AGICode | AT3G50780 |
Description | BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G50780 | BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
1 | 0.32 | -0.33 | |||
2 | AT3G25670 | Leucine-rich repeat (LRR) family protein | 0.75 | 0.28 | -0.31 | |||
3 | AT1G05180 | NAD(P)-binding Rossmann-fold superfamily protein | AUXIN RESISTANT 1 | -0.74 | 0.33 | -0.32 | ||
4 | AT1G65610 | Six-hairpin glycosidases superfamily protein | ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A2, KORRIGAN 2 |
-0.74 | 0.31 | -0.32 | ||
5 | AT4G16260 | Glycosyl hydrolase superfamily protein | -0.74 | 0.32 | -0.33 | |||
6 | AT2G27740 | Family of unknown function (DUF662) | 0.73 | 0.31 | -0.34 | |||
7 | AT5G07800 | Flavin-binding monooxygenase family protein | 0.73 | 0.34 | -0.35 | |||
8 | AT4G34200 | D-3-phosphoglycerate dehydrogenase | embryo sac development arrest 9 | -0.72 | 0.33 | -0.3 | ||
9 | AT5G66560 | Phototropic-responsive NPH3 family protein | 0.72 | 0.31 | -0.31 | |||
10 | AT5G16060 | Cytochrome c oxidase biogenesis protein Cmc1-like | -0.71 | 0.3 | -0.33 | |||
11 | AT3G01960 | unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.71 | 0.34 | -0.31 | |||
12 | AT2G04850 | Auxin-responsive family protein | 0.71 | 0.31 | -0.31 | |||
13 | AT3G62810 | complex 1 family protein / LVR family protein | -0.71 | 0.33 | -0.3 | |||
14 | AT3G61670 | Protein of unknown function (DUF3133) | 0.71 | 0.31 | -0.34 | |||
15 | AT2G44230 | Plant protein of unknown function (DUF946) | 0.7 | 0.31 | -0.32 | |||
16 | AT1G79390 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.7 | 0.32 | -0.3 | |||
17 | AT3G52920 | Family of unknown function (DUF662) | 0.7 | 0.33 | -0.32 | |||
18 | AT4G26970 | aconitase 2 | aconitase 2 | -0.7 | 0.29 | -0.3 | ||
19 | AT5G56360 | calmodulin-binding protein | PRIORITY IN SWEET LIFE 4 | -0.7 | 0.3 | -0.3 | ||
20 | AT5G47640 | nuclear factor Y, subunit B2 | nuclear factor Y, subunit B2 | 0.7 | 0.33 | -0.31 | ||
21 | AT4G23100 | glutamate-cysteine ligase | ATECS1, CADMIUM SENSITIVE 2, glutamate-cysteine ligase, GSHA, PHYTOALEXIN DEFICIENT 2, ROOT MERISTEMLESS 1 |
-0.7 | 0.32 | -0.31 | ||
22 | AT3G08550 | elongation defective 1 protein / ELD1 protein | ABA INSENSITIVE 8, ELONGATION DEFECTIVE 1, KOBITO |
0.69 | 0.3 | -0.33 | ||
23 | AT3G62160 | HXXXD-type acyl-transferase family protein | 0.69 | 0.31 | -0.3 | |||
24 | AT5G17420 | Cellulose synthase family protein | ATCESA7, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, IRREGULAR XYLEM 3, MURUS 10 |
0.69 | 0.32 | -0.29 | ||
25 | AT5G40530 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.69 | 0.29 | -0.31 | |||
26 | AT1G15120 | Ubiquinol-cytochrome C reductase hinge protein | -0.69 | 0.31 | -0.31 | |||
27 | AT5G13500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.69 | 0.33 | -0.34 | |||
28 | AT5G36880 | acetyl-CoA synthetase | acetyl-CoA synthetase | -0.69 | 0.32 | -0.33 | ||
29 | AT2G17720 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
prolyl 4-hydroxylase 5 | -0.68 | 0.32 | -0.3 | ||
30 | AT3G27190 | uridine kinase-like 2 | uridine kinase-like 2 | -0.68 | 0.31 | -0.3 | ||
31 | AT1G27850 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 9215 Blast hits to 5316 proteins in 473 species: Archae - 6; Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539; Viruses - 143; Other Eukaryotes - 2652 (source: NCBI BLink). |
0.68 | 0.33 | -0.32 | |||
32 | AT1G27435 | unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.32 | -0.3 | |||
