9 | 0.31 | -0.32 | ||
17 | AT5G58350 | with no lysine (K) kinase 4 | with no lysine (K) kinase 4, ZIK2 | 0.9 | 0.3 | -0.3 | ||
18 | AT5G17630 | Nucleotide/sugar transporter family protein | -0.89 | 0.33 | -0.32 | |||
19 | AT4G32350 | Regulator of Vps4 activity in the MVB pathway protein | -0.89 | 0.33 | -0.31 | |||
20 | AT1G30690 | Sec14p-like phosphatidylinositol transfer family protein | -0.89 | 0.31 | -0.31 | |||
21 | AT3G59140 | multidrug resistance-associated protein 14 | ATP-binding cassette C10, multidrug resistance-associated protein 14, multidrug resistance-associated protein 14 |
0.89 | 0.32 | -0.3 | ||
22 | AT1G55020 | lipoxygenase 1 | ARABIDOPSIS LIPOXYGENASE 1, lipoxygenase 1 |
0.89 | 0.34 | -0.33 | ||
23 | AT1G54340 | isocitrate dehydrogenase | isocitrate dehydrogenase | 0.89 | 0.3 | -0.32 | ||
24 | AT5G06870 | polygalacturonase inhibiting protein 2 | ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2, polygalacturonase inhibiting protein 2 |
0.89 | 0.35 | -0.32 | ||
25 | AT5G17860 | calcium exchanger 7 | calcium exchanger 7 | 0.89 | 0.34 | -0.31 | ||
26 | AT3G21790 | UDP-Glycosyltransferase superfamily protein | 0.88 | 0.32 | -0.33 | |||
27 | AT2G01350 | quinolinate phoshoribosyltransferase | quinolinate phoshoribosyltransferase |
0.88 | 0.33 | -0.33 | ||
28 | AT4G37990 | elicitor-activated gene 3-2 | ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELICITOR-ACTIVATED GENE 3, elicitor-activated gene 3-2 |
0.88 | 0.33 | -0.33 | ||
29 | AT2G25910 | 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein |
0.88 | 0.33 | -0.3 | |||
30 | AT5G24430 | Calcium-dependent protein kinase (CDPK) family protein | 0.88 | 0.31 | -0.33 | |||
31 | AT1G63010 | Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein |
0.88 | 0.32 | -0.34 | |||
32 | AT5G16450 | Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase |
0.88 | 0.31 | -0.33 | |||
33 | AT4G29010 | Enoyl-CoA hydratase/isomerase family | ABNORMAL INFLORESCENCE MERISTEM | 0.88 | 0.31 | -0.32 | ||
34 | AT5G38530 | tryptophan synthase beta type 2 | tryptophan synthase beta type 2 | 0.88 | 0.32 | -0.3 | ||
35 | AT5G39050 | HXXXD-type acyl-transferase family protein | phenolic glucoside malonyltransferase 1 |
0.88 | 0.32 | -0.29 | ||
36 | AT5G56760 | serine acetyltransferase 1;1 | serine acetyltransferase 1;1, SERINE ACETYLTRANSFERASE 52, SERINE ACETYLTRANSFERASE 5, serine acetyltransferase 1;1 |
0.88 | 0.32 | -0.34 | ||
37 | AT3G58750 | citrate synthase 2 | citrate synthase 2 | 0.88 | 0.32 | -0.3 | ||
38 | AT4G16760 | acyl-CoA oxidase 1 | acyl-CoA oxidase 1, ATACX1 | 0.87 | 0.3 | -0.31 | ||
39 | AT1G78670 | gamma-glutamyl hydrolase 3 | gamma-glutamyl hydrolase 3, gamma-glutamyl hydrolase 3 |
0.87 | 0.31 | -0.33 | ||
40 | AT5G65380 | MATE efflux family protein | 0.87 | 0.31 | -0.32 | |||
41 | AT1G06180 | myb domain protein 13 | myb domain protein 13, ATMYBLFGN, myb domain protein 13 |
0.87 | 0.32 | -0.32 | ||
42 | AT1G44350 | IAA-leucine resistant (ILR)-like gene 6 | IAA-leucine resistant (ILR)-like gene 6 |
0.87 | 0.32 | -0.28 | ||
43 | AT2G03980 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.87 | 0.31 | -0.33 | |||
44 | AT1G48440 | B-cell receptor-associated 31-like | 0.87 | 0.31 | -0.31 | |||
