AT3G49100 : -
Query Information
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AGICode AT3G49100
Description Signal recognition particle, SRP9/SRP14 subunit
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G49100 Signal recognition particle, SRP9/SRP14 subunit 1 0.3 -0.31
2 AT1G14810 semialdehyde dehydrogenase family protein 0.86 0.32 -0.32
3 AT1G14980 chaperonin 10 chaperonin 10 0.86 0.31 -0.3
4 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.85 0.3 -0.3
5 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.85 0.31 -0.33
6 AT3G47370 Ribosomal protein S10p/S20e family protein 0.85 0.29 -0.29
7 AT2G39390 Ribosomal L29 family protein 0.85 0.32 -0.35
8 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.85 0.3 -0.3
9 AT5G47700 60S acidic ribosomal protein family 0.84 0.31 -0.3
10 AT5G42970 Proteasome component (PCI) domain protein ATS4, CONSTITUTIVE
PHOTOMORPHOGENIC 14, CONSTITUTIVE
PHOTOMORPHOGENIC 8, COP9
SIGNALOSOME SUBUNIT 4, EMBRYO
DEFECTIVE 134, FUSCA 4, FUSCA 8		 0.84 0.32 -0.31
11 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.84 0.31 -0.3
12 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.84 0.31 -0.33
13 AT1G61740 Sulfite exporter TauE/SafE family protein 0.83 0.32 -0.34
14 AT4G10450 Ribosomal protein L6 family 0.83 0.31 -0.33
15 AT1G64090 Reticulan like protein B3 Reticulan like protein B3 0.82 0.33 -0.33
16 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.82 0.32 -0.32
17 AT1G51140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.82 0.33 -0.32
18 AT5G19300 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Protein of unknown
function DUF171 (InterPro:IPR003750); Has 3649 Blast hits
to 1964 proteins in 291 species: Archae - 113; Bacteria -
121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses -
4; Other Eukaryotes - 1703 (source: NCBI BLink).		 0.82 0.33 -0.33
19 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.82 0.32 -0.31
20 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.82 0.32 -0.32
21 AT3G09890 Ankyrin repeat family protein 0.81 0.32 -0.31
22 AT2G29260 NAD(P)-binding Rossmann-fold superfamily protein 0.81 0.32 -0.31
23 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.81 0.33 -0.31
24 AT3G04770 40s ribosomal protein SA B 40s ribosomal protein SA B 0.81 0.31 -0.34
25 AT3G44590 60S acidic ribosomal protein family 0.81 0.31 -0.31
26 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.81 0.32 -0.31
27 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.81 0.3 -0.32
28 AT1G17550 homology to ABI2 homology to ABI2 -0.81 0.32 -0.31
29 AT1G26740 Ribosomal L32p protein family 0.81 0.33 -0.3
30 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.81 0.31 -0.3
31 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.8 0.32 -0.32
32 AT1G04340 HR-like lesion-inducing protein-related 0.8 0.29 -0.29
33 AT5G05470 eukaryotic translation initiation factor 2 alpha subunit ATEIF2-A2, eukaryotic translation
initiation factor 2 alpha subunit,
EIF2-A2		 0.8 0.29 -0.3
34 AT2G31710 Vacuolar ATPase assembly integral membrane protein
VMA21-like domain		 0.8 0.32 -0.31
35 AT4G15850 RNA helicase 1 RNA helicase 1, RNA helicase 1 0.8 0.34 -0.32
36 AT1G05055 general transcription factor II H2 ATGTF2H2, general transcription
factor II H2		 0.8 0.32 -0.32
37 AT5G23900 Ribosomal protein L13e family protein 0.8 0.34 -0.31
38 AT1G61770 Chaperone DnaJ-domain superfamily protein 0.8 0.33 -0.3
39 AT4G26230 Ribosomal protein L31e family protein 0.8 0.28 -0.3
40 AT1G79520 Cation efflux family protein -0.79 0.31 -0.35
41 AT3G23940 dehydratase family 0.79 0.33 -0.3
42 AT1G66070 Translation initiation factor eIF3 subunit 0.79 0.31 -0.33
43 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.79 0.33 -0.32
