AT3G50480 : homolog of RPW8 4
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G50480
Description homolog of RPW8 4
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G50480 homolog of RPW8 4 homolog of RPW8 4 1 0.31 -0.31
2 AT2G39210 Major facilitator superfamily protein 0.68 0.34 -0.33
3 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F
0.68 0.33 -0.32
4 AT4G18930 RNA ligase/cyclic nucleotide phosphodiesterase family
protein
0.67 0.32 -0.3
5 AT3G54420 homolog of carrot EP3-3 chitinase CHITINASE CLASS IV, homolog of
carrot EP3-3 chitinase, CHIV,
homolog of carrot EP3-3 chitinase
0.66 0.32 -0.3
6 AT1G10180 BEST Arabidopsis thaliana protein match is: exocyst complex
component 84B (TAIR:AT5G49830.1); Has 132 Blast hits to 132
proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa -
7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes -
8 (source: NCBI BLink).
-0.66 0.32 -0.3
7 AT3G50570 hydroxyproline-rich glycoprotein family protein 0.65 0.31 -0.32
8 AT2G23680 Cold acclimation protein WCOR413 family 0.64 0.3 -0.32
9 AT1G24290 AAA-type ATPase family protein -0.64 0.32 -0.3
10 AT5G67110 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
ALCATRAZ -0.63 0.32 -0.29
11 AT3G51860 cation exchanger 3 ATCAX3, ATHCX1, CAX1-LIKE, cation
exchanger 3
0.63 0.32 -0.3
12 AT3G04110 glutamate receptor 1.1 ATGLR1.1, GLUTAMATE RECEPTOR 1,
glutamate receptor 1.1
0.63 0.32 -0.32
13 AT5G11020 Protein kinase superfamily protein -0.62 0.3 -0.3
14 AT4G27480 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein
0.62 0.31 -0.33
15 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23
0.62 0.32 -0.3
16 AT1G65500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.62 0.32 -0.3
17 AT4G32650 potassium channel in Arabidopsis thaliana 3 ARABIDOPSIS THALIANA K+ RECTIFYING
CHANNEL 1, A. thaliana
low-K+-tolerant 1, potassium
channel in Arabidopsis thaliana 3,
KC1
0.61 0.32 -0.31
18 AT2G14610 pathogenesis-related gene 1 PATHOGENESIS-RELATED GENE 1,
PATHOGENESIS-RELATED GENE 1,
pathogenesis-related gene 1
0.61 0.34 -0.31
19 AT5G04390 C2H2-type zinc finger family protein 0.61 0.28 -0.32
20 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.61 0.29 -0.33
21 AT4G00240 phospholipase D beta 2 phospholipase D beta 2 0.6 0.33 -0.31
22 AT5G46050 peptide transporter 3 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 3, peptide transporter
3
0.6 0.31 -0.31
23 AT3G26220 cytochrome P450, family 71, subfamily B, polypeptide 3 cytochrome P450, family 71,
subfamily B, polypeptide 3
0.6 0.32 -0.3
24 AT5G11410 Protein kinase superfamily protein 0.6 0.33 -0.31
25 AT5G60250 zinc finger (C3HC4-type RING finger) family protein 0.6 0.32 -0.3
26 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
0.6 0.28 -0.34
27 AT1G07390 receptor like protein 1 receptor like protein 1, receptor
like protein 1
0.6 0.3 -0.33
28 AT3G47480 Calcium-binding EF-hand family protein 0.6 0.27 -0.3
29 AT2G22830 squalene epoxidase 2 squalene epoxidase 2 -0.59 0.31 -0.31
30 AT4G16670 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region
0.59 0.32 -0.34
31 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.59 0.32 -0.32
