AT3G51040 : RTE1-homolog
Query Information
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AGICode AT3G51040
Description RTE1-homolog
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G51040 RTE1-homolog RTE1-homolog 1 0.3 -0.31
2 AT4G14110 COP9 signalosome, subunit CSN8 CONSTITUTIVE PHOTOMORPHOGENIC 9,
COP9 SIGNALOSOME SUBUNIT 8, EMBRYO
DEFECTIVE 143, FUSCA 7		 0.76 0.32 -0.29
3 AT2G42210 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-3, OEP16-3 0.72 0.33 -0.32
4 AT1G23220 Dynein light chain type 1 family protein 0.72 0.32 -0.31
5 AT3G16100 RAB GTPase homolog G3C ATRAB7D, RAB GTPase homolog G3C,
RAB GTPase homolog G3C		 0.69 0.32 -0.32
6 AT2G25780 Protein of unknown function (DUF1677) 0.67 0.32 -0.32
7 AT4G22400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G18320.2); Has 44 Blast hits
to 44 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.33 -0.31
8 AT5G50460 secE/sec61-gamma protein transport protein 0.67 0.33 -0.32
9 AT5G45010 DSS1 homolog on chromosome V DSS1 homolog on chromosome V, DSS1
homolog on chromosome V		 0.66 0.32 -0.32
10 AT5G47310 PPPDE putative thiol peptidase family protein 0.65 0.34 -0.31
11 AT1G79770 Protein of unknown function (DUF1677) 0.65 0.33 -0.32
12 AT4G37670 N-acetyl-l-glutamate synthase 2 N-acetyl-l-glutamate synthase 2 0.65 0.32 -0.32
13 AT3G05710 syntaxin of plants 43 ATSYP43, syntaxin of plants 43 0.64 0.32 -0.31
14 AT3G04460 peroxin-12 ABERRANT PEROXISOME MORPHOLOGY 4,
PEROXIN-12, peroxin-12		 0.63 0.3 -0.3
15 AT2G07440 two-component responsive regulator-related / response
regulator protein-related		 0.63 0.32 -0.34
16 AT5G10980 Histone superfamily protein 0.62 0.32 -0.29
17 AT4G37445 BEST Arabidopsis thaliana protein match is: Calcium-binding
EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.62 0.31 -0.3
18 AT5G12230 MED19A; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 MED19A 0.62 0.34 -0.3
19 AT1G22050 membrane-anchored ubiquitin-fold protein 6 precursor membrane-anchored ubiquitin-fold
protein 6 precursor		 0.61 0.32 -0.3
20 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.61 0.32 -0.33
21 AT1G04985 unknown protein; Has 37 Blast hits to 37 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.3 -0.31
22 AT3G13445 TATA binding protein 1 TATA binding protein 1,
TRANSCRIPTION FACTOR IID-1		 0.6 0.31 -0.3
23 AT1G24450 Ribonuclease III family protein NUCLEAR FUSION DEFECTIVE 2 -0.6 0.31 -0.32
24 AT1G76860 Small nuclear ribonucleoprotein family protein 0.6 0.3 -0.32
25 AT3G57230 AGAMOUS-like 16 AGAMOUS-like 16 0.59 0.32 -0.31
26 AT5G49140 Disease resistance protein (TIR-NBS-LRR class) family 0.59 0.31 -0.33
27 AT5G26140 Putative lysine decarboxylase family protein ATLOG9, LONELY GUY 9 0.59 0.32 -0.34
28 AT1G79430 Homeodomain-like superfamily protein ALTERED PHLOEM DEVELOPMENT, WOODY 0.59 0.32 -0.31
29 AT3G55520 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.57 0.31 -0.32
30 AT2G43550 Scorpion toxin-like knottin superfamily protein 0.57 0.33 -0.31
31 AT1G54650 Methyltransferase family protein 0.57 0.33 -0.31
32 AT5G19270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G03566.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.56 0.31 -0.32
33 AT5G30490 CONTAINS InterPro DOMAIN/s: Craniofacial development
protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast
hits to 324 proteins in 149 species: Archae - 0; Bacteria -
18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0;
Other Eukaryotes - 53 (source: NCBI BLink).		 0.56 0.31 -0.34
34 AT4G20070 allantoate amidohydrolase allantoate amidohydrolase,
allantoate amidohydrolase		 0.56 0.3 -0.32
35 AT1G77140 vacuolar protein sorting 45 ATVPS45, vacuolar protein sorting
45		 0.55 0.29 -0.3
36 AT1G70400 CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976);
BEST Arabidopsis thaliana protein match is: pre-mRNA
processing ribonucleoprotein binding region-containing
protein (TAIR:AT1G60170.1); Has 479 Blast hits to 479
proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa
- 125; Fungi - 138; Plants - 124; Viruses - 0; Other
Eukaryotes - 92 (source: NCBI BLink).		 0.55 0.33 -0.3
37 AT4G39870 TLD-domain containing nucleolar protein 0.55 0.33 -0.31
38 AT1G76510 ARID/BRIGHT DNA-binding domain-containing protein 0.55 0.32 -0.33
39 AT1G52990 thioredoxin family protein -0.53 0.32 -0.34
40 AT4G21620 glycine-rich protein -0.52 0.31 -0.31
41 AT2G44590 DYNAMIN-like 1D DYNAMIN-like 1D, DYNAMIN-like 1D -0.52 0.33 -0.3
42 AT2G41260 glycine-rich protein / late embryogenesis abundant protein
(M17)		 ATM17, M17 -0.52 0.31 -0.32
43 AT4G31960 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.3 -0.29
44 AT2G04760 transposable element gene -0.51 0.31 -0.33
45 AT3G15170 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 54, ATNAC1, CUP-SHAPED
COTYLEDON1		 -0.5 0.3 -0.33
46 AT3G04150 RmlC-like cupins superfamily protein -0.5 0.31 -0.31
47 AT4G15040 Subtilisin-like serine endopeptidase family protein -0.49 0.32 -0.31
48 AT5G55680 glycine-rich protein -0.48 0.32 -0.33
49 AT4G09690 Cysteine/Histidine-rich C1 domain family protein -0.48 0.32 -0.29
50 AT1G31220 Formyl transferase -0.47 0.33 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
51 C0188 Nicotine (-)-Nicotine Nicotine - -0.71 0.45 -0.45 C0188
52 C0230 Rutin - - polyphenol biosynthesis -0.64 0.42 -0.44