AT3G49080 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G49080
Description Ribosomal protein S5 domain 2-like superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G49080 Ribosomal protein S5 domain 2-like superfamily protein 1 0.3 -0.33
2 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.91 0.27 -0.3
3 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 0.9 0.31 -0.32
4 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.89 0.33 -0.32
5 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.89 0.33 -0.29
6 AT2G37990 ribosome biogenesis regulatory protein (RRS1) family
protein		 0.88 0.32 -0.32
7 AT5G26710 Glutamyl/glutaminyl-tRNA synthetase, class Ic 0.88 0.33 -0.32
8 AT1G18540 Ribosomal protein L6 family protein 0.88 0.33 -0.32
9 AT4G17520 Hyaluronan / mRNA binding family 0.88 0.32 -0.33
10 AT3G57290 eukaryotic translation initiation factor 3E ATEIF3E-1, ATINT6, eukaryotic
translation initiation factor 3E,
INT-6, INT6, TIF3E1		 0.88 0.33 -0.32
11 AT1G29250 Alba DNA/RNA-binding protein 0.88 0.32 -0.31
12 AT2G25210 Ribosomal protein L39 family protein 0.88 0.33 -0.3
13 AT3G51800 metallopeptidase M24 family protein A. THALIANA ERBB-3 BINDING PROTEIN
1, ATG2, ERBB-3 BINDING PROTEIN 1		 0.88 0.32 -0.33
14 AT3G23620 Ribosomal RNA processing Brix domain protein 0.87 0.32 -0.32
15 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.87 0.32 -0.31
16 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.87 0.31 -0.3
17 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.87 0.3 -0.32
18 AT5G56670 Ribosomal protein S30 family protein 0.87 0.32 -0.34
19 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 0.87 0.32 -0.3
20 AT1G28395 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast
hits to 89 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.86 0.32 -0.3
21 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.86 0.32 -0.31
22 AT5G58420 Ribosomal protein S4 (RPS4A) family protein 0.86 0.33 -0.32
23 AT5G47210 Hyaluronan / mRNA binding family 0.86 0.31 -0.34
24 AT5G22440 Ribosomal protein L1p/L10e family 0.86 0.34 -0.31
25 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.86 0.32 -0.34
26 AT5G64140 ribosomal protein S28 ribosomal protein S28 0.86 0.32 -0.31
27 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A 0.86 0.33 -0.31
28 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 0.86 0.31 -0.32
29 AT3G07110 Ribosomal protein L13 family protein 0.86 0.29 -0.31
30 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.86 0.34 -0.31
31 AT2G20450 Ribosomal protein L14 0.86 0.31 -0.33
32 AT3G20050 T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit,
T-complex protein 1 alpha subunit		 0.86 0.32 -0.32
33 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.85 0.35 -0.29
34 AT3G25520 ribosomal protein L5 ribosomal protein L5, OLIGOCELLULA
5, PIGGYBACK3, RIBOSOMAL PROTEIN
L5 A		 0.85 0.32 -0.3
35 AT3G05560 Ribosomal L22e protein family 0.85 0.31 -0.32
36 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.85 0.31 -0.32
37 AT1G67430 Ribosomal protein L22p/L17e family protein 0.85 0.3 -0.31
38 AT3G47370 Ribosomal protein S10p/S20e family protein 0.85 0.31 -0.31
39 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.85 0.32 -0.29
40 AT1G73230 Nascent polypeptide-associated complex NAC 0.85 0.28 -0.31
41 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.85 0.32 -0.29
42 AT4G23620 Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain		 0.85 0.31 -0.33
43 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.85 0.3 -0.3
44 AT3G16780 Ribosomal protein L19e family protein 0.85 0.32 -0.32
45 AT4G10450 Ribosomal protein L6 family 0.85 0.33 -0.32
46 AT2G19750 Ribosomal protein S30 family protein 0.84 0.33 -0.31
47 AT5G09510 Ribosomal protein S19 family protein 0.84 0.31 -0.32
48 AT2G39795 Mitochondrial glycoprotein family protein 0.84 0.34 -0.31
49 AT4G15000 Ribosomal L27e protein family 0.84 0.29 -0.33
50 AT2G19670 protein arginine methyltransferase 1A ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 1A,
protein arginine methyltransferase
1A		 0.84 0.33 -0.32
51 AT4G34555 Ribosomal protein S25 family protein 0.84 0.3 -0.32