44 AT3G17609 HY5-homolog HY5-homolog 0.79 0.31 -0.31
45 AT1G14060 GCK domain-containing protein 0.79 0.34 -0.31
46 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.79 0.3 -0.32
47 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.79 0.32 -0.31
48 AT4G09320 Nucleoside diphosphate kinase family protein NDPK1 0.79 0.31 -0.33
49 AT1G07430 highly ABA-induced PP2C gene 2 highly ABA-induced PP2C gene 2 -0.79 0.32 -0.32
50 AT1G74270 Ribosomal protein L35Ae family protein 0.79 0.32 -0.32
51 AT1G77750 Ribosomal protein S13/S18 family 0.79 0.32 -0.32
52 AT4G19860 alpha/beta-Hydrolases superfamily protein -0.78 0.32 -0.32
53 AT5G43970 translocase of outer membrane 22-V ATTOM22-V, translocase of outer
membrane 22-V, TRANSLOCASE OUTER
MITOCHONDRIAL MEMBRANE 22-V		 0.78 0.33 -0.3
54 AT2G01640 unknown protein; Has 51 Blast hits to 51 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.78 0.33 -0.29
55 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.78 0.32 -0.35
56 AT3G05640 Protein phosphatase 2C family protein -0.78 0.32 -0.29
57 AT1G01100 60S acidic ribosomal protein family 0.78 0.33 -0.32
58 AT2G40330 PYR1-like 6 PYR1-like 6, regulatory components
of ABA receptor 9		 0.78 0.29 -0.28
59 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.78 0.32 -0.3
60 AT1G64110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 DUO1-activated ATPase 1 -0.77 0.3 -0.3
61 AT5G26360 TCP-1/cpn60 chaperonin family protein 0.77 0.32 -0.32
62 AT5G23140 nuclear-encoded CLP protease P7 CLPP2, nuclear-encoded CLP
protease P7		 0.77 0.32 -0.33
63 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.77 0.31 -0.31
64 AT5G40530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.77 0.3 -0.29
65 AT1G49410 translocase of the outer mitochondrial membrane 6 translocase of the outer
mitochondrial membrane 6		 0.77 0.32 -0.33
66 AT5G10010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64910.1); Has 33260
Blast hits to 16857 proteins in 1270 species: Archae - 88;
Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants -
1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI
BLink).		 0.77 0.31 -0.31
67 AT3G25120 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.76 0.34 -0.3
68 AT1G32740 SBP (S-ribonuclease binding protein) family protein -0.76 0.3 -0.33
69 AT2G19670 protein arginine methyltransferase 1A ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 1A,
protein arginine methyltransferase
1A		 0.76 0.33 -0.32
70 AT1G28510 Optic atrophy 3 protein (OPA3) 0.76 0.29 -0.33
71 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.76 0.32 -0.34
72 AT3G46820 type one serine/threonine protein phosphatase 5 type one serine/threonine protein
phosphatase 5		 0.76 0.34 -0.3
73 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.76 0.3 -0.32
74 AT2G19385 zinc ion binding 0.76 0.31 -0.3
75 AT5G22290 NAC domain containing protein 89 NAC domain containing protein 89,
fructose-sensing quantitative
trait locus 6, NAC domain
containing protein 89		 -0.75 0.32 -0.35
76 AT5G57050 Protein phosphatase 2C family protein ABA INSENSITIVE 2, AtABI2 -0.75 0.31 -0.31
77 AT4G03200 catalytics -0.75 0.31 -0.32
78 AT3G19620 Glycosyl hydrolase family protein -0.74 0.32 -0.31
79 AT5G01990 Auxin efflux carrier family protein -0.74 0.32 -0.31
80 AT4G19390 Uncharacterised protein family (UPF0114) -0.73 0.3 -0.31
81 AT5G66400 Dehydrin family protein ARABIDOPSIS THALIANA
DROUGHT-INDUCED 8, RESPONSIVE TO
ABA 18		 -0.73 0.32 -0.32
82 AT3G29575 ABI five binding protein 3 ABI five binding protein 3 -0.73 0.35 -0.3
83 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.73 0.33 -0.3
84 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 -0.73 0.32 -0.31
85 AT2G18050 histone H1-3 histone H1-3 -0.73 0.3 -0.31
