AT3G48070 : -
Query Information
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AGICode AT3G48070
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G48070 RING/U-box superfamily protein 1 0.34 -0.33
2 AT4G02290 glycosyl hydrolase 9B13 glycosyl hydrolase 9B13, glycosyl
hydrolase 9B13		 -0.77 0.32 -0.31
3 AT1G06930 unknown protein; Has 4478 Blast hits to 355 proteins in 82
species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi -
125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800
(source: NCBI BLink).		 -0.76 0.3 -0.31
4 AT1G10350 DNAJ heat shock family protein 0.74 0.31 -0.32
5 AT4G32780 phosphoinositide binding -0.74 0.32 -0.3
6 AT3G63360 defensin-related -0.73 0.33 -0.32
7 AT2G30210 laccase 3 laccase 3 -0.73 0.33 -0.32
8 AT2G26360 Mitochondrial substrate carrier family protein -0.73 0.31 -0.33
9 AT3G54260 TRICHOME BIREFRINGENCE-LIKE 36 TRICHOME BIREFRINGENCE-LIKE 36 -0.73 0.31 -0.33
10 AT2G38410 ENTH/VHS/GAT family protein 0.73 0.3 -0.3
11 AT1G73640 RAB GTPase homolog A6A RAB GTPase homolog A6A, RAB GTPase
homolog A6A		 -0.72 0.32 -0.32
12 AT1G68070 Zinc finger, C3HC4 type (RING finger) family protein 0.72 0.31 -0.32
13 AT3G51720 Plant protein of unknown function (DUF827) -0.72 0.3 -0.32
14 AT3G09320 DHHC-type zinc finger family protein 0.71 0.34 -0.35
15 AT5G08139 RING/U-box superfamily protein 0.71 0.34 -0.31
16 AT4G15090 FRS (FAR1 Related Sequences) transcription factor family FAR-RED IMPAIRED RESPONSE 1 0.71 0.31 -0.33
17 AT4G20390 Uncharacterised protein family (UPF0497) -0.7 0.32 -0.31
18 AT1G71740 unknown protein; Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.32 -0.33
19 AT1G75420 UDP-Glycosyltransferase superfamily protein 0.7 0.29 -0.32
20 AT3G60850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 11 growth stages; Has 42
Blast hits to 42 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.7 0.32 -0.32
21 AT4G23930 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.7 0.32 -0.33
22 AT2G04500 Cysteine/Histidine-rich C1 domain family protein -0.7 0.31 -0.32
23 AT4G16500 Cystatin/monellin superfamily protein 0.7 0.31 -0.32
24 AT2G27370 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 3		 -0.7 0.33 -0.3
25 AT3G62760 Glutathione S-transferase family protein ATGSTF13 -0.7 0.33 -0.32
26 AT1G24620 EF hand calcium-binding protein family -0.7 0.32 -0.32
27 AT1G21090 Cupredoxin superfamily protein -0.69 0.33 -0.32
28 AT1G70710 glycosyl hydrolase 9B1 glycosyl hydrolase 9B1, CELLULASE
1, glycosyl hydrolase 9B1		 -0.69 0.29 -0.33
29 AT1G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15620.1); Has 154 Blast hits
to 146 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.31 -0.33
30 AT3G19280 fucosyltransferase 11 ATFUT11, FUCT1, FUCTA,
fucosyltransferase 11		 0.69 0.32 -0.3
31 AT2G23530 Zinc-finger domain of monoamine-oxidase A repressor R1 -0.68 0.32 -0.32
32 AT1G04030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits
to 1511 proteins in 238 species: Archae - 7; Bacteria -
164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses -
22; Other Eukaryotes - 943 (source: NCBI BLink).		 -0.68 0.3 -0.31
33 AT2G45980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 ATG8-interacting protein 1 0.68 0.31 -0.31
34 AT2G29750 UDP-glucosyl transferase 71C1 UDP-glucosyl transferase 71C1 -0.68 0.3 -0.33
35 AT3G22540 Protein of unknown function (DUF1677) -0.68 0.34 -0.35
36 AT1G41870 transposable element gene -0.68 0.32 -0.32
