AT3G47640 : POPEYE
Query Information
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AGICode AT3G47640
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G47640 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 POPEYE 1 0.3 -0.3
2 AT1G23020 ferric reduction oxidase 3 FERRIC REDUCTION OXIDASE 3, ferric
reduction oxidase 3		 0.88 0.32 -0.31
3 AT2G42750 DNAJ heat shock N-terminal domain-containing protein 0.88 0.31 -0.32
4 AT3G18290 zinc finger protein-related BRUTUS, embryo defective 2454 0.88 0.29 -0.31
5 AT3G56980 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH039, OBP3-RESPONSIVE GENE 3 0.88 0.31 -0.34
6 AT5G53450 OBP3-responsive gene 1 OBP3-responsive gene 1 0.87 0.3 -0.31
7 AT1G47400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits
to 11 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.85 0.31 -0.29
8 AT5G67330 natural resistance associated macrophage protein 4 ARABIDOPSIS THALIANA NATURAL
RESISTANCE ASSOCIATED MACROPHAGE
PROTEIN 4, natural resistance
associated macrophage protein 4		 0.85 0.3 -0.33
9 AT1G48300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87
proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa -
12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink).		 0.85 0.32 -0.32
10 AT5G67370 Protein of unknown function (DUF1230) 0.84 0.33 -0.3
11 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 0.83 0.3 -0.33
12 AT5G04150 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH101 0.83 0.32 -0.32
13 AT1G64980 Nucleotide-diphospho-sugar transferases superfamily protein 0.83 0.28 -0.33
14 AT4G16370 oligopeptide transporter oligopeptide transporter, OPT3,
oligopeptide transporter		 0.82 0.31 -0.34
15 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.78 0.31 -0.32
16 AT5G01600 ferretin 1 ARABIDOPSIS THALIANA FERRETIN 1,
ferretin 1		 -0.76 0.3 -0.34
17 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.33 -0.31
18 AT3G17950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.75 0.32 -0.31
19 AT4G24130 Protein of unknown function, DUF538 -0.74 0.32 -0.31
20 AT5G08520 Duplicated homeodomain-like superfamily protein 0.73 0.33 -0.3
21 AT4G08390 stromal ascorbate peroxidase stromal ascorbate peroxidase -0.73 0.3 -0.33
22 AT1G68650 Uncharacterized protein family (UPF0016) -0.73 0.33 -0.32
23 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.32 -0.31
24 AT1G14780 MAC/Perforin domain-containing protein -0.71 0.29 -0.31
25 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.71 0.33 -0.31
26 AT3G18295 Protein of unknown function (DUF1639) 0.71 0.3 -0.31
27 AT1G55915 zinc ion binding -0.7 0.32 -0.3
28 AT5G59400 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
PGR5-like B (TAIR:AT4G11960.1); Has 97 Blast hits to 97
proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.7 0.33 -0.32
29 AT1G03470 Kinase interacting (KIP1-like) family protein 0.7 0.3 -0.31
30 AT3G17770 Dihydroxyacetone kinase 0.7 0.33 -0.3
31 AT4G13830 DNAJ-like 20 DNAJ-like 20 0.69 0.3 -0.31
32 AT2G36885 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to
172 proteins in 58 species: Archae - 0; Bacteria - 116;
Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 24 (source: NCBI BLink).		 -0.69 0.33 -0.31
33 AT5G15550 Transducin/WD40 repeat-like superfamily protein -0.69 0.29 -0.34
34 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.3 -0.33
35 AT1G19000 Homeodomain-like superfamily protein 0.68 0.3 -0.31
36 AT3G11050 ferritin 2 ferritin 2, ferritin 2 -0.68 0.3 -0.31
37 AT3G01350 Major facilitator superfamily protein 0.68 0.3 -0.29
38 AT1G12030 Protein of unknown function (DUF506) 0.68 0.32 -0.3
39 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 -0.68 0.32 -0.29
40 AT3G62270 HCO3- transporter family -0.68 0.3 -0.32
41 AT1G78340 glutathione S-transferase TAU 22 glutathione S-transferase TAU 22,
