AT3G50250 : -
Query Information
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AGICode AT3G50250
Description unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G50250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 1 0.3 -0.33
2 AT2G37360 ABC-2 type transporter family protein ATP-binding cassette G2 0.78 0.34 -0.31
3 AT4G12350 myb domain protein 42 myb domain protein 42, myb domain
protein 42		 0.73 0.31 -0.31
4 AT3G01490 Protein kinase superfamily protein -0.73 0.28 -0.29
5 AT4G29285 low-molecular-weight cysteine-rich 24 low-molecular-weight cysteine-rich
24		 0.73 0.32 -0.32
6 AT3G42790 alfin-like 3 alfin-like 3 -0.72 0.32 -0.31
7 AT5G04120 Phosphoglycerate mutase family protein 0.72 0.31 -0.28
8 AT3G25040 endoplasmic reticulum retention defective 2B endoplasmic reticulum retention
defective 2B		 -0.7 0.32 -0.31
9 AT2G16210 Transcriptional factor B3 family protein 0.7 0.33 -0.31
10 AT4G20450 Leucine-rich repeat protein kinase family protein -0.69 0.32 -0.3
11 AT3G44770 Protein of unknown function (DUF626) 0.69 0.3 -0.33
12 AT1G66960 Terpenoid cyclases family protein LUP5 0.69 0.31 -0.33
13 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 0.69 0.32 -0.31
14 AT5G09310 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl
protease complex, presenilin enhancer-2 subunit
(InterPro:IPR019379); Has 168 Blast hits to 168 proteins in
71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi
- 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6
(source: NCBI BLink).		 -0.69 0.33 -0.3
15 AT2G02400 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.31 -0.3
16 AT5G67090 Subtilisin-like serine endopeptidase family protein 0.69 0.34 -0.32
17 AT5G12460 Protein of unknown function (DUF604) 0.68 0.3 -0.32
18 AT3G29630 UDP-Glycosyltransferase superfamily protein 0.68 0.33 -0.32
19 AT5G05950 maternal effect embryo arrest 60 maternal effect embryo arrest 60 -0.68 0.3 -0.32
20 AT5G17400 endoplasmic reticulum-adenine nucleotide transporter 1 endoplasmic reticulum-adenine
nucleotide transporter 1		 -0.67 0.33 -0.32
21 AT1G23750 Nucleic acid-binding, OB-fold-like protein -0.67 0.32 -0.33
22 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 0.67 0.32 -0.3
23 AT2G27395 pseudogene of cysteine protease-related 0.67 0.31 -0.3
24 AT4G24650 isopentenyltransferase 4 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 4,
isopentenyltransferase 4		 0.67 0.3 -0.31
25 AT3G46070 C2H2-type zinc finger family protein 0.67 0.31 -0.3
26 AT1G37537 transposable element gene 0.65 0.3 -0.3
27 AT4G28940 Phosphorylase superfamily protein 0.65 0.31 -0.32
28 AT2G16970 Major facilitator superfamily protein maternal effect embryo arrest 15 0.64 0.29 -0.33
29 AT5G44200 CAP-binding protein 20 ATCBP20, CAP-binding protein 20 -0.64 0.3 -0.31
30 AT3G52230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast outer membrane, chloroplast thylakoid membrane,
chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 29
Blast hits to 29 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.31
31 AT2G26870 non-specific phospholipase C2 non-specific phospholipase C2 -0.64 0.32 -0.31
32 AT4G19850 lectin-related ARABIDOPSIS THALIANA PHLOEM
PROTEIN 2-A2, phloem protein 2-A2,
PP2A2		 -0.64 0.33 -0.32
33 AT3G44550 fatty acid reductase 5 fatty acid reductase 5 0.64 0.32 -0.32
34 AT5G59910 Histone superfamily protein HTB4 -0.64 0.32 -0.33
35 AT3G42460 transposable element gene 0.63 0.31 -0.33
36 AT2G36060 MMS ZWEI homologue 3 MMS ZWEI homologue 3, UBIQUITIN E2
VARIANT 1C		 -0.63 0.31 -0.34
37 AT4G32700 helicases;ATP-dependent helicases;nucleic acid binding;ATP
binding;DNA-directed DNA polymerases;DNA binding		 TEBICHI 0.63 0.33 -0.3