32 AT5G25490 Ran BP2/NZF zinc finger-like superfamily protein -0.59 0.32 -0.32
33 AT2G17740 Cysteine/Histidine-rich C1 domain family protein 0.58 0.33 -0.29
34 AT1G01340 cyclic nucleotide gated channel 10 ACBK1, cyclic nucleotide gated
channel 10, cyclic nucleotide
gated channel 10
0.58 0.34 -0.32
35 AT5G12170 CRT (chloroquine-resistance transporter)-like transporter 3 CRT (chloroquine-resistance
transporter)-like transporter 3
0.58 0.31 -0.3
36 AT4G00955 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana
protein match is: Protein kinase superfamily protein
(TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.58 0.28 -0.32
37 AT5G25475 AP2/B3-like transcriptional factor family protein -0.58 0.32 -0.3
38 AT5G53550 YELLOW STRIPE like 3 YELLOW STRIPE LIKE 3, YELLOW
STRIPE like 3
0.58 0.3 -0.32
39 AT4G17660 Protein kinase superfamily protein 0.57 0.29 -0.34
40 AT5G61430 NAC domain containing protein 100 NAC domain containing protein 100,
ATNAC5, NAC domain containing
protein 100
0.57 0.31 -0.3
41 AT5G44820 Nucleotide-diphospho-sugar transferase family protein 0.57 0.3 -0.31
42 AT5G51810 gibberellin 20 oxidase 2 AT2353, ATGA20OX2, gibberellin 20
oxidase 2
-0.57 0.3 -0.32
43 AT4G08850 Leucine-rich repeat receptor-like protein kinase family
protein
0.57 0.31 -0.31
44 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 0.57 0.29 -0.31
45 AT5G50790 Nodulin MtN3 family protein AtSWEET10, SWEET10 0.57 0.32 -0.33
46 AT3G28580 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.56 0.3 -0.3
47 AT1G34180 NAC domain containing protein 16 NAC domain containing protein 16,
NAC domain containing protein 16
0.56 0.31 -0.31
48 AT2G31440 INVOLVED IN: positive regulation of catalytic activity,
protein processing; LOCATED IN: integral to membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Aph-1
(InterPro:IPR009294); Has 268 Blast hits to 262 proteins in
79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi
- 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22
(source: NCBI BLink).
-0.56 0.32 -0.32
49 AT3G60030 squamosa promoter-binding protein-like 12 squamosa promoter-binding
protein-like 12
-0.56 0.31 -0.3
50 AT5G07910 Leucine-rich repeat (LRR) family protein 0.56 0.3 -0.31
51 AT1G12400 Nucleotide excision repair, TFIIH, subunit TTDA 0.55 0.3 -0.35
52 AT5G53030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF688 (InterPro:IPR007789); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
0.55 0.33 -0.33
53 AT5G02010 RHO guanyl-nucleotide exchange factor 7 ATROPGEF7, RHO guanyl-nucleotide
exchange factor 7
-0.55 0.31 -0.32
54 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A
0.55 0.32 -0.3
55 AT3G52470 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family
0.55 0.3 -0.34
56 AT4G35570 high mobility group B5 high mobility group B5, HMGD,
NFD05, NUCLEOSOME/CHROMATIN
ASSEMBLY FACTOR 5
-0.55 0.3 -0.31
57 AT1G20350 translocase inner membrane subunit 17-1 translocase inner membrane subunit
17-1, translocase inner membrane
subunit 17-1
0.55 0.31 -0.3
58 AT1G53310 phosphoenolpyruvate carboxylase 1 ATPEPC1, phosphoenolpyruvate
carboxylase 1,