37 AT2G35160 SU(VAR)3-9 homolog 5 SET DOMAIN-CONTAINING PROTEIN 9,
SU(VAR)3-9 homolog 5		 -0.68 0.32 -0.32
38 AT4G20230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.68 0.3 -0.3
39 AT4G16146 cAMP-regulated phosphoprotein 19-related protein 0.68 0.33 -0.29
40 AT2G39040 Peroxidase superfamily protein -0.68 0.32 -0.31
41 AT1G28540 unknown protein; Has 25 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.32 -0.33
42 AT5G49550 Putative homolog of mammalian BLOC-1 Subunit 2. Protein -
protein interaction with BLOS1.		 BLOC subunit 2 0.67 0.31 -0.3
43 AT5G59610 Chaperone DnaJ-domain superfamily protein 0.67 0.32 -0.3
44 AT5G19030 RNA-binding (RRM/RBD/RNP motifs) family protein 0.67 0.3 -0.29
45 AT5G42180 Peroxidase superfamily protein peroxidase 64 -0.67 0.33 -0.32
46 AT2G28670 Disease resistance-responsive (dirigent-like protein)
family protein		 ENHANCED SUBERIN 1 -0.67 0.32 -0.33
47 AT3G53000 phloem protein 2-A15 phloem protein 2-A15, phloem
protein 2-A15		 0.66 0.28 -0.36
48 AT1G20693 high mobility group B2 HIGH MOBILITY GROUP BETA 1, high
mobility group B2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP D 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP D 2		 0.66 0.32 -0.33
49 AT3G11210 SGNH hydrolase-type esterase superfamily protein 0.66 0.33 -0.29
50 AT1G79510 Uncharacterized conserved protein (DUF2358) 0.66 0.31 -0.31
51 AT2G38420 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.29 -0.3
52 AT1G28400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins
in 668 species: Archae - 72; Bacteria - 1460; Metazoa -
1191; Fungi - 1038; Plants - 174; Viruses - 64; Other
Eukaryotes - 41375 (source: NCBI BLink).		 -0.66 0.32 -0.29
53 AT4G31910 HXXXD-type acyl-transferase family protein -0.66 0.28 -0.32
54 AT5G18760 RING/U-box superfamily protein 0.66 0.31 -0.31
55 AT3G62880 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-4 0.65 0.3 -0.33
56 AT2G22920 serine carboxypeptidase-like 12 serine carboxypeptidase-like 12 -0.65 0.32 -0.32
57 AT3G29780 ralf-like 27 ralf-like 27 -0.65 0.3 -0.33
58 AT1G43680 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT5G36228.1); Has 59 Blast
hits to 57 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.3 -0.32
59 AT5G27330 Prefoldin chaperone subunit family protein -0.65 0.3 -0.3
60 AT5G37690 SGNH hydrolase-type esterase superfamily protein -0.65 0.3 -0.32
61 AT1G11900 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.31 -0.31
62 AT2G20515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 7 growth stages; Has 71 Blast hits to 71
proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.65 0.3 -0.32
63 AT4G27750 binding IMPAIRED SUCROSE INDUCTION 1 0.65 0.32 -0.31
64 AT4G37730 basic leucine-zipper 7 basic leucine-zipper 7, basic
leucine-zipper 7		 -0.65 0.32 -0.33
65 AT5G66815 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.65 0.34 -0.33
66 AT5G44550 Uncharacterised protein family (UPF0497) -0.65 0.32 -0.32
67 AT4G31830 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.3 -0.31
68 AT4G36810 geranylgeranyl pyrophosphate synthase 1 geranylgeranyl pyrophosphate
synthase 1		 0.64 0.3 -0.32
69 AT4G37950 Rhamnogalacturonate lyase family protein -0.64 0.33 -0.33
70 AT2G43480 Peroxidase superfamily protein -0.64 0.29 -0.31
71 AT1G31790 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.33 -0.31
72 AT5G42000 ORMDL family protein 0.64 0.31 -0.3