38 AT4G32860 unknown protein; Has 46 Blast hits to 46 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.33 -0.31
39 AT2G30620 winged-helix DNA-binding transcription factor family
protein		 -0.63 0.32 -0.31
40 AT4G39110 Malectin/receptor-like protein kinase family protein 0.63 0.31 -0.31
41 AT1G01660 RING/U-box superfamily protein -0.63 0.36 -0.34
42 AT1G24240 Ribosomal protein L19 family protein -0.63 0.3 -0.32
43 AT2G26390 Serine protease inhibitor (SERPIN) family protein 0.63 0.31 -0.31
44 AT5G27670 histone H2A 7 histone H2A 7 -0.63 0.33 -0.31
45 AT5G52340 exocyst subunit exo70 family protein A2 exocyst subunit exo70 family
protein A2, exocyst subunit exo70
family protein A2		 -0.63 0.28 -0.31
46 AT3G46390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G32337.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.63 0.32 -0.29
47 AT1G33060 NAC 014 NAC 014, NAC 014 -0.63 0.31 -0.33
48 AT4G40040 Histone superfamily protein -0.63 0.35 -0.3
49 AT5G11280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.63 0.33 -0.32
50 AT1G22790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast
hits to 67 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.33 -0.32
51 AT5G16310 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 UCH1 -0.63 0.33 -0.29
52 AT4G13390 Proline-rich extensin-like family protein extensin 12 -0.62 0.31 -0.32
53 AT4G20200 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.62 0.32 -0.31
54 AT2G42310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits
to 115 proteins in 48 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.3 -0.32
55 AT3G17590 transcription regulatory protein SNF5, putative (BSH) BUSHY GROWTH, CHE1 -0.62 0.32 -0.32
56 AT4G34580 Sec14p-like phosphatidylinositol transfer family protein CAN OF WORMS1, SHORT ROOT HAIR 1 -0.62 0.32 -0.33
57 AT1G16420 metacaspase 8 ARABIDOPSIS THALIANA METACASPASE
8, metacaspase 2e, metacaspase 8,
metacaspase 2e		 0.62 0.3 -0.31
58 AT2G34180 CBL-interacting protein kinase 13 WPL4-LIKE 2, CBL-interacting
protein kinase 13, SNF1-RELATED
PROTEIN KINASE 3.7, WPL4-LIKE 2		 -0.62 0.32 -0.31
59 AT5G05670 signal recognition particle binding -0.62 0.36 -0.34
60 AT2G43150 Proline-rich extensin-like family protein 0.62 0.28 -0.3
61 AT4G30410 sequence-specific DNA binding transcription factors -0.61 0.32 -0.3
62 AT1G15590 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT1G80400.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.61 0.3 -0.31
63 AT1G06080 delta 9 desaturase 1 delta 9 desaturase 1 -0.61 0.31 -0.31
64 AT5G18650 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.61 0.3 -0.32
65 AT4G05000 Vacuolar protein sorting-associated protein VPS28 family
protein		 vacuolar protein
sorting-associated protein 28
homolog 1, VPS28-2		 -0.61 0.31 -0.31
66 AT5G63135 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.33 -0.32
67 AT5G37370 PRP38 family protein ATSRL1 0.61 0.34 -0.32
68 AT2G47560 RING/U-box superfamily protein -0.61 0.31 -0.33
69 AT4G22700 LOB domain-containing protein 32 LOB domain-containing protein 32 0.61 0.32 -0.32
70 AT2G41350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits
to 188 proteins in 66 species: Archae - 0; Bacteria - 12;
Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 AtAUG1, augmin 1, EMBRYO DEFECTIVE
2819		 -0.6 0.32 -0.31
71 AT5G65960 GTP binding -0.6 0.32 -0.34
72 AT4G25010 Nodulin MtN3 family protein AtSWEET14, SWEET14 0.6 0.32 -0.33
73 AT3G55090 ABC-2 type transporter family protein ATP-binding cassette G16 0.6 0.32 -0.32
74 AT4G00560 NAD(P)-binding Rossmann-fold superfamily protein -0.6 0.34 -0.31
75 AT5G26210 alfin-like 4 alfin-like 4 -0.6 0.32 -0.31
76 AT2G06150 transposable element gene 0.6 0.33 -0.32