52 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.84 0.34 -0.3
53 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 0.84 0.3 -0.3
54 AT5G66410 phosducin-like protein 3 homolog phosducin-like protein 3 homolog 0.84 0.32 -0.31
55 AT3G58700 Ribosomal L5P family protein 0.84 0.31 -0.31
56 AT3G03960 TCP-1/cpn60 chaperonin family protein 0.84 0.31 -0.31
57 AT1G12270 stress-inducible protein, putative Hop1 0.84 0.32 -0.3
58 AT2G41840 Ribosomal protein S5 family protein 0.84 0.33 -0.32
59 AT5G23300 pyrimidine d pyrimidine d 0.84 0.33 -0.32
60 AT1G15740 Leucine-rich repeat family protein -0.83 0.31 -0.32
61 AT1G34130 staurosporin and temperature sensitive 3-like b staurosporin and temperature
sensitive 3-like b		 0.83 0.33 -0.31
62 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 0.83 0.33 -0.32
63 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.83 0.33 -0.3
64 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 -0.83 0.32 -0.34
65 AT1G24510 TCP-1/cpn60 chaperonin family protein 0.83 0.33 -0.31
66 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.83 0.31 -0.29
67 AT4G30800 Nucleic acid-binding, OB-fold-like protein 0.83 0.32 -0.32
68 AT3G09630 Ribosomal protein L4/L1 family 0.83 0.32 -0.33
69 AT2G19740 Ribosomal protein L31e family protein 0.83 0.32 -0.34
70 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.82 0.3 -0.31
71 AT5G41970 Metal-dependent protein hydrolase 0.82 0.31 -0.32
72 AT1G04340 HR-like lesion-inducing protein-related 0.82 0.3 -0.32
73 AT1G56110 homolog of nucleolar protein NOP56 homolog of nucleolar protein NOP56 0.82 0.33 -0.33
74 AT2G45710 Zinc-binding ribosomal protein family protein 0.82 0.33 -0.31
75 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 0.82 0.31 -0.32
76 AT1G17880 basic transcription factor 3 ATBTF3, basic transcription factor
3		 0.82 0.31 -0.31
77 AT1G49600 RNA-binding protein 47A RNA-binding protein 47A,
RNA-binding protein 47A		 0.82 0.31 -0.32
78 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 0.82 0.32 -0.34
79 AT4G20440 small nuclear ribonucleoprotein associated protein B small nuclear ribonucleoprotein
associated protein B		 0.82 0.31 -0.3
80 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 0.82 0.34 -0.34
81 AT1G04170 eukaryotic translation initiation factor 2 gamma subunit eukaryotic translation initiation
factor 2 gamma subunit		 0.82 0.32 -0.32
82 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.82 0.32 -0.32
83 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.81 0.29 -0.31
84 AT2G44860 Ribosomal protein L24e family protein 0.81 0.3 -0.33
85 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 0.81 0.32 -0.32
86 AT1G14320 Ribosomal protein L16p/L10e family protein ribosomal protein L10, ribosomal
protein L10 A, SUPPRESSOR OF
ACAULIS 52		 0.81 0.3 -0.32
87 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 0.81 0.31 -0.3
88 AT1G08360 Ribosomal protein L1p/L10e family 0.81 0.33 -0.32
89 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS 0.81 0.32 -0.31
90 AT3G10610 Ribosomal S17 family protein 0.81 0.31 -0.33
91 AT5G20890 TCP-1/cpn60 chaperonin family protein 0.81 0.32 -0.32
92 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 0.81 0.31 -0.31
93 AT4G33865 Ribosomal protein S14p/S29e family protein 0.81 0.32 -0.3
94 AT4G33250 eukaryotic translation initiation factor 3K ATTIF3K1, eukaryotic translation
initiation factor 3K, TIF3K1		 0.81 0.34 -0.33
95 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B 0.81 0.33 -0.35
96 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.81 0.32 -0.32
97 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein 0.81 0.31 -0.32
98 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.8 0.3 -0.32
99 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.79 0.32 -0.32
100 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.78 0.32 -0.31
101 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 -0.78 0.34 -0.31
102 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.78 0.3 -0.32
103 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.78 0.34 -0.31
104 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 -0.78 0.33 -0.31
