AT3G51120 : -
Query Information
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AGICode AT3G51120
Description DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 1 0.32 -0.33
2 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 0.77 0.32 -0.31
3 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.73 0.33 -0.32
4 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain 0.73 0.31 -0.33
5 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.72 0.31 -0.33
6 AT2G04830 Protein of unknown function (DUF295) 0.72 0.29 -0.32
7 AT5G24740 Protein of unknown function (DUF1162) 0.72 0.3 -0.3
8 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 0.71 0.32 -0.33
9 AT3G10810 zinc finger (C3HC4-type RING finger) family protein 0.71 0.32 -0.31
10 AT2G46020 transcription regulatory protein SNF2, putative ARABIDOPSIS THALIANA BRAHMA,
BRAHMA, CHA2, CHROMATIN REMODELING
2		 0.71 0.33 -0.33
11 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.7 0.32 -0.31
12 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.7 0.33 -0.31
13 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.7 0.3 -0.31
14 AT5G01290 mRNA capping enzyme family protein 0.7 0.32 -0.32
15 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.7 0.31 -0.3
16 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein 0.7 0.31 -0.3
17 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 -0.69 0.31 -0.31
18 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 0.69 0.32 -0.32
19 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.68 0.32 -0.31
20 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 0.68 0.3 -0.32
21 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.68 0.3 -0.31
22 AT4G28370 RING/U-box superfamily protein 0.68 0.32 -0.3
23 AT1G75790 SKU5 similar 18 SKU5 similar 18 0.68 0.31 -0.33
24 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.68 0.3 -0.3
25 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 0.68 0.32 -0.31
26 AT5G24320 Transducin/WD40 repeat-like superfamily protein 0.68 0.31 -0.33
27 AT4G02710 Kinase interacting (KIP1-like) family protein 0.68 0.32 -0.32
28 AT4G14600 Target SNARE coiled-coil domain protein -0.67 0.33 -0.3
29 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.67 0.3 -0.33
30 AT1G75600 Histone superfamily protein -0.67 0.31 -0.3
31 AT3G06480 DEAD box RNA helicase family protein 0.67 0.29 -0.3
32 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 0.67 0.31 -0.34
33 AT4G32620 Enhancer of polycomb-like transcription factor protein 0.66 0.33 -0.32
34 AT2G45540 WD-40 repeat family protein / beige-related 0.66 0.32 -0.31
35 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 0.66 0.32 -0.33
36 AT3G63180 TIC-like TICKLE, TIC-like 0.66 0.33 -0.31
37 AT4G16280 RNA binding;abscisic acid binding FCA 0.66 0.31 -0.34
38 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 0.66 0.33 -0.29
39 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 0.66 0.3 -0.31
40 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.65 0.3 -0.32
41 AT4G34500 Protein kinase superfamily protein -0.65 0.33 -0.31
42 AT2G07360 SH3 domain-containing protein 0.65 0.31 -0.31
43 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.65 0.33 -0.3
44 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.65 0.34 -0.32
45 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 0.65 0.31 -0.3
46 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 0.65 0.32 -0.33
47 AT1G13470 Protein of unknown function (DUF1262) -0.64 0.31 -0.33
48 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.64 0.31 -0.31
49 AT5G28280 pseudogene, sterol desaturase domain-containing protein,
CER1-like, A.thaliana, ATCER1L19; blastp match of 55%
identity and 8.9e-22 P-value to
GP|4769012|gb|AAD29719.1|AF143746_1|AF143746 CER1 {Oryza
sativa}		 -0.64 0.32 -0.32
50 AT3G07274 unknown pseudogene 0.64 0.33 -0.32
51 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).		 0.64 0.31 -0.33
52 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 0.64 0.33 -0.29
53 AT5G63135 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.29 -0.31
54 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 0.64 0.31 -0.31
55 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.64 0.33 -0.3
56 AT5G58450 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.3 -0.35
57 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 0.63 0.32 -0.32
58 AT3G23870 Protein of unknown function (DUF803) 0.63 0.33 -0.31
59 AT3G07410 RAB GTPase homolog A5B RAB GTPase homolog A5B, RAB GTPase
homolog A5B		 -0.63 0.31 -0.34
60 AT1G69430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits
to 215 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.32 -0.32
61 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.32 -0.34
62 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.31
63 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.31 -0.31
64 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.32 -0.31
65 AT3G20720 unknown protein; Has 184 Blast hits to 181 proteins in 66
species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi -
0; Plants - 40; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.63 0.32 -0.31
66 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.63 0.32 -0.32
67 AT1G07160 Protein phosphatase 2C family protein 0.63 0.32 -0.33
68 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.3
69 AT3G02890 RING/FYVE/PHD zinc finger superfamily protein 0.63 0.33 -0.32