45 | AT4G36540 | BR enhanced expression 2 | BR enhanced expression 2 | -0.87 | 0.34 | -0.31 | ||
46 | AT3G56310 | Melibiase family protein | 0.87 | 0.31 | -0.34 | |||
47 | AT1G30090 | Galactose oxidase/kelch repeat superfamily protein | 0.87 | 0.32 | -0.32 | |||
48 | AT2G23150 | natural resistance-associated macrophage protein 3 | ATNRAMP3, natural resistance-associated macrophage protein 3 |
0.87 | 0.31 | -0.33 | ||
49 | AT3G55970 | jasmonate-regulated gene 21 | ATJRG21, jasmonate-regulated gene 21 |
0.87 | 0.32 | -0.32 | ||
50 | AT2G37760 | NAD(P)-linked oxidoreductase superfamily protein | Aldo-keto reductase family 4 member C8 |
0.87 | 0.32 | -0.32 | ||
51 | AT4G16980 | arabinogalactan-protein family | -0.86 | 0.31 | -0.29 | |||
52 | AT2G40480 | Plant protein of unknown function (DUF827) | -0.86 | 0.32 | -0.31 | |||
53 | AT5G14590 | Isocitrate/isopropylmalate dehydrogenase family protein | 0.86 | 0.29 | -0.33 | |||
54 | AT5G42810 | inositol-pentakisphosphate 2-kinase 1 | inositol-pentakisphosphate 2-kinase 1, inositol-pentakisphosphate 2-kinase 1 |
0.86 | 0.32 | -0.32 | ||
55 | AT3G16190 | Isochorismatase family protein | 0.86 | 0.32 | -0.3 | |||
56 | AT4G32250 | Protein kinase superfamily protein | 0.86 | 0.31 | -0.31 | |||
57 | AT2G02390 | glutathione S-transferase zeta 1 | glutathione S-transferase zeta 1, GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 |
0.86 | 0.31 | -0.31 | ||
58 | AT1G01710 | Acyl-CoA thioesterase family protein | 0.86 | 0.34 | -0.32 | |||
59 | AT5G05110 | Cystatin/monellin family protein | 0.86 | 0.32 | -0.32 | |||
60 | AT1G17020 | senescence-related gene 1 | SENESCENCE-RELATED GENE 1, senescence-related gene 1 |
0.86 | 0.32 | -0.32 | ||
61 | AT3G46670 | UDP-glucosyl transferase 76E11 | UDP-glucosyl transferase 76E11 | 0.86 | 0.32 | -0.33 | ||
62 | AT4G21580 | oxidoreductase, zinc-binding dehydrogenase family protein | 0.86 | 0.32 | -0.33 | |||
63 | AT5G65280 | GCR2-like 1 | GCR2-like 1 | 0.86 | 0.3 | -0.32 | ||
64 | AT1G52890 | NAC domain containing protein 19 | NAC domain containing protein 19, NAC domain containing protein 19 |
0.86 | 0.32 | -0.32 | ||
65 | AT1G76070 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20310.1); Has 66 Blast hits to 66 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.86 | 0.31 | -0.31 | |||
66 | AT3G22160 | VQ motif-containing protein | 0.86 | 0.32 | -0.31 | |||
67 | AT1G33490 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
0.86 | 0.34 | -0.35 | |||
68 | AT1G10585 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.86 | 0.31 | -0.34 | |||
69 | AT5G27520 | peroxisomal adenine nucleotide carrier 2 | AtPNC2, peroxisomal adenine nucleotide carrier 2 |
0.86 | 0.33 | -0.31 | ||
70 | AT4G29490 | Metallopeptidase M24 family protein | 0.86 | 0.33 | -0.32 | |||
71 | AT1G69930 | glutathione S-transferase TAU 11 | glutathione S-transferase TAU 11, glutathione S-transferase TAU 11 |
0.86 | 0.33 | -0.32 | ||
72 | AT5G51560 | Leucine-rich repeat protein kinase family protein | -0.85 | 0.32 | -0.29 | |||
73 | AT1G76470 | NAD(P)-binding Rossmann-fold superfamily protein | 0.85 | 0.32 | -0.3 | |||
74 | AT1G26930 | Galactose oxidase/kelch repeat superfamily protein | 0.85 | 0.33 | -0.33 | |||
