AT3G52470 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G52470
Description Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G52470 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 1 0.29 -0.3
2 AT5G60210 ROP interactive partner 5 ROP interactive partner 5 -0.72 0.3 -0.3
3 AT3G01290 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 AtHIR2, hypersensitive induced
reaction 2		 0.67 0.32 -0.3
4 AT1G17760 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS THALIANA CLEAVAGE
STIMULATION FACTOR 77, CSTF77		 -0.67 0.31 -0.31
5 AT5G19310 Homeotic gene regulator -0.67 0.33 -0.31
6 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 0.66 0.31 -0.31
7 AT2G04410 RPM1-interacting protein 4 (RIN4) family protein 0.65 0.33 -0.31
8 AT1G10180 BEST Arabidopsis thaliana protein match is: exocyst complex
component 84B (TAIR:AT5G49830.1); Has 132 Blast hits to 132
proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa -
7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes -
8 (source: NCBI BLink).		 -0.63 0.32 -0.31
9 AT3G54670 Structural maintenance of chromosomes (SMC) family protein ATSMC1, STRUCTURAL MAINTENANCE OF
CHROMOSOMES 1, TITAN8		 -0.62 0.33 -0.31
10 AT3G02910 AIG2-like (avirulence induced gene) family protein 0.62 0.31 -0.31
11 AT4G29340 profilin 4 profilin 4 0.61 0.3 -0.32
12 AT1G75750 GAST1 protein homolog 1 GAST1 protein homolog 1 0.6 0.34 -0.31
13 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 -0.6 0.32 -0.31
14 AT3G13175 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G16400.1); Has 29 Blast hits to 29 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.32
15 AT5G59410 Rab5-interacting family protein 0.58 0.3 -0.33
16 AT1G32930 Galactosyltransferase family protein -0.57 0.3 -0.31
17 AT1G10610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.57 0.31 -0.31
18 AT4G12960 Gamma interferon responsive lysosomal thiol (GILT)
reductase family protein		 AtGILT,
gamma-interferon-responsive
lysosomal thiol reductase		 0.57 0.34 -0.33
19 AT4G03340 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.57 0.3 -0.33
20 AT1G42250 transposable element gene -0.57 0.32 -0.32
21 AT1G57650 ATP binding -0.56 0.33 -0.31
22 AT1G58220 Homeodomain-like superfamily protein -0.56 0.3 -0.33
23 AT4G32910 CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein,
Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.31 -0.33
24 AT3G10390 Flavin containing amine oxidoreductase family protein FLOWERING LOCUS D -0.56 0.32 -0.32
25 AT2G29370 NAD(P)-binding Rossmann-fold superfamily protein 0.56 0.32 -0.31
26 AT1G35200 60S ribosomal protein L4/L1 (RPL4B), pseudogene, similar to
60S ribosomal protein L4 (fragment) GB:P49691 from
(Arabidopsis thaliana); blastp match of 50% identity and
6.3e-17 P-value to SP|Q9XF97|RL4_PRUAR 60S ribosomal
protein L4 (L1). (Apricot) {Prunus armeniaca}		 -0.56 0.3 -0.34
27 AT3G50480 homolog of RPW8 4 homolog of RPW8 4 0.55 0.31 -0.32
28 AT1G26240 Proline-rich extensin-like family protein -0.55 0.32 -0.31
29 AT3G02890 RING/FYVE/PHD zinc finger superfamily protein -0.55 0.32 -0.3
30 AT1G68100 ZIP metal ion transporter family IAA-ALANINE RESISTANT 1 0.54 0.31 -0.31
31 AT1G19380 Protein of unknown function (DUF1195) 0.54 0.31 -0.32
32 AT3G13020 hAT transposon superfamily protein -0.54 0.32 -0.3
33 AT3G48740 Nodulin MtN3 family protein AtSWEET11, SWEET11 0.54 0.32 -0.31
34 AT3G07340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.54 0.31 -0.32
35 AT1G17580 myosin 1 ARABIDOPSIS MYOSIN 1, myosin 1,
MYOSIN XI 1		 -0.54 0.32 -0.32
36 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 -0.54 0.31 -0.3
37 AT1G01340 cyclic nucleotide gated channel 10 ACBK1, cyclic nucleotide gated
channel 10, cyclic nucleotide
gated channel 10		 0.53 0.33 -0.31
38 AT5G61430 NAC domain containing protein 100 NAC domain containing protein 100,
ATNAC5, NAC domain containing
protein 100		 0.53 0.3 -0.32
39 AT1G55390 Cysteine/Histidine-rich C1 domain family protein 0.53 0.33 -0.31
40 AT1G50380 Prolyl oligopeptidase family protein -0.51 0.32 -0.32
41 AT4G25434 nudix hydrolase homolog 10 nudix hydrolase homolog 10, nudix
hydrolase homolog 10		 -0.51 0.31 -0.33
42 AT1G03550 Secretory carrier membrane protein (SCAMP) family protein -0.5 0.29 -0.31
43 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 -0.5 0.31 -0.3
44 AT3G28780 Protein of unknown function (DUF1216) -0.49 0.3 -0.32
45 AT1G66720 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.49 0.32 -0.3
46 AT4G03090 sequence-specific DNA binding;sequence-specific DNA binding
transcription factors		 -0.48 0.3 -0.29
47 AT2G27950 Ring/U-Box superfamily protein -0.48 0.32 -0.32
48 AT4G21730 pseudogene of N-ethylmaleimide sensitive factor (NSF) -0.48 0.31 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
49 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.72 0.45 -0.48 C0210