AT3G48250 : Buthionine sulfoximine-insensitive roots 6
Query Information
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AGICode AT3G48250
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 1 0.31 -0.31
2 AT4G38150 Pentatricopeptide repeat (PPR) superfamily protein 0.85 0.31 -0.31
3 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.84 0.31 -0.31
4 AT4G04180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.83 0.32 -0.31
5 AT5G12220 las1-like family protein 0.81 0.31 -0.32
6 AT2G34357 ARM repeat superfamily protein 0.81 0.33 -0.32
7 AT3G15000 cobalt ion binding 0.8 0.32 -0.3
8 AT1G71850 Ubiquitin carboxyl-terminal hydrolase family protein 0.8 0.3 -0.33
9 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.79 0.29 -0.31
10 AT5G46920 Intron maturase, type II family protein 0.79 0.3 -0.33
11 AT3G26782 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.32 -0.31
12 AT4G10060 Beta-glucosidase, GBA2 type family protein -0.77 0.33 -0.32
13 AT1G30960 GTP-binding family protein 0.77 0.32 -0.33
14 AT4G30993 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.76 0.31 -0.32
15 AT4G30990 ARM repeat superfamily protein 0.76 0.29 -0.31
16 AT3G11964 RNA binding;RNA binding 0.76 0.33 -0.33
17 AT5G19350 RNA-binding (RRM/RBD/RNP motifs) family protein 0.75 0.32 -0.32
18 AT5G50315 transposable element gene 0.75 0.32 -0.31
19 AT5G16930 AAA-type ATPase family protein 0.75 0.31 -0.32
20 AT1G61640 Protein kinase superfamily protein 0.75 0.31 -0.31
21 AT1G77030 hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases		 0.75 0.31 -0.32
22 AT1G62730 Terpenoid synthases superfamily protein 0.74 0.3 -0.32
23 AT5G54660 HSP20-like chaperones superfamily protein -0.74 0.32 -0.32
24 AT1G08570 atypical CYS HIS rich thioredoxin 4 atypical CYS HIS rich thioredoxin
4		 -0.73 0.31 -0.31
25 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 0.73 0.3 -0.32
26 AT3G04610 RNA-binding KH domain-containing protein flowering locus KH domain 0.73 0.29 -0.3
27 AT5G13270 Pentatricopeptide repeat (PPR) superfamily protein REQUIRED FOR ACCD RNA EDITING 1 0.73 0.31 -0.32
28 AT1G13020 eukaryotic initiation factor 4B2 eukaryotic initiation factor 4B2 0.73 0.32 -0.32
29 AT5G05920 deoxyhypusine synthase deoxyhypusine synthase, embryo sac
development arrest 22		 0.73 0.33 -0.31
30 AT3G43300 HOPM interactor 7 HOPM interactor 7, BFA-VISUALIZED
ENDOCYTIC TRAFFICKING DEFECTIVE1		 0.73 0.29 -0.33
31 AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.72 0.3 -0.32
32 AT5G58130 RNA-binding (RRM/RBD/RNP motifs) family protein REPRESSOR OF SILENCING 3 0.72 0.31 -0.29
33 AT4G33650 dynamin-related protein 3A ARABIDOPSIS DYNAMIN-LIKE 2,
ABERRANT PEROXISOME MORPHOLOGY 1,
dynamin-related protein 3A		 0.72 0.3 -0.3
34 AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.72 0.3 -0.31
35 AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.72 0.34 -0.31
36 AT5G52420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.72 0.33 -0.32
37 AT5G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.72 0.33 -0.32
38 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.32 -0.31
39 AT1G19370 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.72 0.31 -0.32
40 AT2G32730 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.72 0.32 -0.33
41 AT2G39000 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.72 0.33 -0.29
42 AT3G27390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G40640.1); Has 101 Blast
hits to 99 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.32 -0.31
43 AT1G06780 galacturonosyltransferase 6 galacturonosyltransferase 6 0.71 0.3 -0.32
44 AT3G25545 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 38