73 AT1G72760 Protein kinase superfamily protein 0.64 0.31 -0.34
74 AT3G27090 DCD (Development and Cell Death) domain protein 0.64 0.31 -0.31
75 AT1G57590 Pectinacetylesterase family protein -0.64 0.31 -0.32
76 AT4G31410 Protein of unknown function (DUF1644) 0.64 0.28 -0.32
77 AT2G03540 transposable element gene 0.64 0.32 -0.32
78 AT2G40160 Plant protein of unknown function (DUF828) TBL30 -0.64 0.32 -0.31
79 AT4G17930 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.32 -0.3
80 AT1G72200 RING/U-box superfamily protein -0.64 0.32 -0.32
81 AT1G77690 like AUX1 3 like AUX1 3 -0.63 0.34 -0.32
82 AT1G54520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1517 (InterPro:IPR010903);
Has 276 Blast hits to 275 proteins in 83 species: Archae -
0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113;
Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).		 0.63 0.3 -0.32
83 AT1G43020 Protein of unknown function, DUF547 -0.63 0.28 -0.32
84 AT1G03040 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.63 0.32 -0.3
85 AT3G59850 Pectin lyase-like superfamily protein -0.63 0.32 -0.3
86 AT1G27700 Syntaxin/t-SNARE family protein 0.63 0.31 -0.34
87 AT2G24530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.63 0.34 -0.31
88 AT5G06265 hyaluronan mediated motility receptor-related -0.63 0.31 -0.32
89 AT2G36100 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 1		 -0.63 0.31 -0.32
90 AT1G08630 threonine aldolase 1 threonine aldolase 1 0.63 0.32 -0.32
91 AT4G26320 arabinogalactan protein 13 arabinogalactan protein 13 -0.63 0.34 -0.31
92 AT3G11520 CYCLIN B1;3 CYCLIN 2, CYCLIN B1;3 -0.63 0.29 -0.33
93 AT5G57570 GCK domain-containing protein 0.62 0.32 -0.32
94 AT3G14410 Nucleotide/sugar transporter family protein 0.62 0.31 -0.32
95 AT3G24810 Cyclin-dependent kinase inhibitor family protein ICK3, kip-related protein 5 -0.62 0.34 -0.32
96 AT4G22950 AGAMOUS-like 19 AGAMOUS-like 19, GL19 -0.62 0.33 -0.33
97 AT3G26640 Transducin/WD40 repeat-like superfamily protein LIGHT-REGULATED WD 2 0.62 0.33 -0.32
98 AT3G57950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, petal differentiation
and expansion stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast
hits to 81 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.33 -0.32
99 AT3G20480 tetraacyldisaccharide 4'-kinase family protein AtLpxK, lipid X K -0.62 0.33 -0.32
100 AT4G27540 prenylated RAB acceptor 1.H prenylated RAB acceptor 1.H 0.62 0.31 -0.33
101 AT1G48510 Surfeit locus 1 cytochrome c oxidase biogenesis protein -0.62 0.34 -0.3
102 AT1G55530 RING/U-box superfamily protein 0.62 0.32 -0.31
103 AT4G04500 cysteine-rich RLK (RECEPTOR-like protein kinase) 37 cysteine-rich RLK (RECEPTOR-like
protein kinase) 37		 -0.62 0.31 -0.31
104 AT4G19850 lectin-related ARABIDOPSIS THALIANA PHLOEM
PROTEIN 2-A2, phloem protein 2-A2,
PP2A2		 0.62 0.31 -0.31
105 AT1G01650 SIGNAL PEPTIDE PEPTIDASE-LIKE 4 ARABIDOPSIS THALIANA SIGNAL
PEPTIDE PEPTIDASE-LIKE 4, SIGNAL
PEPTIDE PEPTIDASE-LIKE 4		 0.62 0.33 -0.33
106 AT5G06200 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 4		 -0.62 0.31 -0.32
107 AT2G15440 Protein of unknown function (DUF579) -0.62 0.33 -0.31
108 AT2G35770 serine carboxypeptidase-like 28 serine carboxypeptidase-like 28 -0.61 0.33 -0.33
109 AT4G12920 Eukaryotic aspartyl protease family protein UNDEAD -0.61 0.32 -0.32
110 AT5G58003 C-terminal domain phosphatase-like 4 C-terminal domain phosphatase-like
4		 0.61 0.32 -0.31
