AT3G48960 : -
Query Information
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AGICode AT3G48960
Description Ribosomal protein L13e family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G48960 Ribosomal protein L13e family protein 1 0.3 -0.32
2 AT3G30750 transposable element gene -0.75 0.31 -0.31
3 AT5G51520 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.74 0.32 -0.31
4 AT5G57420 indole-3-acetic acid inducible 33 indole-3-acetic acid inducible 33 0.72 0.33 -0.32
5 AT5G57720 AP2/B3-like transcriptional factor family protein 0.72 0.33 -0.32
6 AT3G25280 Major facilitator superfamily protein 0.71 0.31 -0.3
7 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 -0.7 0.29 -0.33
8 AT4G22130 STRUBBELIG-receptor family 8 STRUBBELIG-receptor family 8 0.69 0.29 -0.33
9 AT2G18820 transposable element gene 0.68 0.34 -0.31
10 AT1G29020 Calcium-binding EF-hand family protein 0.68 0.3 -0.31
11 AT5G41180 leucine-rich repeat transmembrane protein kinase family
protein		 0.67 0.32 -0.33
12 AT5G65170 VQ motif-containing protein 0.67 0.32 -0.31
13 AT1G05570 callose synthase 1 ATGSL06, ATGSL6, callose synthase
1, GSL06, GLUCAN SYNTHASE-LIKE 6		 0.67 0.3 -0.28
14 AT3G42690 transposable element gene 0.66 0.31 -0.31
15 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.31 -0.32
16 AT1G69800 Cystathionine beta-synthase (CBS) protein -0.66 0.32 -0.29
17 AT3G29635 HXXXD-type acyl-transferase family protein 0.66 0.29 -0.32
18 AT2G20880 Integrase-type DNA-binding superfamily protein AtERF53, ERF domain 53 0.65 0.32 -0.33
19 AT4G15350 cytochrome P450, family 705, subfamily A, polypeptide 2 cytochrome P450, family 705,
subfamily A, polypeptide 2		 0.65 0.33 -0.34
20 AT3G06460 GNS1/SUR4 membrane protein family 0.65 0.33 -0.32
21 AT1G36600 transposable element gene 0.65 0.3 -0.29
22 AT5G64110 Peroxidase superfamily protein -0.65 0.3 -0.33
23 AT4G10260 pfkB-like carbohydrate kinase family protein 0.65 0.31 -0.33
24 AT1G12450 SNARE associated Golgi protein family -0.64 0.32 -0.32
25 AT3G55180 alpha/beta-Hydrolases superfamily protein 0.64 0.32 -0.31
26 AT1G17230 Leucine-rich receptor-like protein kinase family protein -0.64 0.34 -0.31
27 AT3G42820 transposable element gene 0.64 0.31 -0.32
28 AT5G43550 F-box associated ubiquitination effector family protein 0.64 0.31 -0.3
29 AT5G64905 elicitor peptide 3 precursor elicitor peptide 3 precursor 0.63 0.33 -0.31
30 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 -0.63 0.31 -0.3
31 AT1G61410 DNA double-strand break repair and VJ recombination XRCC4 -0.63 0.31 -0.33
32 AT5G27680 RECQ helicase SIM RECQ helicase SIM 0.63 0.32 -0.32
33 AT1G65090 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G36100.1); Has 1435 Blast hits
to 1033 proteins in 192 species: Archae - 0; Bacteria - 61;
Metazoa - 511; Fungi - 123; Plants - 100; Viruses - 42;
Other Eukaryotes - 598 (source: NCBI BLink).		 -0.63 0.3 -0.34
34 AT4G24500 hydroxyproline-rich glycoprotein family protein -0.62 0.34 -0.33
35 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 -0.62 0.34 -0.29
36 AT5G61865 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.62 0.31 -0.33
37 AT5G07150 Leucine-rich repeat protein kinase family protein 0.62 0.32 -0.32
38 AT3G60410 Protein of unknown function (DUF1639) -0.62 0.32 -0.3
39 AT5G07480 KAR-UP oxidoreductase 1 KAR-UP oxidoreductase 1 0.62 0.34 -0.31
40 AT2G38570 CONTAINS InterPro DOMAIN/s: PRC-barrel-like
(InterPro:IPR011033); Has 300 Blast hits to 300 proteins in
81 species: Archae - 0; Bacteria - 135; Metazoa - 0; Fungi
