AT3G52030 : -
Query Information
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AGICode AT3G52030
Description F-box family protein with WD40/YVTN repeat doamin
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G52030 F-box family protein with WD40/YVTN repeat doamin 1 0.31 -0.31
2 AT3G02490 Pentatricopeptide repeat (PPR) superfamily protein -0.75 0.33 -0.3
3 AT5G01670 NAD(P)-linked oxidoreductase superfamily protein 0.73 0.3 -0.3
4 AT3G06460 GNS1/SUR4 membrane protein family -0.71 0.32 -0.3
5 AT2G07760 Zinc knuckle (CCHC-type) family protein -0.7 0.32 -0.33
6 AT5G34790 transposable element gene -0.69 0.32 -0.33
7 AT3G19430 late embryogenesis abundant protein-related / LEA
protein-related		 -0.69 0.32 -0.3
8 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).		 0.68 0.3 -0.31
9 AT4G35710 Arabidopsis protein of unknown function (DUF241) 0.68 0.32 -0.3
10 AT4G22130 STRUBBELIG-receptor family 8 STRUBBELIG-receptor family 8 -0.68 0.3 -0.34
11 AT1G70580 alanine-2-oxoglutarate aminotransferase 2 alanine-2-oxoglutarate
aminotransferase 2,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 2		 0.68 0.34 -0.33
12 AT2G34840 Coatomer epsilon subunit 0.67 0.31 -0.31
13 AT5G06440 BEST Arabidopsis thaliana protein match is: Polyketide
cyclase/dehydrase and lipid transport superfamily protein
(TAIR:AT3G11720.3); Has 155 Blast hits to 153 proteins in
39 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi -
6; Plants - 101; Viruses - 0; Other Eukaryotes - 39
(source: NCBI BLink).		 0.67 0.3 -0.31
14 AT1G71450 Integrase-type DNA-binding superfamily protein -0.67 0.3 -0.32
15 AT4G04470 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein PMP22 0.67 0.29 -0.31
16 AT2G27775 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
Tetratricopeptide repeat (TPR)-like superfamily protein
(TAIR:AT2G27800.1); Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.34 -0.32
17 AT4G32320 ascorbate peroxidase 6 ascorbate peroxidase 6 0.67 0.31 -0.33
18 AT5G57040 Lactoylglutathione lyase / glyoxalase I family protein 0.67 0.34 -0.32
19 AT3G19070 Homeodomain-like superfamily protein -0.66 0.33 -0.32
20 AT2G47680 zinc finger (CCCH type) helicase family protein -0.66 0.31 -0.32
21 AT4G30630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits
to 33 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.33 -0.32
22 AT4G31470 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.66 0.33 -0.3
23 AT5G03570 iron regulated 2 ARABIDOPSIS THALIANA
IRON-REGULATED PROTEIN 2,
FERROPORTIN 2, iron regulated 2		 -0.66 0.33 -0.28
24 AT2G21940 shikimate kinase 1 ATSK1, shikimate kinase 1 0.66 0.3 -0.33
25 AT5G14670 ADP-ribosylation factor A1B ADP-ribosylation factor A1B,
ADP-ribosylation factor A1B		 -0.65 0.3 -0.32
26 AT3G43420 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.35 -0.29
27 AT3G06510 Glycosyl hydrolase superfamily protein SENSITIVE TO FREEZING 2, SENSITIVE
TO FREEZING 2		 0.65 0.3 -0.32
28 AT4G05240 Ubiquitin-like superfamily protein -0.65 0.35 -0.31
29 AT1G26460 Tetratricopeptide repeat (TPR)-like superfamily protein -0.65 0.29 -0.29
30 AT1G23210 glycosyl hydrolase 9B6 glycosyl hydrolase 9B6, glycosyl
hydrolase 9B6		 -0.65 0.3 -0.3
31 AT3G45420 Concanavalin A-like lectin protein kinase family protein 0.64 0.31 -0.35
32 AT4G08090 transposable element gene -0.64 0.32 -0.31
33 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 0.64 0.31 -0.33
34 AT3G21360 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.64 0.32 -0.3
35 AT1G14390 Leucine-rich repeat protein kinase family protein -0.64 0.32 -0.31
36 AT1G04560 AWPM-19-like family protein 0.64 0.32 -0.3
37 AT5G05350 PLAC8 family protein 0.63 0.33 -0.31
38 AT5G04970 Plant invertase/pectin methylesterase inhibitor superfamily -0.63 0.33 -0.31
39 AT4G16900 Disease resistance protein (TIR-NBS-LRR class) family 0.63 0.35 -0.31
40 AT2G40310 Pectin lyase-like superfamily protein 0.63 0.34 -0.33
41 AT2G25010 Aminotransferase-like, plant mobile domain family protein 0.63 0.29 -0.31
42 AT4G14850 Pentatricopeptide repeat (PPR) superfamily protein lovastatin insensitive 1, MEF11 -0.62 0.3 -0.33
43 AT1G01140 CBL-interacting protein kinase 9 CBL-interacting protein kinase 9,
PROTEIN KINASE 6, SNF1-RELATED
PROTEIN KINASE 3.12		 0.62 0.33 -0.32
44 AT2G20585 nuclear fusion defective 6 NUCLEAR FUSION DEFECTIVE 6 -0.62 0.32 -0.32