33 | AT3G53100 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.67 | 0.33 | -0.3 | |||
34 | AT1G62790 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.67 | 0.33 | -0.3 | |||
35 | AT2G38960 | endoplasmic reticulum oxidoreductins 2 | endoplasmic reticulum oxidoreductins 2, endoplasmic reticulum oxidoreductins 2 |
-0.67 | 0.32 | -0.32 | ||
36 | AT3G15095 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 9762 Blast hits to 6439 proteins in 764 species: Archae - 77; Bacteria - 1339; Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131; Other Eukaryotes - 3849 (source: NCBI BLink). |
high chlorophyll fluorescence 243 | 0.67 | 0.32 | -0.32 | ||
37 | AT4G08770 | Peroxidase superfamily protein | peroxidase 37 | -0.67 | 0.33 | -0.32 | ||
38 | AT3G60390 | homeobox-leucine zipper protein 3 | homeobox-leucine zipper protein 3 | 0.67 | 0.32 | -0.32 | ||
39 | AT1G80230 | Rubredoxin-like superfamily protein | -0.67 | 0.32 | -0.29 | |||
40 | AT1G21310 | extensin 3 | extensin 3, extensin 3, ROOT-SHOOT-HYPOCOTYL DEFECTIVE |
-0.67 | 0.32 | -0.33 | ||
41 | AT5G20400 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.66 | 0.3 | -0.31 | |||
42 | AT2G28870 | unknown protein; Has 34 Blast hits to 34 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.31 | -0.32 | |||
43 | AT5G56590 | O-Glycosyl hydrolases family 17 protein | 0.66 | 0.29 | -0.3 | |||
44 | AT3G10080 | RmlC-like cupins superfamily protein | 0.66 | 0.33 | -0.33 | |||
45 | AT5G24930 | CONSTANS-like 4 | ATCOL4, CONSTANS-like 4 | 0.66 | 0.32 | -0.34 | ||
46 | AT5G20885 | RING/U-box superfamily protein | 0.66 | 0.31 | -0.34 | |||
47 | AT3G22425 | imidazoleglycerol-phosphate dehydratase | HISN5A, imidazoleglycerol-phosphate dehydratase |
0.66 | 0.32 | -0.31 | ||
48 | AT1G61370 | S-locus lectin protein kinase family protein | -0.66 | 0.31 | -0.34 | |||
49 | AT3G45680 | Major facilitator superfamily protein | 0.65 | 0.32 | -0.31 | |||
50 | AT3G48570 | secE/sec61-gamma protein transport protein | -0.65 | 0.3 | -0.29 | |||
51 | AT3G20510 | Transmembrane proteins 14C | -0.65 | 0.32 | -0.32 | |||
52 | AT2G19470 | casein kinase I-like 5 | casein kinase I-like 5 | -0.65 | 0.3 | -0.28 | ||
53 | AT4G00090 | Transducin/WD40 repeat-like superfamily protein | -0.65 | 0.32 | -0.34 | |||
54 | AT3G01720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). |
-0.65 | 0.31 | -0.31 | |||
55 | AT4G26940 | Galactosyltransferase family protein | -0.65 | 0.31 | -0.32 | |||
56 | AT4G08390 | stromal ascorbate peroxidase | stromal ascorbate peroxidase | -0.64 | 0.32 | -0.34 | ||
57 | AT2G44270 | repressor of lrx1 | repressor of lrx1 | -0.64 | 0.32 | -0.31 | ||
58 | AT5G25820 | Exostosin family protein | -0.64 | 0.29 | -0.32 | |||
59 | AT4G22470 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein |
-0.64 | 0.34 | -0.33 | |||
60 | AT1G22160 | Protein of unknown function (DUF581) | 0.64 | 0.32 | -0.32 | |||
61 | AT5G12190 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.64 | 0.32 | -0.32 | |||
62 | AT5G43170 | zinc-finger protein 3 | zinc-finger protein 3, zinc-finger protein 3 |
-0.64 | 0.31 | -0.3 | ||
63 | AT3G20430 | CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). |
-0.64 | 0.3 | -0.33 | |||
64 | AT5G65170 | VQ motif-containing protein | -0.64 | 0.32 | -0.3 | |||
65 | AT3G01680 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
sieve element occlusion b, Sieve-Element-Occlusion-Related 1 |
0.64 | 0.32 | -0.3 | ||