86 AT3G02480 Late embryogenesis abundant protein (LEA) family protein -0.72 0.32 -0.32
87 AT5G62090 SEUSS-like 2 SEUSS-like 2 -0.72 0.32 -0.3
88 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.72 0.28 -0.32
89 AT5G01300 PEBP (phosphatidylethanolamine-binding protein) family
protein		 -0.72 0.34 -0.33
90 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.31 -0.33
91 AT4G17030 expansin-like B1 AT-EXPR, expansin-like B1,
ATEXPR1, ATHEXP BETA 3.1,
expansin-like B1, EXPR		 -0.72 0.34 -0.32
92 AT2G19900 NADP-malic enzyme 1 Arabidopsis thaliana NADP-malic
enzyme 1, NADP-malic enzyme 1		 -0.72 0.29 -0.3
93 AT3G61890 homeobox 12 homeobox 12, ARABIDOPSIS THALIANA
HOMEOBOX 12, homeobox 12		 -0.72 0.31 -0.31
94 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A -0.72 0.31 -0.33
95 AT1G68020 UDP-Glycosyltransferase / trehalose-phosphatase family
protein		 ATTPS6, TREHALOSE -6-PHOSPHATASE
SYNTHASE S6		 -0.71 0.33 -0.33
96 AT4G38350 Patched family protein -0.71 0.33 -0.33
97 AT2G21590 Glucose-1-phosphate adenylyltransferase family protein APL4 -0.71 0.3 -0.33
98 AT3G20300 Protein of unknown function (DUF3537) -0.71 0.34 -0.31
99 AT4G33550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.7 0.32 -0.32
100 AT5G49990 Xanthine/uracil permease family protein -0.7 0.29 -0.32
101 AT5G12140 cystatin-1 cystatin-1, cystatin-1 -0.7 0.31 -0.32
102 AT1G68570 Major facilitator superfamily protein -0.7 0.34 -0.31
103 AT3G14067 Subtilase family protein -0.7 0.31 -0.32
104 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.29
105 AT1G69260 ABI five binding protein ABI five binding protein -0.69 0.31 -0.31
106 AT1G80310 sulfate transmembrane transporters molybdate transporter 2 -0.69 0.3 -0.32
107 AT1G70420 Protein of unknown function (DUF1645) -0.69 0.33 -0.3
108 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.31 -0.32
109 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.68 0.31 -0.31
110 AT3G54390 sequence-specific DNA binding transcription factors -0.68 0.34 -0.31
111 AT5G59320 lipid transfer protein 3 lipid transfer protein 3 -0.68 0.31 -0.33
112 AT3G26740 CCR-like CCR-like -0.68 0.33 -0.31
113 AT3G07870 F-box and associated interaction domains-containing protein -0.68 0.31 -0.31
114 AT4G14270 Protein containing PAM2 motif which mediates interaction
with the PABC domain of polyadenyl binding proteins.		 -0.68 0.33 -0.31
115 AT2G36640 embryonic cell protein 63 embryonic cell protein 63,
embryonic cell protein 63		 -0.67 0.31 -0.31
116 AT1G69270 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.67 0.34 -0.31
117 AT5G16630 DNA repair protein Rad4 family ATRAD4, RAD4 -0.67 0.3 -0.31
118 AT1G28230 purine permease 1 ATPUP1, purine permease 1 -0.66 0.33 -0.31
119 AT1G52690 Late embryogenesis abundant protein (LEA) family protein LATE EMBRYOGENESIS ABUNDANT 7 -0.66 0.31 -0.33
120 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.66 0.31 -0.31
121 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 -0.66 0.31 -0.28
122 AT5G52300 CAP160 protein LOW-TEMPERATURE-INDUCED 65,
RESPONSIVE TO DESSICATION 29B		 -0.66 0.32 -0.3
123 AT4G15475 F-box/RNI-like superfamily protein -0.66 0.3 -0.32
124 AT5G57360 Galactose oxidase/kelch repeat superfamily protein ADAGIO 1, FKF1-LIKE PROTEIN 2, LOV
KELCH PROTEIN 1, ZEITLUPE		 -0.66 0.31 -0.32
125 AT5G03190 conserved peptide upstream open reading frame 47 conserved peptide upstream open
reading frame 47		 -0.66 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
126 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.92 0.43 -0.42 C0123
127 C0189 Nicotinic acid - Nicotinate pyridine nucleotide cycling (plants),
aldoxime degradation 		-0.79 0.3 -0.32 C0189
128 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - -0.77 0.44 -0.44