PEP(PHOSPHOENOLPYRUVATE)
CARBOXYLASE 1, phosphoenolpyruvate
carboxylase 1
0.54 0.31 -0.3
59 AT2G28890 poltergeist like 4 poltergeist like 4 0.54 0.3 -0.32
60 AT1G75760 ER lumen protein retaining receptor family protein 0.53 0.32 -0.28
61 AT1G21240 wall associated kinase 3 wall associated kinase 3 0.53 0.3 -0.33
62 AT2G20610 Tyrosine transaminase family protein ABERRANT LATERAL ROOT FORMATION 1,
HOOKLESS 3, ROOTY, ROOTY 1,
SUPERROOT 1
0.53 0.32 -0.35
63 AT5G27410 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein
-0.53 0.31 -0.3
64 AT4G19420 Pectinacetylesterase family protein 0.53 0.31 -0.3
65 AT4G09150 T-complex protein 11 -0.53 0.29 -0.3
66 AT5G50440 membrin 12 ATMEMB12, membrin 12 0.52 0.33 -0.3
67 AT3G05460 sporozoite surface protein-related 0.52 0.33 -0.32
68 AT5G15920 structural maintenance of chromosomes 5 EMBRYO DEFECTIVE 2782, structural
maintenance of chromosomes 5
-0.52 0.31 -0.32
69 AT1G19610 Arabidopsis defensin-like protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
78, PDF1.4
0.52 0.31 -0.28
70 AT5G23780 DOMAIN OF UNKNOWN FUNCTION 724 9 DOMAIN OF UNKNOWN FUNCTION 724 9,
DOMAIN OF UNKNOWN FUNCTION 724 9
-0.51 0.32 -0.29
71 AT5G45500 RNI-like superfamily protein 0.51 0.31 -0.32
72 AT5G51660 cleavage and polyadenylation specificity factor 160 ATCPSF160, cleavage and
polyadenylation specificity factor
160
-0.5 0.32 -0.33
73 AT1G11790 arogenate dehydratase 1 arogenate dehydratase 1,
Arabidopsis thaliana arogenate
dehydratase 1
-0.5 0.31 -0.31
74 AT2G17620 Cyclin B2;1 Cyclin B2;1 -0.5 0.31 -0.31
75 AT3G32400 Actin-binding FH2/DRF autoregulatory protein -0.5 0.31 -0.32
76 AT4G11920 cell cycle switch protein 52 A2 cell cycle switch protein 52 A2,
FIZZY-RELATED 1
-0.49 0.31 -0.32
77 AT1G50380 Prolyl oligopeptidase family protein -0.49 0.31 -0.31
78 AT5G03270 lysine decarboxylase family protein LONELY GUY 6 -0.49 0.33 -0.31
79 AT5G63950 chromatin remodeling 24 chromatin remodeling 24 -0.48 0.31 -0.33
80 AT1G55180 phospholipase D alpha 4 PLDALPHA4, phospholipase D alpha 4 -0.47 0.31 -0.31
81 AT3G57060 binding -0.46 0.3 -0.32
82 AT1G48870 Transducin/WD40 repeat-like superfamily protein -0.46 0.32 -0.31
83 AT2G34740 Protein phosphatase 2C family protein -0.46 0.31 -0.32
84 AT3G47010 Glycosyl hydrolase family protein -0.46 0.31 -0.28
85 AT1G34540 cytochrome P450, family 94, subfamily D, polypeptide 1 cytochrome P450, family 94,
subfamily D, polypeptide 1
-0.46 0.33 -0.31
86 AT2G46310 cytokinin response factor 5 cytokinin response factor 5 -0.46 0.31 -0.29
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
87 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.82 0.51 -0.48 C0248
88 C0089 Fortunellin - - - -0.82 0.44 -0.42
89 C0019 1-O-β-Glucopyranosylsinapic acid 1-O-β-D-Glucopyranosylsinapic acid - phenylpropanoid pathwayl,
lignin biosynthesis
-0.79 0.44 -0.46
90 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis
-0.78 0.42 -0.44 C0233
91 C0229 Robinin - - flavone biosynthesis -0.78 0.46 -0.42
92 C0024 2-(Anilinomethyl)pyrrolidine (S)-(+)-2-(anilinomethyl)pyrrolidine - - -0.76 0.42 -0.44
93 C0212 PR_MST_2336.8 - - - -0.58 0.42 -0.46