66 | AT4G34510 | 3-ketoacyl-CoA synthase 17 | 3-ketoacyl-CoA synthase 17 | 0.64 | 0.34 | -0.3 | ||
67 | AT1G16830 | Pentatricopeptide repeat (PPR) superfamily protein | -0.63 | 0.31 | -0.31 | |||
68 | AT5G39350 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.63 | 0.33 | -0.32 | |||
69 | AT4G33330 | plant glycogenin-like starch initiation protein 3 | glucuronic acid substitution of xylan 2, plant glycogenin-like starch initiation protein 3 |
0.63 | 0.32 | -0.34 | ||
70 | AT5G61780 | TUDOR-SN protein 2 | Arabidopsis thaliana TUDOR-SN protein 2, TUDOR-SN protein 2, TUDOR-SN protein 2 |
-0.63 | 0.32 | -0.32 | ||
71 | AT1G14300 | ARM repeat superfamily protein | -0.63 | 0.31 | -0.3 | |||
72 | AT5G44390 | FAD-binding Berberine family protein | -0.63 | 0.32 | -0.33 | |||
73 | AT4G18430 | RAB GTPase homolog A1E | RAB GTPase homolog A1E, RAB GTPase homolog A1E |
-0.63 | 0.32 | -0.33 | ||
74 | AT1G01840 | unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.33 | -0.3 | |||
75 | AT5G55050 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.63 | 0.29 | -0.32 | |||
76 | AT5G01210 | HXXXD-type acyl-transferase family protein | -0.62 | 0.29 | -0.31 | |||
77 | AT5G04150 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
BHLH101 | 0.62 | 0.32 | -0.32 | ||
78 | AT3G57280 | Transmembrane proteins 14C | -0.62 | 0.33 | -0.34 | |||
79 | AT3G11490 | rac GTPase activating protein | 0.62 | 0.34 | -0.3 | |||
80 | AT1G16420 | metacaspase 8 | ARABIDOPSIS THALIANA METACASPASE 8, metacaspase 2e, metacaspase 8, metacaspase 2e |
-0.62 | 0.3 | -0.31 | ||
81 | AT3G18230 | Octicosapeptide/Phox/Bem1p family protein | -0.62 | 0.31 | -0.31 | |||
82 | AT1G12820 | auxin signaling F-box 3 | auxin signaling F-box 3 | 0.62 | 0.32 | -0.31 | ||
83 | AT5G12170 | CRT (chloroquine-resistance transporter)-like transporter 3 | CRT (chloroquine-resistance transporter)-like transporter 3 |
-0.62 | 0.34 | -0.36 | ||
84 | AT4G26790 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.62 | 0.32 | -0.33 | |||
85 | AT1G06240 | Protein of unknown function DUF455 | 0.62 | 0.32 | -0.32 | |||
86 | AT1G29160 | Dof-type zinc finger DNA-binding family protein | -0.62 | 0.3 | -0.34 | |||
87 | AT3G04720 | pathogenesis-related 4 | HEVEIN-LIKE, PR-4, pathogenesis-related 4 |
-0.61 | 0.3 | -0.31 | ||
88 | AT5G60020 | laccase 17 | ATLAC17, laccase 17 | 0.61 | 0.3 | -0.29 | ||
89 | AT4G32650 | potassium channel in Arabidopsis thaliana 3 | ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, A. thaliana low-K+-tolerant 1, potassium channel in Arabidopsis thaliana 3, KC1 |
-0.61 | 0.31 | -0.31 | ||
90 | AT4G35290 | glutamate receptor 2 | ATGLR3.2, ATGLUR2, GLUTAMATE RECEPTOR 3.2, glutamate receptor 2 |
0.61 | 0.33 | -0.34 | ||
91 | AT2G16660 | Major facilitator superfamily protein | -0.61 | 0.31 | -0.3 | |||
92 | AT5G35700 | fimbrin-like protein 2 | fimbrin-like protein 2, FIMBRIN5 | -0.61 | 0.3 | -0.3 | ||
93 | AT1G26290 | unknown protein; Has 126 Blast hits to 112 proteins in 36 species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 3; Plants - 14; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). |
0.61 | 0.32 | -0.34 | |||
94 | AT2G37090 | Nucleotide-diphospho-sugar transferases superfamily protein | IRREGULAR XYLEM 9 | 0.61 | 0.32 | -0.33 | ||
95 | AT2G14900 | Gibberellin-regulated family protein | -0.61 | 0.31 | -0.32 | |||
96 | AT2G40940 | ethylene response sensor 1 | ETHYLENE RESPONSE SENSOR, ethylene response sensor 1 |