45 AT3G02650 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.32 -0.32
46 AT4G25660 PPPDE putative thiol peptidase family protein 0.61 0.31 -0.29
47 AT3G62360 Carbohydrate-binding-like fold -0.61 0.33 -0.31
48 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.61 0.34 -0.33
49 AT1G05880 RING/U-box superfamily protein ARIADNE 12, ARABIDOPSIS ARIADNE 12 0.61 0.33 -0.33
50 AT4G22360 SWIB complex BAF60b domain-containing protein 0.6 0.32 -0.32
51 AT5G12080 mechanosensitive channel of small conductance-like 10 ATMSL10, mechanosensitive channel
of small conductance-like 10		 -0.6 0.32 -0.32
52 AT5G07150 Leucine-rich repeat protein kinase family protein -0.6 0.3 -0.32
53 AT4G16820 alpha/beta-Hydrolases superfamily protein phospholipase A I beta 2 0.59 0.31 -0.32
54 AT3G21740 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 4 -0.59 0.3 -0.3
55 AT3G08960 ARM repeat superfamily protein -0.59 0.32 -0.32
56 AT3G09690 alpha/beta-Hydrolases superfamily protein -0.59 0.33 -0.3
57 AT1G24540 cytochrome P450, family 86, subfamily C, polypeptide 1 cytochrome P450, family 86,
subfamily C, polypeptide 1		 -0.59 0.3 -0.3
58 AT4G13070 RNA-binding CRS1 / YhbY (CRM) domain protein -0.59 0.29 -0.32
59 AT2G02830 transposable element gene -0.59 0.31 -0.32
60 AT2G03380 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.32 -0.31
61 AT4G18650 transcription factor-related 0.59 0.32 -0.33
62 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.3
63 AT1G12220 Disease resistance protein (CC-NBS-LRR class) family RESISTANT TO P. SYRINGAE 5 -0.59 0.32 -0.3
64 AT1G13940 Plant protein of unknown function (DUF863) -0.58 0.32 -0.31
65 AT3G48710 DEK domain-containing chromatin associated protein 0.58 0.31 -0.33
66 AT1G35900 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.31 -0.31
67 ATMG00470 hypothetical protein ORF122A 0.58 0.31 -0.31
68 AT3G24850 Domain of unknown function (DUF313) -0.58 0.3 -0.33
69 AT2G36920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.3 -0.32
70 AT3G17430 Nucleotide-sugar transporter family protein -0.58 0.31 -0.31
71 AT1G50990 Protein kinase protein with tetratricopeptide repeat domain -0.57 0.3 -0.3
72 AT1G33890 Avirulence induced gene (AIG1) family protein -0.57 0.32 -0.32
73 AT1G24110 Peroxidase superfamily protein -0.57 0.32 -0.31
74 AT4G15350 cytochrome P450, family 705, subfamily A, polypeptide 2 cytochrome P450, family 705,
subfamily A, polypeptide 2		 -0.57 0.31 -0.3
75 AT4G31020 alpha/beta-Hydrolases superfamily protein -0.57 0.33 -0.33
76 AT1G74260 purine biosynthesis 4 purine biosynthesis 4 -0.57 0.3 -0.31
77 AT4G15030 CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site
protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits
to 5700 proteins in 376 species: Archae - 6; Bacteria -
264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses -
76; Other Eukaryotes - 2900 (source: NCBI BLink).		 0.57 0.32 -0.32
78 AT5G11430 SPOC domain / Transcription elongation factor S-II protein -0.57 0.3 -0.31
79 AT5G66815 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.57 0.31 -0.33
80 AT3G01130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: male
gametophyte, pollen tube; EXPRESSED DURING: M germinated
pollen stage; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.32 -0.3
81 AT5G13890 Family of unknown function (DUF716) -0.56 0.32 -0.32
82 AT5G66670 Protein of unknown function (DUF677) 0.56 0.31 -0.31
83 AT1G06140 Pentatricopeptide repeat (PPR) superfamily protein mitochondrial editing factor 3 -0.56 0.31 -0.32
84 AT2G19330 plant intracellular ras group-related LRR 6 plant intracellular ras
group-related LRR 6		 0.56 0.3 -0.33
85 AT3G42240 transposable element gene 0.56 0.31 -0.32
86 AT4G20080 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.56 0.32 -0.33
87 AT4G24490 RAB geranylgeranyl transferase alpha subunit 1 RAB geranylgeranyl transferase
alpha subunit 1, RAB
geranylgeranyl transferase alpha
subunit 1		 -0.56 0.32 -0.33
88 AT4G03750 transposable element gene -0.56 0.3 -0.32
89 AT1G75880 SGNH hydrolase-type esterase superfamily protein 0.56 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
90 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.78 0.43 -0.47 C0033
91 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine -0.73 0.46 -0.46 C0038