AT3G50420 : -
Query Information
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AGICode AT3G50420
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein 1 0.33 -0.33
2 AT1G30350 Pectin lyase-like superfamily protein 0.81 0.34 -0.33
3 AT2G37670 Transducin/WD40 repeat-like superfamily protein 0.8 0.32 -0.3
4 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein 0.79 0.3 -0.29
5 AT1G50760 Aminotransferase-like, plant mobile domain family protein 0.76 0.34 -0.33
6 AT2G31100 alpha/beta-Hydrolases superfamily protein 0.75 0.35 -0.31
7 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 0.75 0.31 -0.3
8 AT2G05850 serine carboxypeptidase-like 38 serine carboxypeptidase-like 38 -0.75 0.36 -0.33
9 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family 0.74 0.3 -0.3
10 AT5G49260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.74 0.31 -0.31
11 AT5G01310 APRATAXIN-like APRATAXIN-like 0.73 0.3 -0.32
12 AT5G65510 AINTEGUMENTA-like 7 AINTEGUMENTA-like 7, PLETHORA 7 0.72 0.32 -0.31
13 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.71 0.3 -0.3
14 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 0.71 0.31 -0.31
15 AT2G28680 RmlC-like cupins superfamily protein 0.7 0.3 -0.33
16 AT1G80420 BRCT domain-containing DNA repair protein ATXRCC1 -0.69 0.34 -0.31
17 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.34 -0.33
18 AT5G60090 Protein kinase superfamily protein 0.69 0.34 -0.32
19 AT2G27380 extensin proline-rich 1 extensin proline-rich 1, extensin
proline-rich 1		 0.68 0.31 -0.32
20 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.68 0.31 -0.33
21 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7		 -0.67 0.31 -0.32
22 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 0.67 0.32 -0.32
23 AT5G13380 Auxin-responsive GH3 family protein 0.67 0.32 -0.31
24 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.33 -0.28
25 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.33 -0.32
26 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 0.66 0.32 -0.3
27 AT3G32110 transposable element gene 0.66 0.34 -0.32
28 AT1G35380 transposable element gene -0.66 0.33 -0.31
29 AT1G69330 RING/U-box superfamily protein 0.66 0.3 -0.31
30 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.31 -0.32
31 AT1G46336 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.31 -0.33
32 AT5G11290 Plant protein of unknown function (DUF247) 0.65 0.3 -0.32
33 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.32 -0.33
34 AT3G14400 ubiquitin-specific protease 25 ubiquitin-specific protease 25 0.65 0.3 -0.3
35 AT1G32650 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.65 0.31 -0.32
36 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.65 0.31 -0.32
37 AT4G34320 Protein of unknown function (DUF677) 0.65 0.31 -0.31
38 AT2G46940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits
to 141 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.32
39 AT4G13780 methionine--tRNA ligase, putative / methionyl-tRNA
synthetase, putative / MetRS, putative		 0.65 0.32 -0.31
40 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.65 0.31 -0.31
41 AT2G30090 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.65 0.33 -0.33
42 AT4G03480 Ankyrin repeat family protein -0.65 0.31 -0.31
43 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.64 0.34 -0.31
44 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 0.64 0.33 -0.31
45 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 0.64 0.34 -0.3
46 AT5G02310 proteolysis 6 proteolysis 6 -0.64 0.3 -0.32
47 AT3G59010 pectin methylesterase 61 pectin methylesterase 61 -0.64 0.32 -0.32
48 AT1G77860 Rhomboid-related intramembrane serine protease family
protein		 KOMPEITO 0.64 0.36 -0.31
49 AT2G23480 transposable element gene -0.64 0.32 -0.33
50 AT3G49162 pseudogene of glycoside hydrolase family 28 protein -0.64 0.29 -0.31
51 AT3G30190 transposable element gene 0.64 0.33 -0.31
52 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO 0.63 0.33 -0.31
53 AT2G25340 vesicle-associated membrane protein 712 vesicle-associated membrane
protein 712, VAMP712,
vesicle-associated membrane
protein 712		 -0.63 0.31 -0.31
54 AT4G09140 MUTL-homologue 1 ARABIDOPSIS THALIANA
MUTL-HOMOLOGUE 1, MUTL-homologue 1		 0.63 0.31 -0.31
55 AT2G22180 hydroxyproline-rich glycoprotein family protein -0.63 0.31 -0.29
56 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 0.63 0.32 -0.32
57 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.63 0.31 -0.31
58 AT3G62640 Protein of unknown function (DUF3511) 0.63 0.33 -0.33