77 AT1G21830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF740 (InterPro:IPR008004); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.32 -0.33
78 AT3G07440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits
to 37 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.6 0.32 -0.3
79 AT2G33230 YUCCA 7 YUCCA 7 -0.6 0.31 -0.29
80 AT1G49170 Protein of unknown function (DUF167) -0.6 0.32 -0.3
81 AT1G10230 SKP1-like 18 SKP1-like 18, SKP1-like 18 -0.6 0.3 -0.28
82 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 0.6 0.32 -0.29
83 AT1G72570 Integrase-type DNA-binding superfamily protein -0.6 0.32 -0.31
84 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family 0.6 0.32 -0.33
85 AT5G13790 AGAMOUS-like 15 AGAMOUS-like 15 -0.6 0.32 -0.3
86 AT3G29190 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.6 0.31 -0.31
87 AT2G32560 F-box family protein -0.6 0.29 -0.33
88 AT4G30760 Putative endonuclease or glycosyl hydrolase -0.6 0.29 -0.28
89 AT2G19130 S-locus lectin protein kinase family protein 0.59 0.32 -0.33
90 AT3G30510 transposable element gene -0.59 0.32 -0.32
91 AT5G36990 transposable element gene 0.59 0.29 -0.32
92 AT1G03687 DTW domain-containing protein -0.59 0.33 -0.34
93 AT2G36485 ENTH/VHS family protein -0.59 0.33 -0.32
94 AT5G42600 marneral synthase marneral synthase 0.59 0.3 -0.33
95 AT3G18350 Plant protein of unknown function (DUF639) 0.59 0.32 -0.32
96 AT5G49350 Glycine-rich protein family 0.59 0.3 -0.31
97 AT3G57860 UV-B-insensitive 4-like GIGAS CELL 1, OMISSION OF SECOND
DIVISION, UV-B-insensitive 4-like		 -0.59 0.34 -0.34
98 AT1G11040 HSP40/DnaJ peptide-binding protein -0.59 0.3 -0.31
99 AT1G78940 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.59 0.34 -0.3
100 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 0.59 0.31 -0.32
101 AT4G28720 Flavin-binding monooxygenase family protein YUCCA 8 -0.59 0.3 -0.34
102 AT2G40815 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.59 0.29 -0.31
103 AT1G12630 Integrase-type DNA-binding superfamily protein 0.59 0.31 -0.31
104 AT1G35513 pseudogene of isochorismate synthase-related /
isochorismate mutase-related		 0.59 0.32 -0.31
105 AT5G02150 Fes1C Fes1C -0.58 0.31 -0.34
106 AT2G20100 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.58 0.3 -0.32
107 AT4G01440 nodulin MtN21 /EamA-like transporter family protein 0.58 0.32 -0.29
108 AT3G21470 Pentatricopeptide repeat (PPR-like) superfamily protein -0.58 0.35 -0.31
109 AT3G23030 indole-3-acetic acid inducible 2 indole-3-acetic acid inducible 2 -0.58 0.35 -0.31
110 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.31 -0.34
111 AT4G24950 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.31 -0.3
112 AT1G78150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits
to 146 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.32 -0.31
113 AT4G09360 NB-ARC domain-containing disease resistance protein 0.58 0.32 -0.3
114 AT2G43260 F-box and associated interaction domains-containing protein -0.57 0.33 -0.29
115 AT3G10720 Plant invertase/pectin methylesterase inhibitor superfamily -0.57 0.33 -0.32
116 AT3G46020 RNA-binding (RRM/RBD/RNP motifs) family protein -0.57 0.31 -0.31
117 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A -0.57 0.3 -0.3
118 AT3G22990 ARM repeat superfamily protein LEAF AND FLOWER RELATED -0.57 0.32 -0.32
119 AT5G17070 CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core
regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.57 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
120 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		-0.77 0.45 -0.44 C0228
121 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		0.61 0.48 -0.43 C0027