AT3G52090 : ATRPB13.6
Query Information
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AGICode AT3G52090
Description DNA-directed RNA polymerase, RBP11-like
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G52090 DNA-directed RNA polymerase, RBP11-like ATRPB13.6, NRPB11, NRPD11, NRPE11 1 0.33 -0.3
2 AT3G06760 Drought-responsive family protein 0.81 0.34 -0.31
3 AT3G03330 NAD(P)-binding Rossmann-fold superfamily protein 0.81 0.31 -0.33
4 AT1G06200 Peptidase S24/S26A/S26B/S26C family protein 0.78 0.31 -0.33
5 AT5G18110 novel cap-binding protein novel cap-binding protein 0.78 0.32 -0.33
6 AT5G54430 Adenine nucleotide alpha hydrolases-like superfamily
protein		 ATPHOS32, PHOS32 0.78 0.3 -0.3
7 AT5G59680 Leucine-rich repeat protein kinase family protein -0.76 0.32 -0.32
8 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C 0.76 0.35 -0.33
9 AT2G42680 multiprotein bridging factor 1A ARABIDOPSIS THALIANA MULTIPROTEIN
BRIDGING FACTOR 1A, multiprotein
bridging factor 1A		 0.76 0.32 -0.32
10 AT2G01710 Chaperone DnaJ-domain superfamily protein 0.75 0.36 -0.31
11 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 0.75 0.31 -0.31
12 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.29 -0.34
13 AT1G76660 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in
60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi -
22; Plants - 125; Viruses - 4; Other Eukaryotes - 139
(source: NCBI BLink).		 0.74 0.33 -0.3
14 AT5G16050 general regulatory factor 5 GF14 UPSILON, general regulatory
factor 5		 0.74 0.33 -0.3
15 AT3G55140 Pectin lyase-like superfamily protein 0.74 0.32 -0.31
16 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 0.74 0.32 -0.33
17 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 0.73 0.31 -0.3
18 AT3G48680 gamma carbonic anhydrase-like 2 AtCAL2, gamma carbonic
anhydrase-like 2		 0.73 0.32 -0.31
19 AT5G27840 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP8 0.73 0.31 -0.32
20 AT4G15955 alpha/beta-Hydrolases superfamily protein 0.73 0.28 -0.33
21 AT1G02130 RAS 5 RAS 5, ARABIDOPSIS RAS 5,
ARABIDOPSIS THALIANA RESPONSIVE TO
ABSCISIC ACID 1B, ARABIDOPSIS
THALIANA RAB D2A, RAS 5, RAB D2A		 0.73 0.34 -0.29
22 AT3G24120 Homeodomain-like superfamily protein 0.72 0.31 -0.32
23 AT4G29530 Pyridoxal phosphate phosphatase-related protein 0.72 0.31 -0.32
24 AT2G30920 coenzyme Q 3 coenzyme Q 3, COQ3, coenzyme Q 3,
embryo defective 3002		 0.72 0.29 -0.31
25 AT5G62910 RING/U-box superfamily protein 0.71 0.33 -0.33
26 AT2G33610 switch subunit 3 switch subunit 3, CHROMATIN
REMODELING COMPLEX SUBUNIT B,
switch subunit 3		 0.71 0.31 -0.31
27 AT3G11100 sequence-specific DNA binding transcription factors 0.71 0.32 -0.31
28 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 0.71 0.31 -0.3
29 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 0.71 0.31 -0.32
30 AT1G17930 Aminotransferase-like, plant mobile domain family protein 0.71 0.32 -0.34
31 AT3G02555 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits
to 130 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.3 -0.31
32 AT4G34138 UDP-glucosyl transferase 73B1 UDP-glucosyl transferase 73B1 0.7 0.33 -0.34
33 AT3G20770 Ethylene insensitive 3 family protein AtEIN3, ETHYLENE-INSENSITIVE3 0.7 0.3 -0.32
34 AT4G29420 F-box/RNI-like superfamily protein 0.7 0.34 -0.34
35 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 -0.7 0.32 -0.3
36 AT5G22030 ubiquitin-specific protease 8 ubiquitin-specific protease 8 -0.7 0.3 -0.33
37 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 0.7 0.28 -0.31
38 AT2G19350 Eukaryotic protein of unknown function (DUF872) 0.69 0.34 -0.33
39 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein -0.69 0.32 -0.3
40 AT5G52870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 5		 0.69 0.31 -0.3
41 AT4G35420 dihydroflavonol 4-reductase-like1 dihydroflavonol 4-reductase-like1,
tetraketide alpha-pyrone reductase
1		 -0.69 0.31 -0.31
42 AT2G46490 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits
to 34 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.31
43 AT4G38780 Pre-mRNA-processing-splicing factor -0.69 0.33 -0.32
44 AT4G38170 FAR1-related sequence 9 FAR1-related sequence 9 -0.69 0.32 -0.33
45 AT3G42530 transposable element gene -0.69 0.33 -0.33
46 AT4G26130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G56980.1); Has 121 Blast hits to 116 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi -
0; Plants - 113; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.68 0.3 -0.32
47 AT4G15290 Cellulose synthase family protein ATCSLB05, CELLULOSE SYNTHASE LIKE
5, CSLB05		 -0.68 0.3 -0.3