75 | AT1G20560 | acyl activating enzyme 1 | acyl activating enzyme 1 | 0.85 | 0.31 | -0.32 | ||
76 | AT5G13800 | pheophytinase | Co-regulated with NYE1, pheophytinase |
0.85 | 0.33 | -0.32 | ||
77 | AT1G72610 | germin-like protein 1 | A. THALIANA GERMIN-LIKE PROTEIN 1, germin-like protein 1, GERMIN-LIKE PROTEIN 1 |
-0.85 | 0.3 | -0.3 | ||
78 | AT4G30550 | Class I glutamine amidotransferase-like superfamily protein | gamma-glutamyl peptidase 3 | 0.85 | 0.31 | -0.33 | ||
79 | AT2G42790 | citrate synthase 3 | citrate synthase 3 | 0.85 | 0.32 | -0.31 | ||
80 | AT1G09340 | chloroplast RNA binding | chloroplast RNA binding, CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA, heteroglycan-interacting protein 1.3 |
-0.85 | 0.32 | -0.32 | ||
81 | AT1G77370 | Glutaredoxin family protein | 0.85 | 0.29 | -0.33 | |||
82 | AT3G13910 | Protein of unknown function (DUF3511) | 0.85 | 0.31 | -0.33 | |||
83 | AT1G65820 | microsomal glutathione s-transferase, putative | 0.85 | 0.32 | -0.31 | |||
84 | AT2G32660 | receptor like protein 22 | receptor like protein 22, receptor like protein 22 |
0.85 | 0.31 | -0.3 | ||
85 | AT3G17250 | Protein phosphatase 2C family protein | 0.85 | 0.31 | -0.32 | |||
86 | AT2G01490 | phytanoyl-CoA dioxygenase (PhyH) family protein | 0.85 | 0.32 | -0.33 | |||
87 | AT5G51070 | Clp ATPase | CLPD, EARLY RESPONSIVE TO DEHYDRATION 1, SENESCENCE ASSOCIATED GENE 15 |
0.85 | 0.33 | -0.31 | ||
88 | AT2G43510 | trypsin inhibitor protein 1 | trypsin inhibitor protein 1, trypsin inhibitor protein 1 |
0.85 | 0.31 | -0.32 | ||
89 | AT2G29470 | glutathione S-transferase tau 3 | glutathione S-transferase tau 3, GLUTATHIONE S-TRANSFERASE 21, glutathione S-transferase tau 3 |
0.85 | 0.31 | -0.3 | ||
90 | AT1G60420 | DC1 domain-containing protein | 0.85 | 0.31 | -0.33 | |||
91 | AT2G18950 | homogentisate phytyltransferase 1 | HOMOGENTISATE PHYTYLTRANSFERASE, homogentisate phytyltransferase 1, TPT1, VITAMIN E 2 |
0.85 | 0.32 | -0.34 | ||
92 | AT1G35190 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.85 | 0.29 | -0.31 | |||
93 | AT2G29420 | glutathione S-transferase tau 7 | glutathione S-transferase tau 7, GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 |
0.85 | 0.31 | -0.31 | ||
94 | AT3G17810 | pyrimidine 1 | pyrimidine 1 | 0.85 | 0.3 | -0.33 | ||
95 | AT5G66760 | succinate dehydrogenase 1-1 | succinate dehydrogenase 1-1 | 0.85 | 0.33 | -0.32 | ||
96 | AT2G42600 | phosphoenolpyruvate carboxylase 2 | phosphoenolpyruvate carboxylase 2, phosphoenolpyruvate carboxylase 2 |
-0.85 | 0.32 | -0.29 | ||
97 | AT3G48690 | alpha/beta-Hydrolases superfamily protein | ARABIDOPSIS THALIANA CARBOXYESTERASE 12, CXE12 |
0.85 | 0.31 | -0.3 | ||
98 | AT1G27300 | unknown protein; Has 54 Blast hits to 54 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.85 | 0.32 | -0.31 | |||
99 | AT3G06860 | multifunctional protein 2 | MULTIFUNCTIONAL PROTEIN 2, multifunctional protein 2 |
0.84 | 0.31 | -0.31 | ||
100 | AT1G74920 | aldehyde dehydrogenase 10A8 | aldehyde dehydrogenase 10A8 | 0.84 | 0.32 | -0.29 | ||
101 | AT5G16970 | alkenal reductase | alkenal reductase, alkenal reductase |
0.84 | 0.35 | -0.29 | ||