Blast hits to 38 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.29 -0.31
45 AT4G30150 CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA
processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast
hits to 49 proteins in 21 species: Archae - 0; Bacteria -
2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.71 0.33 -0.33
46 AT5G25800 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.71 0.33 -0.3
47 AT1G11390 Protein kinase superfamily protein 0.71 0.32 -0.32
48 AT3G44110 DNAJ homologue 3 ATJ, DNAJ homologue 3, J3 0.71 0.31 -0.32
49 AT5G38560 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 8, proline-rich
extensin-like receptor kinase 8		 0.71 0.33 -0.33
50 AT3G19630 Radical SAM superfamily protein 0.7 0.3 -0.32
51 AT3G19800 Protein of unknown function (DUF177) -0.7 0.29 -0.3
52 AT2G44020 Mitochondrial transcription termination factor family
protein		 0.7 0.3 -0.32
53 AT2G38820 Protein of unknown function (DUF506) -0.7 0.33 -0.32
54 AT1G02460 Pectin lyase-like superfamily protein 0.7 0.33 -0.32
55 AT5G18440 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental
retardation-interacting protein 1, conserved region
(InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins
in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339;
Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes -
619 (source: NCBI BLink).		 AtNUFIP, nuclear FMRP-interacting
protein		 0.7 0.32 -0.31
56 AT3G11620 alpha/beta-Hydrolases superfamily protein -0.7 0.32 -0.34
57 AT5G47720 Thiolase family protein -0.7 0.31 -0.3
58 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.31 -0.31
59 AT2G20370 Exostosin family protein AtMUR3, KATAMARI 1, MURUS 3 0.7 0.3 -0.33
60 AT4G12240 zinc finger (C2H2 type) family protein 0.69 0.29 -0.32
61 AT3G27550 RNA-binding CRS1 / YhbY (CRM) domain protein 0.69 0.3 -0.32
62 AT5G05820 Nucleotide-sugar transporter family protein 0.69 0.31 -0.31
63 AT4G02570 cullin 1 cullin 1, AUXIN RESISTANT 6,
cullin 1		 0.69 0.32 -0.35
64 AT1G31010 organellar single-stranded DNA binding protein 4 organellar single-stranded DNA
binding protein 4		 0.69 0.3 -0.3
65 AT5G54580 RNA-binding (RRM/RBD/RNP motifs) family protein 0.69 0.31 -0.29
66 AT4G03430 pre-mRNA splicing factor-related EMBRYO DEFECTIVE 2770, STABILIZED
1		 0.69 0.31 -0.32
67 AT4G34560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits
to 66 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.31 -0.32
68 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.69 0.31 -0.32
69 AT2G25430 epsin N-terminal homology (ENTH) domain-containing protein
/ clathrin assembly protein-related		 0.69 0.32 -0.3
70 AT5G14580 polyribonucleotide nucleotidyltransferase, putative 0.68 0.29 -0.3
71 AT1G22770 gigantea protein (GI) FB, GIGANTEA 0.68 0.33 -0.31
72 AT5G24460 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.68 0.32 -0.31
73 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.33 -0.3
74 AT1G49180 protein kinase family protein -0.68 0.32 -0.31
75 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.68 0.34 -0.32
76 AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / ubiquitin family protein		 0.68 0.3 -0.31
77 AT2G16920 ubiquitin-conjugating enzyme 23 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 2, ubiquitin-conjugating
enzyme 23		 0.68 0.32 -0.31
78 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.35 -0.3
79 AT3G23080 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.68 0.28 -0.28
80 AT1G31370 Ubiquitin-specific protease family C19-related protein -0.67 0.29 -0.32
81 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein -0.67 0.29 -0.3
82 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4		 -0.67 0.3 -0.32
