AT3G48880 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G48880
Description RNI-like superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G48880 RNI-like superfamily protein 1 0.29 -0.31
2 AT3G02555 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits
to 130 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.32 -0.31
3 AT1G49970 CLP protease proteolytic subunit 1 CLP protease proteolytic subunit
1, NUCLEAR CLPP 5, SUPPRESSOR OF
VARIEGATION 2		 0.74 0.31 -0.3
4 AT4G40040 Histone superfamily protein 0.73 0.35 -0.31
5 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 0.73 0.33 -0.31
6 AT3G62760 Glutathione S-transferase family protein ATGSTF13 -0.73 0.32 -0.34
7 AT5G01200 Duplicated homeodomain-like superfamily protein 0.71 0.32 -0.32
8 AT2G15695 Protein of unknown function DUF829, transmembrane 53 0.71 0.32 -0.33
9 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 0.7 0.33 -0.32
10 AT1G12030 Protein of unknown function (DUF506) 0.7 0.3 -0.32
11 AT1G32450 nitrate transporter 1.5 nitrate transporter 1.5 -0.7 0.31 -0.29
12 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily
protein		 0.69 0.33 -0.33
13 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 0.68 0.32 -0.31
14 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 0.68 0.32 -0.32
15 AT1G67890 PAS domain-containing protein tyrosine kinase family
protein		 0.67 0.33 -0.3
16 AT3G62820 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.67 0.32 -0.32
17 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 0.67 0.3 -0.32
18 AT5G48300 ADP glucose pyrophosphorylase 1 ADP glucose pyrophosphorylase 1,
ADP-GLUCOSE PYROPHOSPHORYLASE
SMALL SUBUNIT 1		 0.67 0.31 -0.3
19 AT1G03010 Phototropic-responsive NPH3 family protein -0.67 0.32 -0.31
20 AT5G25820 Exostosin family protein -0.66 0.3 -0.32
21 AT1G08110 lactoylglutathione lyase family protein / glyoxalase I
family protein		 0.66 0.31 -0.31
22 AT1G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15620.1); Has 154 Blast hits
to 146 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.33 -0.34
23 AT1G21310 extensin 3 extensin 3, extensin 3,
ROOT-SHOOT-HYPOCOTYL DEFECTIVE		 -0.66 0.33 -0.31
24 AT1G76660 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in
60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi -
22; Plants - 125; Viruses - 4; Other Eukaryotes - 139
(source: NCBI BLink).		 0.65 0.31 -0.34
25 AT2G36840 ACT-like superfamily protein ACT domain repeats 10 0.65 0.27 -0.33
26 AT1G48620 high mobility group A5 high mobility group A5 0.65 0.32 -0.3
27 AT2G40810 homolog of yeast autophagy 18C homolog of yeast autophagy 18C,
homolog of yeast autophagy 18C		 0.65 0.31 -0.3
28 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 -0.65 0.31 -0.29
29 AT5G11920 6-&1-fructan exohydrolase 6-&1-fructan exohydrolase,
6-&1-fructan exohydrolase		 -0.65 0.32 -0.32
30 AT5G14860 UDP-Glycosyltransferase superfamily protein 0.65 0.33 -0.31
31 AT5G60280 Concanavalin A-like lectin protein kinase family protein -0.65 0.31 -0.31
32 AT5G13180 NAC domain containing protein 83 NAC domain containing protein 83,
NAC domain containing protein 83,
VND-interacting 2		 0.65 0.32 -0.32
33 AT5G15380 domains rearranged methylase 1 domains rearranged methylase 1 -0.65 0.34 -0.32
34 AT3G59490 unknown protein; Has 30 Blast hits to 30 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.64 0.32 -0.33
35 AT2G15890 maternal effect embryo arrest 14 maternal effect embryo arrest 14 0.64 0.3 -0.3
36 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.34 -0.32
37 AT5G67330 natural resistance associated macrophage protein 4 ARABIDOPSIS THALIANA NATURAL
RESISTANCE ASSOCIATED MACROPHAGE
PROTEIN 4, natural resistance
associated macrophage protein 4		 0.64 0.3 -0.32
38 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.64 0.34 -0.31
39 AT3G04730 indoleacetic acid-induced protein 16 indoleacetic acid-induced protein
16		 0.64 0.32 -0.29
40 AT2G32710 Cyclin-dependent kinase inhibitor family protein CYCLIN-DEPENDENT KINASE INHIBITOR
2, INTERACTORS OF CDC2 KINASE 7,
KRP4, KIP-RELATED PROTEIN 4		 0.64 0.32 -0.32
41 AT1G34750 Protein phosphatase 2C family protein -0.64 0.3 -0.29
42 AT1G14570 UBX domain-containing protein 0.63 0.33 -0.32
43 AT1G10400 UDP-Glycosyltransferase superfamily protein -0.63 0.31 -0.31
44 AT1G30900 VACUOLAR SORTING RECEPTOR 6 binding protein of 80 kDa 3;3,
VACUOLAR SORTING RECEPTOR 3;3,