102 | AT5G55120 | galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases |
VITAMIN C DEFECTIVE 5 | 0.84 | 0.35 | -0.31 | ||
103 | AT3G51090 | Protein of unknown function (DUF1640) | 0.84 | 0.33 | -0.3 | |||
104 | AT1G14130 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.84 | 0.32 | -0.33 | |||
105 | AT2G40200 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.84 | 0.3 | -0.31 | |||
106 | AT1G29195 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.84 | 0.3 | -0.31 | |||
107 | AT1G53030 | Cytochrome C oxidase copper chaperone (COX17) | 0.84 | 0.31 | -0.34 | |||
108 | AT5G47760 | 2-phosphoglycolate phosphatase 2 | 2-phosphoglycolate phosphatase 2, ATPK5, PGLP2, 2-phosphoglycolate phosphatase 2 |
0.84 | 0.3 | -0.31 | ||
109 | AT4G13360 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
0.84 | 0.32 | -0.33 | |||
110 | AT3G44720 | arogenate dehydratase 4 | arogenate dehydratase 4 | 0.84 | 0.32 | -0.31 | ||
111 | AT1G10140 | Uncharacterised conserved protein UCP031279 | 0.84 | 0.31 | -0.32 | |||
112 | AT2G29450 | glutathione S-transferase tau 5 | AT103-1A, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5, glutathione S-transferase tau 5 |
0.84 | 0.31 | -0.31 | ||
113 | AT2G47950 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62990.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.84 | 0.33 | -0.32 | |||
114 | AT3G03640 | beta glucosidase 25 | beta glucosidase 25, GLUC | 0.84 | 0.32 | -0.3 | ||
115 | AT1G54030 | GDSL-like Lipase/Acylhydrolase superfamily protein | GOLGI DEFECTS 36, MODIFIED VACUOLE PHENOTYPE 1 |
0.84 | 0.33 | -0.32 | ||
116 | AT4G19640 | Ras-related small GTP-binding family protein | ARA-7, ARA7, ARABIDOPSIS RAB GTPASE HOMOLOG F2B, ATRAB5B, ATRABF2B, RAB GTPASE HOMOLOG F2B, RABF2B |
0.84 | 0.33 | -0.32 | ||
117 | AT1G09970 | Leucine-rich receptor-like protein kinase family protein | LRR XI-23, receptor-like kinase 7 | 0.84 | 0.36 | -0.31 | ||
118 | AT5G35370 | S-locus lectin protein kinase family protein | 0.84 | 0.34 | -0.31 | |||
119 | AT1G32350 | alternative oxidase 1D | alternative oxidase 1D | 0.84 | 0.32 | -0.31 | ||
120 | AT4G21790 | tobamovirus multiplication 1 | ATTOM1, tobamovirus multiplication 1 |
0.84 | 0.32 | -0.32 | ||
121 | AT1G54020 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.84 | 0.3 | -0.3 | |||
122 | AT4G37150 | methyl esterase 9 | ARABIDOPSIS THALIANA METHYL ESTERASE 9, methyl esterase 9 |
0.84 | 0.3 | -0.31 | ||
123 | AT4G23740 | Leucine-rich repeat protein kinase family protein | -0.84 | 0.31 | -0.3 | |||
124 | AT5G40150 | Peroxidase superfamily protein | -0.84 | 0.29 | -0.32 | |||
125 | AT5G05180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.84 | 0.34 | -0.3 | |||
126 | AT3G51450 | Calcium-dependent phosphotriesterase superfamily protein | 0.84 | 0.32 | -0.31 | |||
127 | AT3G58100 | plasmodesmata callose-binding protein 5 | plasmodesmata callose-binding protein 5 |
-0.84 | 0.31 | -0.29 | ||
128 | AT2G18300 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.84 | 0.31 | -0.32 | |||
129 | AT2G33150 | peroxisomal 3-ketoacyl-CoA thiolase 3 | 3-KETOACYL-COA THIOLASE 2, PEROXISOME DEFECTIVE 1, peroxisomal 3-ketoacyl-CoA thiolase 3 |
0.84 | 0.32 | -0.31 | ||