105 AT1G32740 SBP (S-ribonuclease binding protein) family protein -0.77 0.3 -0.3
106 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.32 -0.3
107 AT1G42470 Patched family protein -0.77 0.35 -0.31
108 AT3G16940 calmodulin binding;transcription regulators -0.76 0.31 -0.33
109 AT3G24740 Protein of unknown function (DUF1644) -0.76 0.3 -0.32
110 AT1G21000 PLATZ transcription factor family protein -0.75 0.32 -0.31
111 AT1G17145 RING/U-box superfamily protein -0.75 0.31 -0.31
112 AT1G30260 BEST Arabidopsis thaliana protein match is:
Galactosyltransferase family protein (TAIR:AT4G21060.1);
Has 30 Blast hits to 30 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.3 -0.32
113 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 -0.74 0.33 -0.33
114 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.31 -0.32
115 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.74 0.31 -0.31
116 AT1G01240 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 11 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16
species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0;
Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.74 0.32 -0.31
117 AT4G02120 CTP synthase family protein -0.73 0.32 -0.32
118 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.73 0.31 -0.31
119 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.73 0.31 -0.29
120 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.73 0.34 -0.31
121 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.73 0.32 -0.33
122 AT3G26000 Ribonuclease inhibitor -0.73 0.32 -0.33
123 AT1G50410 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.73 0.3 -0.31
124 AT5G01670 NAD(P)-linked oxidoreductase superfamily protein -0.73 0.29 -0.3
125 AT5G10940 transducin family protein / WD-40 repeat family protein ALTERED SEED GERMINATION 2 -0.73 0.35 -0.33
126 AT3G13040 myb-like HTH transcriptional regulator family protein -0.73 0.31 -0.33
127 AT2G42950 Magnesium transporter CorA-like family protein -0.72 0.3 -0.33
128 AT1G48840 Plant protein of unknown function (DUF639) -0.72 0.33 -0.33
129 AT5G47070 Protein kinase superfamily protein -0.72 0.29 -0.29
130 AT1G54160 nuclear factor Y, subunit A5 nuclear factor Y, subunit A5,
NUCLEAR FACTOR Y A5		 -0.72 0.3 -0.31
131 AT2G47770 TSPO(outer membrane tryptophan-rich sensory
protein)-related		 TSPO(outer membrane
tryptophan-rich sensory
protein)-related, TSPO(outer
membrane tryptophan-rich sensory
protein)-related		 -0.72 0.32 -0.33
132 AT4G15475 F-box/RNI-like superfamily protein -0.72 0.31 -0.31
133 AT1G58200 MSCS-like 3 MSCS-like 3 -0.71 0.31 -0.33
134 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 -0.71 0.31 -0.33
135 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.71 0.34 -0.3
136 AT3G56140 Protein of unknown function (DUF399 and DUF3411) -0.71 0.31 -0.31
137 AT5G04760 Duplicated homeodomain-like superfamily protein -0.71 0.31 -0.34
138 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.71 0.32 -0.33
139 AT5G46410 SCP1-like small phosphatase 4 SCP1-like small phosphatase 4 -0.71 0.32 -0.31
140 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.71 0.31 -0.31
141 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.7 0.31 -0.34
142 AT1G17360 BEST Arabidopsis thaliana protein match is:
COP1-interacting protein-related (TAIR:AT1G72410.1); Has
9949 Blast hits to 7480 proteins in 576 species: Archae -
12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants -
444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI
BLink).		 -0.7 0.29 -0.32
143 AT1G78080 related to AP2 4 related to AP2 4, wound induced
dedifferentiation 1		 -0.7 0.31 -0.31
144 AT3G02300 Regulator of chromosome condensation (RCC1) family protein -0.69 0.33 -0.31
145 AT1G70590 F-box family protein -0.68 0.3 -0.32
146 AT4G01280 Homeodomain-like superfamily protein -0.68 0.32 -0.29
147 AT3G07870 F-box and associated interaction domains-containing protein -0.68 0.32 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
148 C0217 Putative glucosinole - - - 0.86 0.46 -0.46
149 C0167 MST_1744.8 - - - -0.81 0.47 -0.46
150 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis -0.78 0.44 -0.47 C0003