83 AT1G67080 abscisic acid (aba)-deficient 4 abscisic acid (ABA)-deficient 4 -0.66 0.32 -0.29
84 AT4G16480 inositol transporter 4 ATINT4, inositol transporter 4 -0.66 0.3 -0.34
85 AT3G63480 ATP binding microtubule motor family protein -0.66 0.31 -0.3
86 AT3G15940 UDP-Glycosyltransferase superfamily protein -0.65 0.32 -0.33
87 AT2G46220 Uncharacterized conserved protein (DUF2358) -0.65 0.33 -0.33
88 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.65 0.32 -0.32
89 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 -0.65 0.3 -0.32
90 AT1G25375 Metallo-hydrolase/oxidoreductase superfamily protein -0.65 0.33 -0.31
91 AT2G40410 Staphylococcal nuclease homologue -0.65 0.31 -0.3
92 AT4G01510 Arv1-like protein ARV2 -0.65 0.32 -0.32
93 AT1G16730 unknown protein 6 unknown protein 6 -0.65 0.32 -0.3
94 AT2G24280 alpha/beta-Hydrolases superfamily protein -0.65 0.33 -0.32
95 AT3G17470 Ca2+-activated RelA/spot homolog ATCRSH, Ca2+-activated RelA/spot
homolog		 -0.65 0.29 -0.32
96 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.64 0.32 -0.31
97 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.64 0.35 -0.32
98 AT5G59960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.64 0.33 -0.29
99 AT3G13672 TRAF-like superfamily protein -0.64 0.3 -0.33
100 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.64 0.31 -0.31
101 AT1G22540 Major facilitator superfamily protein -0.63 0.32 -0.32
102 AT2G23780 RING/U-box superfamily protein -0.63 0.32 -0.33
103 AT5G49380 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana
protein match is: binding (TAIR:AT3G06670.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.31 -0.35
104 AT5G03230 Protein of unknown function, DUF584 -0.62 0.3 -0.34
105 AT4G35550 WUSCHEL related homeobox 13 ATWOX13, HB-4, WUSCHEL related
homeobox 13		 -0.62 0.3 -0.33
106 AT5G28020 cysteine synthase D2 CYSTEINE SYNTHASE D2, cysteine
synthase D2		 -0.62 0.31 -0.32
107 AT2G18470 roline-rich extensin-like receptor kinase 4 proline-rich extensin-like
receptor kinase 4, proline-rich
extensin-like receptor kinase 4		 -0.62 0.31 -0.31
108 AT3G09410 Pectinacetylesterase family protein -0.62 0.31 -0.33
109 AT2G03310 unknown protein; Has 17 Blast hits to 17 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.33 -0.31
110 AT4G37790 Homeobox-leucine zipper protein family HAT22 -0.61 0.32 -0.31
111 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.6 0.31 -0.32
112 AT2G17640 Trimeric LpxA-like enzymes superfamily protein ATSERAT3;1, SERINE
ACETYLTRANSFERASE 106		 -0.6 0.33 -0.31
113 AT4G31270 sequence-specific DNA binding transcription factors -0.6 0.34 -0.32
114 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 -0.6 0.33 -0.33
115 AT2G07110 BEST Arabidopsis thaliana protein match is: Ribosomal
protein S5 domain 2-like superfamily protein
(TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.6 0.34 -0.3
116 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 -0.59 0.32 -0.31
117 AT4G13150 unknown protein; Has 83 Blast hits to 82 proteins in 37
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.59 0.32 -0.31
118 AT3G18270 cytochrome P450, family 77, subfamily A, polypeptide 5
pseudogene		 cytochrome P450, family 77,
subfamily A, polypeptide 5
pseudogene		 -0.59 0.33 -0.32
119 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.59 0.31 -0.28
120 AT4G27670 heat shock protein 21 heat shock protein 21 -0.59 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
121 C0161 MST_1566.3 - - - 0.77 0.48 -0.45
122 C0163 MST_1589.2 - - - 0.74 0.45 -0.43
123 C0173 MST_2301.7 - - - 0.73 0.44 -0.42
124 C0160 MST_1509.5 - - - 0.73 0.47 -0.44
125 C0215 PR_MST_2527.1 - - - 0.73 0.44 -0.44