130 | AT1G21880 | lysm domain GPI-anchored protein 1 precursor | lysm domain GPI-anchored protein 1 precursor |
-0.83 | 0.31 | -0.33 | ||
131 | AT5G64770 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 9 | -0.83 | 0.35 | -0.33 | ||
132 | AT5G27290 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.83 | 0.35 | -0.32 | |||
133 | AT1G78430 | ROP interactive partner 2 | ROP interactive partner 2 | -0.83 | 0.32 | -0.33 | ||
134 | AT2G06850 | xyloglucan endotransglucosylase/hydrolase 4 | endoxyloglucan transferase A1, ENDOXYLOGLUCAN TRANSFERASE, xyloglucan endotransglucosylase/hydrolase 4 |
-0.83 | 0.3 | -0.29 | ||
135 | AT1G16520 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). |
-0.83 | 0.32 | -0.32 | |||
136 | AT4G26530 | Aldolase superfamily protein | -0.83 | 0.31 | -0.32 | |||
137 | AT1G17700 | prenylated RAB acceptor 1.F1 | prenylated RAB acceptor 1.F1 | -0.83 | 0.31 | -0.31 | ||
138 | AT5G17310 | UDP-glucose pyrophosphorylase 2 | UDP-GLUCOSE PYROPHOSPHORYLASE 2, UDP-glucose pyrophosphorylase 2 |
-0.83 | 0.3 | -0.33 | ||
139 | AT3G13560 | O-Glycosyl hydrolases family 17 protein | -0.83 | 0.33 | -0.32 | |||
140 | AT3G55800 | sedoheptulose-bisphosphatase | sedoheptulose-bisphosphatase | -0.83 | 0.33 | -0.31 | ||
141 | AT1G55370 | NDH-dependent cyclic electron flow 5 | NDH-dependent cyclic electron flow 5 |
-0.82 | 0.32 | -0.33 | ||
142 | AT3G62390 | TRICHOME BIREFRINGENCE-LIKE 6 | TRICHOME BIREFRINGENCE-LIKE 6 | -0.82 | 0.32 | -0.32 | ||
143 | AT1G16880 | uridylyltransferase-related | ACT domain repeats 11 | -0.82 | 0.34 | -0.33 | ||
144 | AT3G25130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 3885 Blast hits to 2658 proteins in 280 species: Archae - 12; Bacteria - 208; Metazoa - 970; Fungi - 222; Plants - 148; Viruses - 11; Other Eukaryotes - 2314 (source: NCBI BLink). |
-0.82 | 0.31 | -0.3 | |||
145 | AT4G33400 | Vacuolar import/degradation, Vid27-related protein | -0.82 | 0.31 | -0.3 | |||
146 | AT1G32060 | phosphoribulokinase | phosphoribulokinase | -0.82 | 0.3 | -0.33 | ||
147 | AT1G78995 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.82 | 0.33 | -0.32 | |||
148 | AT1G74690 | IQ-domain 31 | IQ-domain 31 | -0.82 | 0.31 | -0.33 | ||
149 | AT5G45820 | CBL-interacting protein kinase 20 | CBL-interacting protein kinase 20, PROTEIN KINASE 18, SNF1-RELATED PROTEIN KINASE 3.6 |
-0.81 | 0.3 | -0.32 | ||
150 | AT3G42660 | transducin family protein / WD-40 repeat family protein | -0.81 | 0.31 | -0.29 | |||
151 | AT1G18250 | Pathogenesis-related thaumatin superfamily protein | ATLP-1 | -0.81 | 0.34 | -0.31 | ||
152 | AT5G41050 | Pollen Ole e 1 allergen and extensin family protein | -0.81 | 0.31 | -0.3 | |||
153 | AT3G54050 | high cyclic electron flow 1 | high cyclic electron flow 1 | -0.81 | 0.3 | -0.33 | ||
154 | AT4G00400 | glycerol-3-phosphate acyltransferase 8 | AtGPAT8, glycerol-3-phosphate acyltransferase 8 |
-0.81 | 0.3 | -0.32 | ||
155 | AT4G38770 | proline-rich protein 4 | ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 4, proline-rich protein 4 |
-0.81 | 0.33 | -0.3 | ||
156 | AT5G09240 | ssDNA-binding transcriptional regulator | -0.81 | 0.31 | -0.32 | |||
157 | AT4G38860 | SAUR-like auxin-responsive protein family | -0.81 | 0.31 | -0.31 | |||