111 AT5G53250 arabinogalactan protein 22 arabinogalactan protein 22,
ARABINOGALACTAN PROTEIN 22		 -0.61 0.3 -0.32
112 AT3G49190 O-acyltransferase (WSD1-like) family protein -0.61 0.31 -0.34
113 AT2G03090 expansin A15 ATEXP15, expansin A15, ATHEXP
ALPHA 1.3, EXPANSIN 15, expansin
A15		 -0.61 0.33 -0.33
114 AT1G14960 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.61 0.3 -0.33
115 AT1G46264 heat shock transcription factor B4 AT-HSFB4, heat shock transcription
factor B4, SCHIZORIZA		 -0.61 0.31 -0.32
116 AT2G18350 homeobox protein 24 homeobox protein 24, homeobox
protein 24, ZINC FINGER
HOMEODOMAIN 6		 0.61 0.31 -0.3
117 AT3G59370 Vacuolar calcium-binding protein-related -0.61 0.32 -0.32
118 AT1G21610 wound-responsive family protein 0.61 0.33 -0.31
119 AT1G71870 MATE efflux family protein -0.61 0.33 -0.32
120 AT1G23160 Auxin-responsive GH3 family protein -0.61 0.31 -0.34
121 AT4G05200 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 cysteine-rich RLK (RECEPTOR-like
protein kinase) 25		 -0.61 0.33 -0.32
122 AT5G50020 DHHC-type zinc finger family protein 0.61 0.31 -0.31
123 AT4G03510 RING membrane-anchor 1 ATRMA1, RING membrane-anchor 1 0.61 0.33 -0.34
124 AT4G26500 chloroplast sulfur E ARABIDOPSIS THALIANA SULFUR E,
chloroplast sulfur E, MBRYO
DEFECTIVE 1374, SULFUR E 1		 0.61 0.32 -0.33
125 AT1G18610 Galactose oxidase/kelch repeat superfamily protein -0.61 0.33 -0.31
126 AT1G34670 myb domain protein 93 myb domain protein 93, myb domain
protein 93		 -0.61 0.29 -0.32
127 AT1G49960 Xanthine/uracil permease family protein -0.61 0.3 -0.32
128 AT5G26960 Galactose oxidase/kelch repeat superfamily protein 0.61 0.33 -0.31
129 AT3G53410 RING/U-box superfamily protein 0.6 0.3 -0.3
130 AT4G14390 Ankyrin repeat family protein -0.6 0.32 -0.33
131 AT4G23110 insulin-like growth factor binding -0.6 0.33 -0.29
132 AT1G10400 UDP-Glycosyltransferase superfamily protein -0.6 0.31 -0.31
133 AT5G60850 OBF binding protein 4 OBF binding protein 4 0.6 0.33 -0.32
134 AT2G21650 Homeodomain-like superfamily protein ARABIDOPSIS RAD-LIKE 2, MATERNAL
EFFECT EMBRYO ARREST 3,
RADIALIS-LIKE SANT/MYB 1		 -0.6 0.34 -0.31
135 AT1G25580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 8, SUPPRESSOR OF GAMMA
RADIATION 1		 -0.6 0.31 -0.3
136 AT3G62080 SNF7 family protein 0.6 0.31 -0.33
137 AT1G34545 transposable element gene -0.6 0.33 -0.32
138 AT3G01070 early nodulin-like protein 16 AtENODL16, early nodulin-like
protein 16		 -0.6 0.31 -0.32
139 AT1G52150 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-15, ATHB15, CORONA, INCURVATA
4		 -0.6 0.31 -0.33
140 AT2G31900 myosin-like protein XIF MYOSIN 5, MYOSIN XI F, myosin-like
protein XIF		 -0.6 0.33 -0.31
141 AT4G38390 root hair specific 17 root hair specific 17 -0.6 0.31 -0.32
142 AT5G27680 RECQ helicase SIM RECQ helicase SIM -0.6 0.31 -0.31
143 AT3G50500 SNF1-related protein kinase 2.2 SNF1-RELATED PROTEIN KINASE 2-2,
SNF1-related protein kinase 2.2,
SNF1-RELATED PROTEIN KINASE 2-2,
SRK2D		 0.6 0.32 -0.33
144 AT5G56540 arabinogalactan protein 14 arabinogalactan protein 14,
ATAGP14		 -0.6 0.32 -0.31
145 AT5G13180 NAC domain containing protein 83 NAC domain containing protein 83,
NAC domain containing protein 83,
VND-interacting 2		 0.6 0.33 -0.31
146 AT2G32300 uclacyanin 1 uclacyanin 1 -0.6 0.31 -0.3
147 AT1G11970 Ubiquitin-like superfamily protein 0.6 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
148 C0178 MST_2446.7 - - - 0.71 0.43 -0.47