-0.61 | 0.31 | -0.35 | ||
97 | AT4G11010 | nucleoside diphosphate kinase 3 | nucleoside diphosphate kinase 3 | -0.61 | 0.3 | -0.32 | ||
98 | AT5G04590 | sulfite reductase | sulfite reductase | -0.61 | 0.33 | -0.3 | ||
99 | AT5G44030 | cellulose synthase A4 | cellulose synthase A4, IRREGULAR XYLEM 5, NWS2 |
0.61 | 0.32 | -0.33 | ||
100 | AT1G20850 | xylem cysteine peptidase 2 | xylem cysteine peptidase 2 | 0.61 | 0.32 | -0.31 | ||
101 | AT4G29660 | embryo defective 2752 | EMBRYO DEFECTIVE 2752 | -0.6 | 0.29 | -0.32 | ||
102 | AT1G73180 | Eukaryotic translation initiation factor eIF2A family protein |
-0.6 | 0.3 | -0.32 | |||
103 | AT1G67490 | glucosidase 1 | glucosidase 1, KNOPF | -0.6 | 0.31 | -0.33 | ||
104 | AT5G14880 | Potassium transporter family protein | 0.6 | 0.3 | -0.3 | |||
105 | AT1G20640 | Plant regulator RWP-RK family protein | 0.6 | 0.31 | -0.31 | |||
106 | AT4G35350 | xylem cysteine peptidase 1 | xylem cysteine peptidase 1 | 0.6 | 0.32 | -0.31 | ||
107 | AT1G66810 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.6 | 0.3 | -0.3 | |||
108 | AT1G27190 | Leucine-rich repeat protein kinase family protein | 0.6 | 0.32 | -0.32 | |||
109 | AT4G17000 | unknown protein; Has 2862 Blast hits to 2331 proteins in 349 species: Archae - 6; Bacteria - 408; Metazoa - 833; Fungi - 223; Plants - 134; Viruses - 7; Other Eukaryotes - 1251 (source: NCBI BLink). |
0.6 | 0.3 | -0.31 | |||
110 | AT2G04740 | ankyrin repeat family protein | -0.6 | 0.3 | -0.3 | |||
111 | AT2G31490 | unknown protein; Has 55 Blast hits to 55 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.3 | -0.33 | |||
112 | AT2G44910 | homeobox-leucine zipper protein 4 | ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4, homeobox-leucine zipper protein 4, homeobox-leucine zipper protein 4 |
0.6 | 0.3 | -0.31 | ||
113 | AT2G26120 | glycine-rich protein | -0.6 | 0.32 | -0.32 | |||
114 | AT5G25280 | serine-rich protein-related | 0.6 | 0.31 | -0.33 | |||
115 | AT3G07880 | Immunoglobulin E-set superfamily protein | SUPERCENTIPEDE1 | 0.59 | 0.3 | -0.29 | ||
116 | AT2G28330 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08035.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.31 | -0.34 | |||
117 | AT1G72310 | RING/U-box superfamily protein | ATL3 | 0.59 | 0.31 | -0.32 | ||
118 | AT3G47620 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14, TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 |
0.59 | 0.33 | -0.33 | ||
119 | AT1G15080 | lipid phosphate phosphatase 2 | LIPID PHOSPHATE PHOSPHATASE 2, PHOSPHATIDIC ACID PHOSPHATASE 2, lipid phosphate phosphatase 2 |
0.59 | 0.33 | -0.34 | ||
120 | AT5G60720 | Protein of unknown function, DUF547 | 0.59 | 0.32 | -0.32 | |||
121 | AT5G55910 | D6 protein kinase | D6 protein kinase | 0.59 | 0.32 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
122 | C0167 | MST_1744.8 | - | - | - | 0.81 | 0.46 | -0.43 | ||
123 | C0266 | Xylose | D-Xylose | D-Xylose | xylose degradation I | 0.75 | 0.47 | -0.45 | ||
124 | C0063 | Campesterol | - | Campesterol | brassinosteroid biosynthesis I, brassinosteroid biosynthesis II, plant sterol biosynthesis, brassinosteroid biosynthesis III |
0.72 | 0.44 | -0.44 | ||
125 | C0119 | Indole-3-ylmethyl-glucosinolate | - | indol-3-ylmethyl glucosinolate | indole glucosinolate breakdown (active in intact plant cell), indole glucosinolate breakdown (insect chewing induced), glucosinolate biosynthesis from tryptophan |
-0.63 | 0.46 | -0.41 |