158 | AT5G19530 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
ACAULIS 5 | -0.81 | 0.33 | -0.32 | ||
159 | AT3G02920 | Replication protein A, subunit RPA32 | ATRPA32B, RPA32B | -0.81 | 0.31 | -0.32 | ||
160 | AT3G01410 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.8 | 0.29 | -0.31 | |||
161 | AT1G12900 | glyceraldehyde 3-phosphate dehydrogenase A subunit 2 | glyceraldehyde 3-phosphate dehydrogenase A subunit 2 |
-0.8 | 0.32 | -0.31 | ||
162 | AT3G01440 | PsbQ-like 1 | Photosynthetic NDH subcomplex L 3, PsbQ-like 1, PsbQ-like 2 |
-0.8 | 0.31 | -0.32 | ||
163 | AT1G73090 | unknown protein; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.8 | 0.31 | -0.32 | |||
164 | AT5G48460 | Actin binding Calponin homology (CH) domain-containing protein |
-0.8 | 0.31 | -0.31 | |||
165 | AT1G42970 | glyceraldehyde-3-phosphate dehydrogenase B subunit | glyceraldehyde-3-phosphate dehydrogenase B subunit |
-0.8 | 0.29 | -0.3 | ||
166 | AT3G48720 | HXXXD-type acyl-transferase family protein | DEFICIENT IN CUTIN FERULATE | -0.8 | 0.31 | -0.32 | ||
167 | AT2G39730 | rubisco activase | rubisco activase | -0.8 | 0.3 | -0.31 | ||
168 | AT5G11420 | Protein of unknown function, DUF642 | -0.8 | 0.33 | -0.33 | |||
169 | AT5G15840 | B-box type zinc finger protein with CCT domain | CONSTANS, FG | -0.8 | 0.34 | -0.32 | ||
170 | AT2G21330 | fructose-bisphosphate aldolase 1 | fructose-bisphosphate aldolase 1 | -0.8 | 0.31 | -0.31 | ||
171 | AT5G02120 | one helix protein | one helix protein, PIGMENT DEFECTIVE 335 |
-0.8 | 0.3 | -0.31 | ||
172 | AT3G06770 | Pectin lyase-like superfamily protein | -0.8 | 0.31 | -0.31 | |||
173 | AT2G38810 | histone H2A 8 | histone H2A 8 | -0.8 | 0.31 | -0.3 | ||
174 | AT4G12420 | Cupredoxin superfamily protein | SKU5 | -0.8 | 0.33 | -0.29 | ||
175 | AT2G36230 | Aldolase-type TIM barrel family protein | ALBINO AND PALE GREEN 10, HISN3 | -0.8 | 0.32 | -0.3 | ||
176 | AT1G15980 | NDH-dependent cyclic electron flow 1 | NDH-dependent cyclic electron flow 1, NAD(P)H DEHYDROGENASE SUBUNIT 48, Photosynthetic NDH subcomplex B 1 |
-0.8 | 0.3 | -0.29 | ||
177 | AT5G22940 | FRA8 homolog | FRA8 homolog | -0.8 | 0.31 | -0.34 | ||
178 | AT3G16240 | delta tonoplast integral protein | AQP1, ATTIP2;1, delta tonoplast integral protein, DELTA-TIP1, TIP2;1 |
-0.8 | 0.32 | -0.33 | ||
179 | AT1G75500 | Walls Are Thin 1 | Walls Are Thin 1 | -0.8 | 0.3 | -0.3 | ||
180 | AT3G29280 | unknown protein; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.8 | 0.31 | -0.33 | |||
181 | AT1G52190 | Major facilitator superfamily protein | -0.8 | 0.32 | -0.29 | |||
182 | AT1G13170 | OSBP(oxysterol binding protein)-related protein 1D | OSBP(oxysterol binding protein)-related protein 1D |
-0.79 | 0.31 | -0.31 | ||
183 | AT1G14150 | PsbQ-like 2 | Photosynthetic NDH subcomplex L 2, PsbQ-like 1, PsbQ-like 2 |
-0.79 | 0.31 | -0.31 | ||
184 | AT5G40740 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.79 | 0.31 | -0.33 | |||
185 | AT5G56710 | Ribosomal protein L31e family protein | -0.79 | 0.31 | -0.31 | |||
186 | AT5G11690 | translocase inner membrane subunit 17-3 | ARABIDOPSIS THALIANA TRANSLOCASE INNER MEMBRANE SUBUNIT 17-3, translocase inner membrane subunit 17-3 |