VACUOLAR SORTING RECEPTOR 6		 -0.63 0.31 -0.33
45 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.31 -0.33
46 AT5G52950 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.63 0.33 -0.3
47 AT3G55160 unknown protein; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2428, death-receptor-like
(InterPro:IPR019442); Has 357 Blast hits to 330 proteins in
163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi
- 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45
(source: NCBI BLink).		 -0.63 0.35 -0.3
48 AT1G14780 MAC/Perforin domain-containing protein -0.63 0.32 -0.29
49 AT5G65090 DNAse I-like superfamily protein BRISTLED 1, DEFORMED ROOT HAIRS 4,
MRH3		 -0.62 0.35 -0.33
50 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 -0.62 0.31 -0.32
51 AT4G12350 myb domain protein 42 myb domain protein 42, myb domain
protein 42		 -0.62 0.3 -0.31
52 AT5G19580 glyoxal oxidase-related protein 0.62 0.29 -0.31
53 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family -0.62 0.31 -0.33
54 AT5G39860 basic helix-loop-helix (bHLH) DNA-binding family protein BASIC HELIX-LOOP-HELIX PROTEIN
136, BANQUO 1, PACLOBUTRAZOL
RESISTANCE1		 0.62 0.31 -0.3
55 AT1G64980 Nucleotide-diphospho-sugar transferases superfamily protein 0.62 0.3 -0.32
56 AT5G26310 UDP-Glycosyltransferase superfamily protein UGT72E3 -0.62 0.32 -0.31
57 AT2G47070 squamosa promoter binding protein-like 1 squamosa promoter binding
protein-like 1		 0.62 0.31 -0.32
58 AT5G26960 Galactose oxidase/kelch repeat superfamily protein 0.62 0.35 -0.29
59 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein -0.61 0.32 -0.31
60 AT2G46070 mitogen-activated protein kinase 12 ATMPK12, MAPK12, mitogen-activated
protein kinase 12		 0.61 0.33 -0.32
61 AT5G59780 myb domain protein 59 MYB DOMAIN PROTEIN 59, ATMYB59-1,
ATMYB59-2, ATMYB59-3, myb domain
protein 59		 -0.61 0.31 -0.33
62 AT5G61190 putative endonuclease or glycosyl hydrolase with C2H2-type
zinc finger domain		 -0.61 0.34 -0.31
63 AT3G21600 Senescence/dehydration-associated protein-related 0.61 0.31 -0.31
64 AT3G18290 zinc finger protein-related BRUTUS, embryo defective 2454 0.61 0.32 -0.32
65 AT4G17486 PPPDE putative thiol peptidase family protein 0.61 0.31 -0.33
66 AT4G07460 transposable element gene 0.61 0.31 -0.3
67 AT2G27380 extensin proline-rich 1 extensin proline-rich 1, extensin
proline-rich 1		 -0.61 0.33 -0.32
68 AT3G12480 nuclear factor Y, subunit C11 nuclear factor Y, subunit C11 0.6 0.3 -0.31
69 AT4G36780 BES1/BZR1 homolog 2 BES1/BZR1 homolog 2 0.6 0.29 -0.3
70 AT1G26920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G69760.1); Has 47 Blast hits
to 47 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 7; Plants - 34; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 0.6 0.31 -0.32
71 AT5G52910 timeless family protein TIMELESS -0.6 0.3 -0.31
72 AT1G13420 sulfotransferase 4B ARABIDOPSIS THALIANA
SULFOTRANSFERASE 4B,
sulfotransferase 4B		 -0.6 0.32 -0.31
73 AT4G32870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.6 0.31 -0.34
74 AT2G46850 Protein kinase superfamily protein -0.6 0.31 -0.3
75 AT2G19640 ASH1-related protein 2 ASH1-related 2, SET DOMAIN PROTEIN
39		 -0.59 0.3 -0.3
76 AT5G60310 Concanavalin A-like lectin protein kinase family protein -0.59 0.31 -0.32
77 AT5G01550 lectin receptor kinase a4.1 lectin receptor kinase a4.1 -0.59 0.32 -0.31
78 AT1G68150 WRKY DNA-binding protein 9 ATWRKY9, WRKY DNA-binding protein
9		 -0.58 0.32 -0.3
79 AT1G74600 pentatricopeptide (PPR) repeat-containing protein organelle transcript processing 87 -0.58 0.31 -0.33
80 AT2G22920 serine carboxypeptidase-like 12 serine carboxypeptidase-like 12 -0.57 0.34 -0.32
81 AT4G12220 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT4G12210.1); Has 24 Blast hits
to 21 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.33 -0.34
82 AT2G35150 EXORDIUM like 1 EXORDIUM LIKE 7 -0.57 0.29 -0.31
83 AT2G01720 Ribophorin I -0.57 0.32 -0.32
84 AT4G11690 Pentatricopeptide repeat (PPR-like) superfamily protein -0.57 0.32 -0.31
85 AT5G02350 Cysteine/Histidine-rich C1 domain family protein -0.56 0.34 -0.3
86 AT5G62480 glutathione S-transferase tau 9 glutathione S-transferase tau 9,
GLUTATHIONE S-TRANSFERASE 14,
GLUTATHIONE S-TRANSFERASE 14B,
glutathione S-transferase tau 9		 -0.56 0.28 -0.33
87 AT1G74350 Intron maturase, type II family protein -0.56 0.33 -0.32
88 AT3G01220 homeobox protein 20 homeobox protein 20, homeobox
protein 20		 -0.56 0.31 -0.32