48 AT3G17100 sequence-specific DNA binding transcription factors 0.68 0.3 -0.31
49 AT5G63540 Domain of unknown function (DUF1767) ATRMI1, BLAP75, RECQ MEDIATED
INSTABILITY 1		 -0.68 0.31 -0.32
50 AT3G55770 GATA type zinc finger transcription factor family protein WLIM2b 0.68 0.31 -0.31
51 AT4G21110 G10 family protein 0.68 0.31 -0.32
52 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 0.68 0.32 -0.32
53 AT3G04730 indoleacetic acid-induced protein 16 indoleacetic acid-induced protein
16		 0.68 0.31 -0.33
54 AT5G67590 NADH-ubiquinone oxidoreductase-related FROSTBITE1 0.68 0.3 -0.32
55 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 0.68 0.3 -0.32
56 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.67 0.31 -0.34
57 AT2G26210 Ankyrin repeat family protein 0.67 0.3 -0.31
58 AT2G21950 SKP1 interacting partner 6 SKP1 interacting partner 6 0.67 0.29 -0.31
59 AT1G26300 BSD domain-containing protein 0.67 0.33 -0.32
60 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 -0.67 0.31 -0.33
61 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3		 0.67 0.32 -0.33
62 AT5G55290 ATPase, V0 complex, subunit E 0.67 0.32 -0.32
63 AT3G13820 F-box and associated interaction domains-containing protein -0.66 0.34 -0.32
64 AT3G20860 NIMA-related kinase 5 NIMA-related kinase 5,
NIMA-related kinase 5		 -0.66 0.34 -0.33
65 AT3G19320 Leucine-rich repeat (LRR) family protein -0.66 0.31 -0.31
66 AT1G53270 ABC-2 type transporter family protein ATP-binding cassette G10 -0.65 0.31 -0.34
67 AT1G12280 LRR and NB-ARC domains-containing disease resistance
protein		 -0.65 0.31 -0.32
68 AT2G40120 Protein kinase superfamily protein -0.65 0.32 -0.3
69 AT5G04500 glycosyltransferase family protein 47 -0.64 0.31 -0.31
70 AT5G03060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11100.2); Has 14506 Blast
hits to 10808 proteins in 1083 species: Archae - 280;
Bacteria - 2737; Metazoa - 4707; Fungi - 940; Plants - 571;
Viruses - 106; Other Eukaryotes - 5165 (source: NCBI
BLink).		 -0.64 0.3 -0.33
71 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 -0.64 0.3 -0.32
72 AT5G61190 putative endonuclease or glycosyl hydrolase with C2H2-type
zinc finger domain		 -0.63 0.31 -0.32
73 AT5G24230 Lipase class 3-related protein -0.63 0.31 -0.31
74 AT1G61930 Protein of unknown function, DUF584 -0.63 0.31 -0.31
75 AT1G19060 Protein of unknown function (DUF626) -0.63 0.3 -0.34
76 AT4G33790 Jojoba acyl CoA reductase-related male sterility protein ECERIFERUM 4, FATTY ACID REDUCTASE
3, G7		 -0.63 0.31 -0.32
77 AT3G49740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.33 -0.32
78 AT5G57720 AP2/B3-like transcriptional factor family protein -0.63 0.33 -0.31
79 AT1G50180 NB-ARC domain-containing disease resistance protein -0.62 0.33 -0.29
80 AT5G65090 DNAse I-like superfamily protein BRISTLED 1, DEFORMED ROOT HAIRS 4,
MRH3		 -0.61 0.31 -0.32
81 AT3G53550 FBD-like domain family protein -0.61 0.29 -0.31
82 AT1G15460 HCO3- transporter family ARABIDOPSIS THALIANA REQUIRES HIGH
BORON 4, REQUIRES HIGH BORON 4		 -0.61 0.33 -0.31
83 AT2G19420 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.32
84 AT5G20690 Leucine-rich repeat protein kinase family protein -0.61 0.34 -0.32
85 AT4G39930 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.3 -0.31
86 AT4G20200 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.6 0.31 -0.3
87 AT1G52800 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.6 0.32 -0.3
88 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 -0.6 0.3 -0.31
89 AT5G39870 Protein of unknown function (DUF1216) -0.6 0.33 -0.33
90 AT4G11760 low-molecular-weight cysteine-rich 17 low-molecular-weight cysteine-rich
17		 -0.6 0.32 -0.31
91 AT3G60440 Phosphoglycerate mutase family protein -0.6 0.31 -0.34
92 AT5G44010 unknown protein; Has 28 Blast hits to 26 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.32 -0.33
93 AT5G07480 KAR-UP oxidoreductase 1 KAR-UP oxidoreductase 1 -0.6 0.31 -0.32
94 AT5G62400 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.3 -0.3
95 AT2G21480 Malectin/receptor-like protein kinase family protein -0.6 0.33 -0.29
96 AT3G49760 basic leucine-zipper 5 basic leucine-zipper 5, basic
leucine-zipper 5		 -0.59 0.31 -0.3
97 AT1G69100 Eukaryotic aspartyl protease family protein -0.59 0.33 -0.3
98 AT1G56380 Mitochondrial transcription termination factor family
protein		 -0.59 0.35 -0.33
99 AT5G52950 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.33 -0.3
100 AT1G22670 Protease-associated (PA) RING/U-box zinc finger family
protein		 -0.59 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
101 C0265 Vitexin - - - 0.85 0.42 -0.45