-0.79 | 0.31 | -0.31 | ||
187 | AT3G01480 | cyclophilin 38 | ARABIDOPSIS CYCLOPHILIN 38, cyclophilin 38 |
-0.79 | 0.35 | -0.31 | ||
188 | AT5G66000 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17540.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.79 | 0.28 | -0.31 | |||
189 | AT5G19570 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0546 (InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.79 | 0.31 | -0.32 | |||
190 | AT1G04820 | tubulin alpha-4 chain | TORTIFOLIA 2, tubulin alpha-4 chain |
-0.79 | 0.3 | -0.3 | ||
191 | AT1G01225 | NC domain-containing protein-related | -0.79 | 0.33 | -0.32 | |||
192 | AT5G55520 | CONTAINS InterPro DOMAIN/s: Kinesin-related protein (InterPro:IPR010544); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26660.1); Has 32425 Blast hits to 20462 proteins in 1550 species: Archae - 335; Bacteria - 3392; Metazoa - 16996; Fungi - 2645; Plants - 1561; Viruses - 54; Other Eukaryotes - 7442 (source: NCBI BLink). |
-0.79 | 0.32 | -0.33 | |||
193 | AT3G47070 | LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.79 | 0.3 | -0.35 | |||
194 | AT5G05000 | translocon at the outer envelope membrane of chloroplasts 34 |
ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34, OEP34, translocon at the outer envelope membrane of chloroplasts 34 |
-0.79 | 0.32 | -0.3 | ||
195 | AT3G17840 | receptor-like kinase 902 | receptor-like kinase 902 | -0.78 | 0.32 | -0.31 | ||
196 | AT1G67630 | DNA polymerase alpha 2 | EMBRYO DEFECTIVE 2814, DNA polymerase alpha 2 |
-0.78 | 0.33 | -0.35 | ||
197 | AT2G45470 | FASCICLIN-like arabinogalactan protein 8 | ARABINOGALACTAN PROTEIN 8, FASCICLIN-like arabinogalactan protein 8 |
-0.78 | 0.31 | -0.32 | ||
198 | AT1G18040 | cyclin-dependent kinase D1;3 | CYCLIN-DEPENDENT KINASE D1;3, CAK2AT, cyclin-dependent kinase D1;3 |
-0.78 | 0.33 | -0.31 | ||
199 | AT3G02530 | TCP-1/cpn60 chaperonin family protein | -0.78 | 0.32 | -0.32 | |||
200 | AT1G19950 | HVA22-like protein H (ATHVA22H) | HVA22-like protein H (ATHVA22H) | -0.78 | 0.3 | -0.29 | ||
201 | AT1G54180 | BREVIS RADIX-like 3 | ARABIDOPSIS THALIANA BREVIS RADIX-LIKE 3, BREVIS RADIX-like 3 |
-0.78 | 0.33 | -0.31 | ||
202 | AT2G29550 | tubulin beta-7 chain | tubulin beta-7 chain | -0.78 | 0.33 | -0.3 | ||
203 | AT5G17620 | CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1 (InterPro:IPR010604); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.78 | 0.33 | -0.3 | |||
204 | AT2G11910 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 92883 Blast hits to 31060 proteins in 1576 species: Archae - 765; Bacteria - 32670; Metazoa - 21164; Fungi - 12252; Plants - 4238; Viruses - 1282; Other Eukaryotes - 20512 (source: NCBI BLink). |
-0.78 | 0.31 | -0.31 | |||
205 | AT5G54270 | light-harvesting chlorophyll B-binding protein 3 | light-harvesting chlorophyll B-binding protein 3, LHCB3*1 |
-0.78 | 0.31 | -0.31 | ||
206 | AT3G07200 | RING/U-box superfamily protein | -0.78 | 0.33 | -0.33 | |||
207 | AT2G47920 | Kinase interacting (KIP1-like) family protein | -0.78 | 0.34 | -0.3 | |||
208 | AT4G21280 | photosystem II subunit QA | PHOTOSYSTEM II SUBUNIT Q, PHOTOSYSTEM II SUBUNIT Q-1, photosystem II subunit QA |
-0.78 | 0.3 | -0.32 | ||
