AGICode | AT3G51690 |
Description | PIF1 helicase |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G51690 | PIF1 helicase | 1 | 0.33 | -0.31 | |||
2 | AT1G66960 | Terpenoid cyclases family protein | LUP5 | -0.66 | 0.33 | -0.33 | ||
3 | AT4G05500 | pseudogene, F-box protein family, AtFBL9/AtFBL23, contains similarity to N7 protein GI:3273101 from (Medicago truncatula); blastp match of 39% identity and 1.6e-34 P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein {Medicago truncatula} |
-0.64 | 0.3 | -0.31 | |||
4 | AT3G25930 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.64 | 0.29 | -0.31 | |||
5 | AT5G45140 | nuclear RNA polymerase C2 | nuclear RNA polymerase C2 | -0.62 | 0.3 | -0.32 | ||
6 | AT4G07740 | Protein of unknown function (DUF3287) | 0.61 | 0.31 | -0.32 | |||
7 | AT1G51830 | Leucine-rich repeat protein kinase family protein | -0.61 | 0.31 | -0.31 | |||
8 | AT5G54230 | myb domain protein 49 | myb domain protein 49, myb domain protein 49 |
-0.59 | 0.34 | -0.29 | ||
9 | AT1G61410 | DNA double-strand break repair and VJ recombination XRCC4 | 0.59 | 0.35 | -0.32 | |||
10 | AT4G00355 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits to 97 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
ATG8-interacting protein 2 | 0.59 | 0.34 | -0.31 | ||
11 | AT2G27370 | Uncharacterised protein family (UPF0497) | Casparian strip membrane domain protein 3 |
-0.59 | 0.33 | -0.31 | ||
12 | AT4G34250 | 3-ketoacyl-CoA synthase 16 | 3-ketoacyl-CoA synthase 16 | 0.59 | 0.3 | -0.31 | ||
13 | AT5G60520 | Late embryogenesis abundant (LEA) protein-related | -0.59 | 0.32 | -0.33 | |||
14 | AT2G04025 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 3 | -0.58 | 0.31 | -0.32 | ||
15 | AT5G56070 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.58 | 0.32 | -0.33 | |||
16 | AT1G33220 | Glycosyl hydrolase superfamily protein | 0.57 | 0.31 | -0.29 | |||
17 | AT1G01190 | cytochrome P450, family 78, subfamily A, polypeptide 8 | cytochrome P450, family 78, subfamily A, polypeptide 8 |
-0.57 | 0.32 | -0.31 | ||
18 | AT3G29660 | transposable element gene | 0.57 | 0.31 | -0.32 | |||
19 | AT3G51360 | Eukaryotic aspartyl protease family protein | -0.56 | 0.31 | -0.32 | |||
20 | AT5G53635 | F-box/RNI-like/FBD-like domains-containing protein | -0.56 | 0.32 | -0.33 | |||
21 | AT1G75940 | Glycosyl hydrolase superfamily protein | ATA27, BETA GLUCOSIDASE 20 | 0.55 | 0.33 | -0.34 | ||
22 | AT2G29100 | glutamate receptor 2.9 | glutamate receptor 2.9, GLUTAMATE RECEPTOR 2.9, glutamate receptor 2.9 |
0.55 | 0.31 | -0.33 | ||
23 | AT3G57960 | Emsy N Terminus (ENT) domain-containing protein | -0.55 | 0.33 | -0.31 | |||
24 | AT3G08880 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01570.1); Has 177 Blast hits to 175 proteins in 60 species: Archae - 4; Bacteria - 33; Metazoa - 18; Fungi - 11; Plants - 59; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). |
0.55 | 0.33 | -0.34 | |||
25 | AT2G13920 | pseudogene, CHP-rich zinc finger protein, putative, contains weak PHD zinc finger motifscontains weak PHD zinc finger motifsDC1 domain, a divergent protein kinase C domain of unknown function. |
0.54 | 0.31 | -0.32 | |||
26 | AT4G24300 | Peptidase C50, separase | 0.54 | 0.31 | -0.31 | |||
27 | AT1G50750 | Plant mobile domain protein family | 0.54 | 0.33 | -0.31 | |||
28 | AT1G72840 | Disease resistance protein (TIR-NBS-LRR class) | -0.53 | 0.3 | -0.3 | |||
29 | AT4G22940 | Protein kinase superfamily protein | -0.53 | 0.3 | -0.32 | |||
30 | AT1G14470 | Pentatricopeptide repeat (PPR) superfamily protein | 0.53 | 0.32 | -0.33 | |||
31 | AT4G15090 | FRS (FAR1 Related Sequences) transcription factor family | FAR-RED IMPAIRED RESPONSE 1 | 0.53 | 0.31 | -0.32 | ||
32 | AT4G36620 | GATA transcription factor 19 | GATA transcription factor 19, hanaba taranu like 2 |
-0.53 | 0.31 | -0.33 | ||
33 | AT4G37780 | myb domain protein 87 | ATMYB87, myb domain protein 87 | 0.53 | 0.31 | -0.32 | ||
34 | AT3G28140 | RNA ligase/cyclic nucleotide phosphodiesterase family protein |
0.52 | 0.3 | -0.32 | |||
35 | AT1G63900 | E3 Ubiquitin ligase family protein | DIAP1-like protein 1 | 0.51 | 0.33 | -0.31 | ||
36 | AT1G67990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
TAPETUM-SPECIFIC METHYLTRANSFERASE 1, TSM1 |
0.51 | 0.3 | -0.33 | ||
37 | AT5G20460 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
0.51 | 0.33 | -0.3 | |||
38 | AT1G73280 | serine carboxypeptidase-like 3 | serine carboxypeptidase-like 3 | -0.51 | 0.31 | -0.3 | ||
39 | AT5G51390 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.51 | 0.32 | -0.32 | |||
40 | AT3G59690 | IQ-domain 13 | IQ-domain 13 | -0.5 | 0.3 | -0.29 | ||
41 | AT5G58460 | cation/H+ exchanger 25 | ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 25, cation/H+ exchanger 25 |
-0.5 | 0.31 | -0.31 | ||
42 | AT3G23270 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
0.5 | 0.32 | -0.32 | |||
43 | AT3G10400 | RNA recognition motif and CCHC-type zinc finger domains containing protein |
U11/U12-31K | 0.5 | 0.33 | -0.3 |