- 0; Plants - 37; Viruses - 0; Other Eukaryotes - 128
(source: NCBI BLink).		 -0.62 0.31 -0.3
41 AT5G10860 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 3 -0.62 0.31 -0.32
42 AT3G01570 Oleosin family protein -0.62 0.32 -0.32
43 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.62 0.33 -0.33
44 AT2G41570 transposable element gene -0.62 0.29 -0.31
45 AT4G09540 transposable element gene -0.62 0.29 -0.34
46 AT3G44460 Basic-leucine zipper (bZIP) transcription factor family
protein		 basic leucine zipper transcription
factor 67, DPBF2		 0.61 0.33 -0.31
47 AT1G78720 SecY protein transport family protein 0.61 0.31 -0.31
48 AT3G24810 Cyclin-dependent kinase inhibitor family protein ICK3, kip-related protein 5 0.61 0.33 -0.33
49 AT4G08330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast
hits to 98 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.33 -0.31
50 AT4G07450 transposable element gene -0.61 0.31 -0.32
51 AT3G62020 germin-like protein 10 germin-like protein 10 -0.61 0.33 -0.3
52 AT4G03750 transposable element gene 0.61 0.32 -0.31
53 AT3G42440 transposable element gene 0.61 0.33 -0.32
54 AT1G01410 pumilio 22 pumilio 22, pumilio 22 0.61 0.33 -0.33
55 AT3G53030 ser/arg-rich protein kinase 4 ser/arg-rich protein kinase 4 -0.61 0.32 -0.31
56 AT1G34000 one-helix protein 2 one-helix protein 2 -0.61 0.32 -0.31
57 AT1G50300 TBP-associated factor 15 TBP-associated factor 15 -0.6 0.33 -0.32
58 AT4G31610 Transcriptional factor B3 family protein REPRODUCTIVE MERISTEM 1,
REPRODUCTIVE MERISTEM 1		 0.6 0.32 -0.31
59 AT1G33890 Avirulence induced gene (AIG1) family protein 0.6 0.32 -0.33
60 AT5G48100 Laccase/Diphenol oxidase family protein ATLAC15, LACCASE-LIKE 15,
TRANSPARENT TESTA 10		 0.6 0.32 -0.3
61 AT1G12180 BEST Arabidopsis thaliana protein match is: HSP20-like
chaperones superfamily protein (TAIR:AT5G47600.1); Has 8
Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.3 -0.3
62 AT5G17070 CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core
regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.31 -0.31
63 AT2G32050 Family of unknown function (DUF572) 0.6 0.31 -0.31
64 AT5G54790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.31
65 AT2G32400 glutamate receptor 5 ATGLR3.7, GLUTAMATE RECEPTOR 3.7,
glutamate receptor 5		 0.6 0.32 -0.32
66 AT5G02570 Histone superfamily protein 0.6 0.31 -0.31
67 AT3G09405 Pectinacetylesterase family protein 0.59 0.32 -0.31
68 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.32 -0.31
69 AT2G06150 transposable element gene 0.59 0.32 -0.32
70 AT2G48080 oxidoreductase, 2OG-Fe(II) oxygenase family protein 0.59 0.33 -0.29
71 AT2G24255 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF295 (InterPro:IPR005174); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF295) (TAIR:AT1G64840.1); Has 124 Blast hits to
121 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.3 -0.32
72 AT3G57630 exostosin family protein 0.59 0.3 -0.31
73 AT3G29380 Cyclin-like family protein plant-specific TFIIB-related
protein 2		 -0.59 0.31 -0.32
74 AT5G64890 elicitor peptide 2 precursor elicitor peptide 2 precursor 0.59 0.32 -0.32
75 ATMG01350 hypothetical protein ORF145C 0.59 0.35 -0.3
76 AT1G61400 S-locus lectin protein kinase family protein 0.58 0.32 -0.33
77 AT1G30795 Glycine-rich protein family 0.58 0.29 -0.33
78 AT1G28470 NAC domain containing protein 10 NAC domain containing protein 10,
NAC domain containing protein 10,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 3		 -0.58 0.33 -0.32
