AT3G47460 : ATSMC2
Query Information
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AGICode AT3G47460
Description Structural maintenance of chromosomes (SMC) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G47460 Structural maintenance of chromosomes (SMC) family protein ATSMC2 1 0.3 -0.32
2 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 -0.72 0.33 -0.32
3 AT3G48480 Cysteine proteinases superfamily protein 0.71 0.31 -0.32
4 AT1G01740 Protein kinase protein with tetratricopeptide repeat domain 0.7 0.33 -0.32
5 AT5G40360 myb domain protein 115 myb domain protein 115, myb domain
protein 115		 0.69 0.32 -0.3
6 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 0.69 0.3 -0.29
7 AT3G48900 single-stranded DNA endonuclease family protein 0.69 0.34 -0.32
8 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 0.68 0.33 -0.32
9 AT5G57320 villin, putative villin 5 0.68 0.3 -0.34
10 AT4G16120 COBRA-like protein-7 precursor ARABIDOPSIS THALIANA SEC61 BETA 1,
COBRA-like protein-7 precursor,
SEC61 BETA 1		 0.68 0.31 -0.32
11 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.31
12 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.68 0.32 -0.32
13 AT4G13420 high affinity K+ transporter 5 ARABIDOPSIS THALIANA HIGH AFFINITY
K+ TRANSPORTER 5, high affinity K+
transporter 5		 0.67 0.28 -0.32
14 AT4G39090 Papain family cysteine protease RESPONSIVE TO DEHYDRATION 19,
RESPONSIVE TO DEHYDRATION 19A		 -0.67 0.3 -0.32
15 AT1G19230 Riboflavin synthase-like superfamily protein -0.67 0.33 -0.32
16 AT2G42990 GDSL-like Lipase/Acylhydrolase superfamily protein 0.67 0.29 -0.32
17 AT4G02460 DNA mismatch repair protein, putative POSTMEIOTIC SEGREGATION 1 0.67 0.32 -0.31
18 AT3G17360 phragmoplast orienting kinesin 1 phragmoplast orienting kinesin 1 0.66 0.28 -0.34
19 AT1G79220 Mitochondrial transcription termination factor family
protein		 0.66 0.32 -0.31
20 AT3G57700 Protein kinase superfamily protein -0.66 0.33 -0.29
21 AT3G55830 Nucleotide-diphospho-sugar transferases superfamily protein ECTOPICALLY PARTING CELLS -0.65 0.34 -0.3
22 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.65 0.3 -0.31
23 AT1G30970 zinc finger (C2H2 type) family protein suppressor of FRIGIDA4 0.65 0.3 -0.31
24 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.65 0.33 -0.31
25 AT4G23950 Galactose-binding protein 0.65 0.32 -0.3
26 AT5G07700 myb domain protein 76 myb domain protein 76, myb domain
protein 76		 0.65 0.32 -0.31
27 AT5G34800 transposable element gene 0.65 0.33 -0.3
28 AT2G18640 geranylgeranyl pyrophosphate synthase 4 geranylgeranyl pyrophosphate
synthase 4		 -0.64 0.31 -0.31
29 AT2G33690 Late embryogenesis abundant protein, group 6 0.64 0.33 -0.33
30 AT3G21410 F-box and associated interaction domains-containing protein 0.63 0.33 -0.32
31 AT3G47230 transposable element gene -0.63 0.29 -0.32
32 AT2G19000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 71 Blast hits to
71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.32 -0.32
33 AT1G27880 DEAD/DEAH box RNA helicase family protein 0.63 0.3 -0.31
34 AT4G36150 Disease resistance protein (TIR-NBS-LRR class) family -0.62 0.34 -0.32
35 AT5G47970 Aldolase-type TIM barrel family protein 0.62 0.31 -0.32
36 AT1G73660 protein tyrosine kinase family protein 0.62 0.3 -0.32
37 AT1G63640 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.62 0.32 -0.32
38 AT5G52690 Copper transport protein family -0.61 0.32 -0.31
39 AT3G20770 Ethylene insensitive 3 family protein AtEIN3, ETHYLENE-INSENSITIVE3 -0.61 0.3 -0.32