70 AT5G01400 HEAT repeat-containing protein ENHANCED SILENCING PHENOTYPE 4 0.62 0.31 -0.32
71 AT4G11110 SPA1-related 2 SPA1-related 2 0.62 0.3 -0.33
72 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.62 0.31 -0.32
73 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 -0.62 0.31 -0.29
74 AT3G10650 BEST Arabidopsis thaliana protein match is:
nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast
hits to 31782 proteins in 2093 species: Archae - 202;
Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants -
1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI
BLink).		 AtNUP1, NUP1 0.62 0.33 -0.3
75 AT3G15430 Regulator of chromosome condensation (RCC1) family protein 0.62 0.32 -0.32
76 AT3G54670 Structural maintenance of chromosomes (SMC) family protein ATSMC1, STRUCTURAL MAINTENANCE OF
CHROMOSOMES 1, TITAN8		 0.62 0.31 -0.31
77 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.62 0.32 -0.3
78 AT5G22450 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.62 0.3 -0.33
79 AT1G32490 RNA helicase family protein EMBRYO DEFECTIVE 2733, ENHANCED
SILENCING PHENOTYPE 3		 0.62 0.32 -0.32
80 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7		 0.62 0.33 -0.32
81 AT1G31810 Formin Homology 14 Formin Homology 14 0.62 0.31 -0.33
82 AT5G48120 ARM repeat superfamily protein 0.62 0.33 -0.3
83 AT5G01860 C2H2 and C2HC zinc fingers superfamily protein 0.61 0.32 -0.34
84 AT5G12100 pentatricopeptide (PPR) repeat-containing protein 0.61 0.32 -0.28
85 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 -0.61 0.32 -0.32
86 AT2G43250 unknown protein; Has 32 Blast hits to 32 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.31 -0.32
87 AT4G25720 glutaminyl cyclase ARABIDOPSIS THALIANA GLUTAMINYL
CYCLASE, glutaminyl cyclase,
GLUTAMINYL CYCLOTRANSFERASE		 -0.61 0.31 -0.31
88 AT4G25970 phosphatidylserine decarboxylase 3 phosphatidylserine decarboxylase 3 0.61 0.31 -0.33
89 AT2G29560 cytosolic enolase cytosolic enolase -0.61 0.32 -0.32
90 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 -0.61 0.31 -0.29
91 AT2G42100 Actin-like ATPase superfamily protein -0.61 0.33 -0.31
92 AT4G11050 glycosyl hydrolase 9C3 glycosyl hydrolase 9C3, glycosyl
hydrolase 9C3		 -0.61 0.3 -0.3
93 AT1G63490 transcription factor jumonji (jmjC) domain-containing
protein		 0.6 0.33 -0.31
94 AT1G17070 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 0.6 0.31 -0.33
95 AT1G53590 Calcium-dependent lipid-binding (CaLB domain) family
protein		 NTMC2T6.1, NTMC2TYPE6.1 0.6 0.3 -0.32
96 AT4G13960 F-box/RNI-like superfamily protein -0.6 0.31 -0.32
97 AT5G01280 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.3 -0.3
98 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 0.6 0.3 -0.32
99 AT3G60680 Plant protein of unknown function (DUF641) 0.6 0.31 -0.32
100 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.35 -0.31
101 AT5G44070 phytochelatin synthase 1 (PCS1) ARA8, ARABIDOPSIS THALIANA
PHYTOCHELATIN SYNTHASE 1, CADMIUM
SENSITIVE 1, PHYTOCHELATIN
SYNTHASE 1		 -0.6 0.33 -0.33
102 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.3 -0.31
103 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 -0.59 0.31 -0.33
104 AT5G50410 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.29 -0.32
105 AT3G30440 transposable element gene -0.58 0.3 -0.32
106 AT1G67940 non-intrinsic ABC protein 3 ATP-binding cassette I17,
non-intrinsic ABC protein 3,
AtSTAR1, ARABIDOPSIS THALIANA
NON-INTRINSIC ABC PROTEIN 3,
non-intrinsic ABC protein 3		 -0.58 0.34 -0.31
107 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain -0.58 0.3 -0.3
108 AT3G02950 Tho complex subunit 7/Mft1p AtTHO7, THO7 -0.57 0.33 -0.33
109 AT5G08565 Transcription initiation Spt4-like protein -0.57 0.33 -0.32
110 AT4G39756 Galactose oxidase/kelch repeat superfamily protein -0.56 0.31 -0.33
111 AT5G51840 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.32 -0.33
112 AT3G30330 transposable element gene -0.56 0.35 -0.3
113 AT1G70890 MLP-like protein 43 MLP-like protein 43 -0.56 0.33 -0.31
114 AT3G08890 Protein of unknown function, DUF538 -0.55 0.33 -0.3
115 AT1G21220 transposable element gene -0.55 0.32 -0.32
116 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A		 -0.55 0.32 -0.33
117 AT1G49350 pfkB-like carbohydrate kinase family protein -0.55 0.31 -0.31
118 AT4G23220 cysteine-rich RLK (RECEPTOR-like protein kinase) 14 cysteine-rich RLK (RECEPTOR-like
protein kinase) 14		 -0.55 0.31 -0.34
119 AT4G37770 1-amino-cyclopropane-1-carboxylate synthase 8 1-amino-cyclopropane-1-carboxylate
synthase 8		 -0.55 0.3 -0.32
120 AT1G68330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits
to 147 proteins in 23 species: Archae - 0; Bacteria - 0;
Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.54 0.3 -0.31
121 AT1G33540 serine carboxypeptidase-like 18 serine carboxypeptidase-like 18 -0.54 0.3 -0.33
122 AT1G05740 Eukaryotic protein of unknown function (DUF842) -0.54 0.3 -0.3
123 AT2G44000 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.54 0.3 -0.32
124 AT5G15725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.54 0.3 -0.31
125 AT1G33990 methyl esterase 14 METHYL ESTERASE 14, methyl
esterase 14		 -0.54 0.31 -0.34
126 AT1G71760 unknown protein; Has 92 Blast hits to 92 proteins in 41
species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source:
NCBI BLink).		 -0.54 0.31 -0.3
127 AT4G05250 Ubiquitin-like superfamily protein -0.53 0.31 -0.3
128 AT5G60260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.53 0.31 -0.33