79 AT1G48010 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.58 0.31 -0.31
80 AT1G06260 Cysteine proteinases superfamily protein 0.58 0.34 -0.32
81 AT4G21230 cysteine-rich RLK (RECEPTOR-like protein kinase) 27 cysteine-rich RLK (RECEPTOR-like
protein kinase) 27		 0.58 0.33 -0.32
82 AT1G21510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cotyledon; Has
380 Blast hits to 286 proteins in 63 species: Archae - 0;
Bacteria - 6; Metazoa - 254; Fungi - 44; Plants - 13;
Viruses - 5; Other Eukaryotes - 58 (source: NCBI BLink).		 -0.58 0.32 -0.31
83 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 -0.58 0.33 -0.3
84 AT3G47800 Galactose mutarotase-like superfamily protein -0.57 0.32 -0.32
85 AT1G79700 Integrase-type DNA-binding superfamily protein -0.57 0.32 -0.32
86 AT5G26140 Putative lysine decarboxylase family protein ATLOG9, LONELY GUY 9 -0.57 0.29 -0.32
87 AT1G57750 cytochrome P450, family 96, subfamily A, polypeptide 15 cytochrome P450, family 96,
subfamily A, polypeptide 15,
MID-CHAIN ALKANE HYDROXYLASE 1		 -0.57 0.33 -0.31
88 AT5G07930 MEI2 C-terminal RRM only like 2 MEI2 C-terminal RRM only like 2 -0.57 0.32 -0.34
89 AT3G01010 UDP-glucose/GDP-mannose dehydrogenase family protein -0.57 0.3 -0.32
90 AT5G03980 SGNH hydrolase-type esterase superfamily protein -0.57 0.33 -0.31
91 AT1G03390 HXXXD-type acyl-transferase family protein -0.56 0.33 -0.3
92 AT5G10770 Eukaryotic aspartyl protease family protein -0.56 0.31 -0.32
93 AT2G03390 uvrB/uvrC motif-containing protein -0.56 0.31 -0.29
94 AT4G13980 winged-helix DNA-binding transcription factor family
protein		 AT-HSFA5, HEAT SHOCK TRANSCRIPTION
FACTOR A5		 -0.56 0.31 -0.28
95 AT1G36810 transposable element gene -0.56 0.28 -0.31
96 AT2G25900 Zinc finger C-x8-C-x5-C-x3-H type family protein ATCTH, A. THALIANA TANDEM ZINC
FINGER PROTEIN 1		 -0.55 0.3 -0.32
97 AT3G24260 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting
(InterPro:IPR013194); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G28870.1); Has 220 Blast
hits to 218 proteins in 65 species: Archae - 7; Bacteria -
6; Metazoa - 43; Fungi - 2; Plants - 115; Viruses - 0;
Other Eukaryotes - 47 (source: NCBI BLink).		 -0.55 0.32 -0.31
98 AT5G43680 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.55 0.33 -0.3
99 AT3G42240 transposable element gene -0.55 0.3 -0.3
100 AT4G36700 RmlC-like cupins superfamily protein -0.55 0.32 -0.33
101 AT2G44910 homeobox-leucine zipper protein 4 ARABIDOPSIS THALIANA
HOMEOBOX-LEUCINE ZIPPER PROTEIN 4,
homeobox-leucine zipper protein 4,
homeobox-leucine zipper protein 4		 -0.55 0.33 -0.32
102 AT5G42960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, plastid, chloroplast envelope;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.54 0.33 -0.32
103 AT2G18850 SET domain-containing protein -0.54 0.33 -0.31
104 AT5G55350 MBOAT (membrane bound O-acyl transferase) family protein -0.54 0.31 -0.31
105 AT5G52290 shortage in chiasmata 1 SHORTAGE IN CHIASMATA 1 -0.54 0.3 -0.32
106 AT4G37050 PATATIN-like protein 4 phospholipase A IVC, PLA V,
patatin-related phospholipase III
beta, PATATIN-like protein 4		 -0.54 0.32 -0.3
107 AT3G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G05180.1); Has 15699 Blast
hits to 11378 proteins in 1134 species: Archae - 391;
Bacteria - 2054; Metazoa - 6851; Fungi - 1354; Plants -
1096; Viruses - 119; Other Eukaryotes - 3834 (source: NCBI
BLink).		 -0.54 0.32 -0.33
108 AT3G53060 SKP1-like 6 SKP1-like 6, SKP1-like 6 -0.54 0.31 -0.29
109 AT3G19330 Protein of unknown function (DUF677) -0.54 0.3 -0.29