40 AT3G45670 Protein kinase superfamily protein 0.61 0.31 -0.31
41 AT1G64280 regulatory protein (NPR1) ARABIDOPSIS NONEXPRESSER OF PR
GENES 1, NON-INDUCIBLE IMMUNITY 1,
NONEXPRESSER OF PR GENES 1,
SALICYLIC ACID INSENSITIVE 1		 -0.61 0.29 -0.32
42 AT2G44480 beta glucosidase 17 beta glucosidase 17 -0.61 0.32 -0.32
43 AT1G76420 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 31, CUP SHAPED COTYLEDON3,
NAC368		 0.61 0.31 -0.32
44 AT2G41410 Calcium-binding EF-hand family protein -0.61 0.32 -0.32
45 AT2G26350 peroxin 10 ATPEX10, peroxin 10 0.61 0.31 -0.32
46 AT5G45300 beta-amylase 2 BETA-AMYLASE 8, beta-amylase 2 0.61 0.3 -0.31
47 AT5G19600 sulfate transporter 3;5 sulfate transporter 3;5 0.61 0.32 -0.29
48 AT1G06470 Nucleotide/sugar transporter family protein 0.61 0.32 -0.31
49 AT2G20150 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.33 -0.3
50 AT5G59190 subtilase family protein 0.6 0.31 -0.3
51 AT1G38340 transposable element gene 0.6 0.32 -0.33
52 AT1G73380 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1308 (InterPro:IPR010733); Has 162
Blast hits to 160 proteins in 67 species: Archae - 0;
Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 -0.6 0.31 -0.29
53 AT2G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function DUF2359, transmembrane
(TAIR:AT1G23170.2); Has 27 Blast hits to 27 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.31 -0.32
54 AT4G19470 Leucine-rich repeat (LRR) family protein 0.6 0.3 -0.32
55 AT5G16610 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.6 0.3 -0.3
56 AT2G07630 transposable element gene 0.59 0.3 -0.31
57 AT5G60690 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 INTERFASCICULAR FIBERLESS,
INTERFASCICULAR FIBERLESS 1,
REVOLUTA		 0.59 0.29 -0.32
58 AT5G67100 DNA-directed DNA polymerases INCURVATA2 0.59 0.31 -0.32
59 AT5G65140 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
J		 -0.59 0.31 -0.32
60 AT5G09570 Cox19-like CHCH family protein -0.59 0.33 -0.28
61 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.32 -0.32
62 AT1G42570 pseudogene, similar to P0529E05.9, blastp match of 56%
identity and 1.2e-110 P-value to
GP|18461196|dbj|BAB84393.1||AP003279 P0529E05.9 {Oryza
sativa (japonica cultivar-group)}		 0.59 0.28 -0.33
63 AT3G49250 defective in meristem silencing 3 DEFECTIVE IN MERISTEM SILENCING 3,
INVOLVED IN DE NOVO 1		 0.59 0.3 -0.31
64 AT5G02570 Histone superfamily protein 0.59 0.32 -0.32
65 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 0.58 0.33 -0.33
66 AT1G71490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.31 -0.3
67 AT2G13750 transposable element gene 0.58 0.3 -0.31
68 AT1G63200 Cystatin/monellin superfamily protein 0.58 0.32 -0.33
69 AT2G23740 nucleic acid binding;sequence-specific DNA binding
transcription factors;zinc ion binding		 0.58 0.34 -0.32
70 AT1G27370 squamosa promoter binding protein-like 10 squamosa promoter binding
protein-like 10		 0.58 0.31 -0.32
71 AT4G38120 ARM repeat superfamily protein 0.58 0.32 -0.32
72 AT3G47590 alpha/beta-Hydrolases superfamily protein -0.57 0.31 -0.31
73 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.57 0.32 -0.31
74 AT1G44060 transposable element gene -0.57 0.32 -0.32
75 AT1G41797 transposable element gene -0.57 0.32 -0.31
76 AT3G02670 Glycine-rich protein family -0.56 0.3 -0.3
77 AT3G24050 GATA transcription factor 1 GATA transcription factor 1 -0.56 0.33 -0.31
78 AT2G31700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
79 C0160 MST_1509.5 - - - -0.64 0.45 -0.46