209 | AT1G18090 | 5'-3' exonuclease family protein | -0.78 | 0.34 | -0.3 | |||
210 | AT4G38430 | rho guanyl-nucleotide exchange factor 1 | ATROPGEF1, rho guanyl-nucleotide exchange factor 1 |
-0.77 | 0.31 | -0.28 | ||
211 | AT5G62710 | Leucine-rich repeat protein kinase family protein | -0.77 | 0.31 | -0.31 | |||
212 | AT2G25880 | ataurora2 | ataurora2, ataurora2 | -0.77 | 0.34 | -0.31 | ||
213 | AT3G63440 | cytokinin oxidase/dehydrogenase 6 | CYTOKININ OXIDASE 6, ATCKX7, cytokinin oxidase/dehydrogenase 6 |
-0.77 | 0.31 | -0.32 | ||
214 | AT1G18370 | ATP binding microtubule motor family protein | ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, HINKEL, NPK1-ACTIVATING KINESIN 1 |
-0.77 | 0.31 | -0.34 | ||
215 | AT1G23790 | Plant protein of unknown function (DUF936) | -0.77 | 0.32 | -0.3 | |||
216 | AT5G25590 | Protein of unknown function (DUF630 and DUF632) | -0.77 | 0.32 | -0.32 | |||
217 | AT1G17220 | Translation initiation factor 2, small GTP-binding protein | fu-gaeri1 | -0.77 | 0.3 | -0.32 | ||
218 | AT3G03130 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17160.1); Has 7130 Blast hits to 3690 proteins in 504 species: Archae - 22; Bacteria - 2666; Metazoa - 1654; Fungi - 721; Plants - 246; Viruses - 56; Other Eukaryotes - 1765 (source: NCBI BLink). |
-0.77 | 0.32 | -0.31 | |||
219 | AT2G42070 | nudix hydrolase homolog 23 | ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 23, nudix hydrolase homolog 23, nudix hydrolase homolog 23 |
-0.77 | 0.31 | -0.32 | ||
220 | AT2G41820 | Leucine-rich repeat protein kinase family protein | -0.77 | 0.34 | -0.29 | |||
221 | AT2G21540 | SEC14-like 3 | SEC14-LIKE 3, SEC14-like 3 | -0.77 | 0.3 | -0.31 | ||
222 | AT1G53800 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits to 882 proteins in 242 species: Archae - 2; Bacteria - 216; Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other Eukaryotes - 493 (source: NCBI BLink). |
-0.77 | 0.32 | -0.32 | |||
223 | AT1G33440 | Major facilitator superfamily protein | -0.77 | 0.33 | -0.3 | |||
224 | AT2G42110 | unknown protein; Has 27 Blast hits to 27 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.77 | 0.33 | -0.33 | |||
225 | AT5G59870 | histone H2A 6 | histone H2A 6 | -0.77 | 0.32 | -0.33 | ||
226 | AT5G20630 | germin 3 | ARABIDOPSIS THALIANA GERMIN 3, germin 3, GERMIN-LIKE PROTEIN 3, GLP3A, GLP3B |
-0.77 | 0.29 | -0.32 | ||
227 | AT3G53130 | Cytochrome P450 superfamily protein | CYTOCHROME P450 97C1, LUTEIN DEFICIENT 1 |
-0.77 | 0.31 | -0.31 | ||
228 | AT2G10940 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.77 | 0.32 | -0.32 | |||
229 | AT3G20240 | Mitochondrial substrate carrier family protein | -0.77 | 0.31 | -0.31 | |||
230 | AT1G68130 | indeterminate(ID)-domain 14 | indeterminate(ID)-domain 14, indeterminate(ID)-domain 14, IDD14alpha, IDD14beta |
-0.77 | 0.31 | -0.3 | ||
231 | AT3G23700 | Nucleic acid-binding proteins superfamily | -0.77 | 0.31 | -0.31 | |||
232 | AT1G49580 | Calcium-dependent protein kinase (CDPK) family protein | -0.77 | 0.33 | -0.3 | |||
233 | AT1G66250 | O-Glycosyl hydrolases family 17 protein | -0.77 | 0.31 | -0.32 | |||
234 | AT5G49960 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.77 | 0.32 | -0.3 |