59 AT3G32090 WRKY family transcription factor -0.63 0.31 -0.31
60 ATMG01410 open reading frame 204 open reading frame 204 -0.63 0.32 -0.29
61 AT4G08210 Pentatricopeptide repeat (PPR-like) superfamily protein 0.63 0.34 -0.33
62 AT3G16620 translocon outer complex protein 120 ARABIDOPSIS THALIANA TRANSLOCON
OUTER COMPLEX PROTEIN 120,
translocon outer complex protein
120		 0.63 0.3 -0.32
63 ATMG00050 hypothetical protein ORF131 -0.63 0.29 -0.3
64 AT2G14550 pseudogene, putative pre-mRNA splicing factor,
non-consensus splice donor TA at exon 5; blastp match of
67% identity and 1.1e-68 P-value to
GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing
factor 3b, subunit 4, 49kD {Xenopus laevis}		 -0.63 0.31 -0.32
65 AT3G21660 UBX domain-containing protein -0.62 0.29 -0.31
66 AT3G25890 Integrase-type DNA-binding superfamily protein cytokinin response factor 11 0.62 0.32 -0.33
67 AT4G34330 Protein of unknown function (DUF677) 0.62 0.29 -0.32
68 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.3 -0.32
69 AT3G16610 pentatricopeptide (PPR) repeat-containing protein 0.62 0.32 -0.32
70 AT5G14470 GHMP kinase family protein -0.62 0.34 -0.32
71 AT2G29220 Concanavalin A-like lectin protein kinase family protein 0.62 0.32 -0.34
72 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 -0.62 0.32 -0.32
73 AT1G02420 Pentatricopeptide repeat (PPR) superfamily protein 0.62 0.31 -0.33
74 AT3G26870 Plant self-incompatibility protein S1 family 0.62 0.3 -0.34
75 AT2G06840 transposable element gene -0.61 0.31 -0.32
76 AT3G54270 sucrose-6F-phosphate phosphohydrolase family protein 0.61 0.33 -0.33
77 AT4G04120 transposable element gene -0.61 0.34 -0.32
78 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.61 0.31 -0.3
79 AT1G22660 Polynucleotide adenylyltransferase family protein 0.61 0.32 -0.31
80 AT3G30660 transposable element gene 0.61 0.29 -0.33
81 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain -0.61 0.32 -0.33
82 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3		 -0.61 0.31 -0.3
83 AT4G11690 Pentatricopeptide repeat (PPR-like) superfamily protein 0.61 0.33 -0.33
84 AT3G56380 response regulator 17 response regulator 17, response
regulator 17		 0.61 0.32 -0.31
85 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 -0.6 0.33 -0.31
86 AT4G28770 Tetraspanin family protein -0.6 0.33 -0.31
87 AT2G04032 zinc transporter 7 precursor zinc transporter 7 precursor -0.6 0.3 -0.33
88 AT1G20400 Protein of unknown function (DUF1204) -0.6 0.31 -0.3
89 AT5G16500 Protein kinase superfamily protein -0.6 0.31 -0.3
90 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 -0.6 0.31 -0.33
91 AT1G14940 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.6 0.33 -0.31
92 AT3G28280 BEST Arabidopsis thaliana protein match is: F-box family
protein-related (TAIR:AT3G28330.1); Has 103 Blast hits to
100 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.31
93 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.59 0.32 -0.31
94 AT4G03770 transposable element gene -0.59 0.29 -0.34
95 AT4G32630 ArfGap/RecO-like zinc finger domain-containing protein -0.59 0.32 -0.31
96 AT5G44880 transposable element gene -0.59 0.31 -0.33
97 AT3G30846 transposable element gene -0.59 0.3 -0.32
98 AT3G28380 P-glycoprotein 17 ATP-binding cassette B17,
P-glycoprotein 17		 -0.58 0.31 -0.32
99 AT2G36020 HVA22-like protein J HVA22-like protein J -0.58 0.31 -0.3
100 AT5G37980 Zinc-binding dehydrogenase family protein -0.58 0.28 -0.31
101 AT2G22630 AGAMOUS-like 17 AGAMOUS-like 17 -0.58 0.31 -0.33
102 AT3G09980 Family of unknown function (DUF662) -0.57 0.33 -0.34
103 AT4G17690 Peroxidase superfamily protein -0.57 0.31 -0.3
104 AT3G17690 cyclic nucleotide gated channel 19 CYCLIC NUCLEOTIDE-GATED CHANNEL
19, cyclic nucleotide gated
channel 19		 -0.57 0.32 -0.32
105 AT3G14630 cytochrome P450, family 72, subfamily A, polypeptide 9 cytochrome P450, family 72,
subfamily A, polypeptide 9		 -0.57 0.33 -0.33
106 AT5G28860 transposable element gene -0.56 0.3 -0.31
107 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.56 0.33 -0.3
108 AT1G26970 Protein kinase superfamily protein -0.56 0.34 -0.32
109 AT5G01440 BEST Arabidopsis thaliana protein match is: Insulinase
(Peptidase family M16) family protein (TAIR:AT1G06900.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.56 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
110 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		-0.65 0.48 -0.46 C0108
111 C0207 Phosphatidylglycerol-34:5 - - - -0.62 0.46 -0.45