glutathione S-transferase TAU 22		 -0.68 0.31 -0.32
42 AT3G59220 pirin ATPIRIN1, pirin, PRN1 -0.68 0.31 -0.3
43 AT3G02570 Mannose-6-phosphate isomerase, type I MATERNAL EFFECT EMBRYO ARREST 31,
PHOSPHOMANNOSE ISOMERASE 1		 0.68 0.32 -0.31
44 AT1G22710 sucrose-proton symporter 2 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 2,
sucrose-proton symporter 2,
SUCROSE TRANSPORTER 1		 0.68 0.31 -0.3
45 AT3G20510 Transmembrane proteins 14C -0.67 0.34 -0.31
46 AT1G06060 LisH and RanBPM domains containing protein 0.67 0.34 -0.31
47 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.67 0.3 -0.29
48 AT2G15695 Protein of unknown function DUF829, transmembrane 53 0.67 0.31 -0.31
49 AT3G49160 pyruvate kinase family protein -0.67 0.31 -0.28
50 AT1G79870 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 0.66 0.32 -0.32
51 AT5G25820 Exostosin family protein -0.66 0.32 -0.32
52 AT5G27330 Prefoldin chaperone subunit family protein -0.66 0.31 -0.32
53 AT2G18900 Transducin/WD40 repeat-like superfamily protein -0.66 0.31 -0.31
54 AT3G22660 rRNA processing protein-related -0.66 0.32 -0.31
55 AT4G04770 ATP binding cassette protein 1 ATP binding cassette protein 1,
ATP-binding cassette I8, ATP
binding cassette protein 1,
ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMBLY PROTEIN 1, LONG AFTER FR		 -0.66 0.29 -0.32
56 AT5G49970 pyridoxin (pyrodoxamine) 5'-phosphate oxidase pyridoxin (pyrodoxamine)
5'-phosphate oxidase, HOMOLOG OF
YEAST PYRIDOXINE AUXOTROPHY 3,
pyridoxin (pyrodoxamine)
5'-phosphate oxidase		 0.66 0.29 -0.31
57 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.66 0.33 -0.32
58 AT1G29940 nuclear RNA polymerase A2 nuclear RNA polymerase A2 -0.66 0.3 -0.3
59 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.66 0.32 -0.31
60 AT5G02560 histone H2A 12 histone H2A 12 0.65 0.32 -0.32
61 AT3G50750 BES1/BZR1 homolog 1 BES1/BZR1 homolog 1 0.65 0.32 -0.32
62 AT1G70210 CYCLIN D1;1 ATCYCD1;1, CYCLIN D1;1 0.65 0.31 -0.31
63 AT2G27510 ferredoxin 3 ferredoxin 3, ferredoxin 3 -0.64 0.32 -0.31
64 AT4G36050 endonuclease/exonuclease/phosphatase family protein -0.64 0.32 -0.3
65 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 -0.64 0.31 -0.31
66 AT5G57250 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.31 -0.33
67 AT1G79470 Aldolase-type TIM barrel family protein -0.64 0.32 -0.31
68 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 -0.64 0.31 -0.31
69 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2		 -0.64 0.34 -0.32
70 AT2G40300 ferritin 4 ferritin 4, ferritin 4 -0.64 0.33 -0.3
71 AT1G27210 ARM repeat superfamily protein 0.63 0.32 -0.31
72 AT1G61570 translocase of the inner mitochondrial membrane 13 translocase of the inner
mitochondrial membrane 13		 -0.63 0.33 -0.3
73 AT5G54530 Protein of unknown function, DUF538 0.63 0.31 -0.32
74 AT2G46850 Protein kinase superfamily protein -0.63 0.31 -0.31
75 AT4G36700 RmlC-like cupins superfamily protein 0.63 0.32 -0.31
76 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 -0.63 0.31 -0.31
77 AT1G27690 Protein of unknown function (DUF620) 0.63 0.31 -0.31
78 AT3G52140 tetratricopeptide repeat (TPR)-containing protein -0.63 0.32 -0.3
79 AT1G53060 Legume lectin family protein 0.63 0.31 -0.31
80 AT5G13680 IKI3 family protein ABA-OVERLY SENSITIVE 1, AtELP1,
ELONGATA 2		 -0.63 0.31 -0.31
81 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 -0.62 0.33 -0.31
82 AT3G08040 MATE efflux family protein ATFRD3, FERRIC REDUCTASE DEFECTIVE
3, MANGANESE ACCUMULATOR 1		 -0.62 0.33 -0.31
83 AT1G17430 alpha/beta-Hydrolases superfamily protein -0.62 0.33 -0.31
84 AT4G28240 Wound-responsive family protein 0.62 0.32 -0.3
85 AT5G19280 kinase associated protein phosphatase kinase associated protein
phosphatase, ROOT ATTENUATED
GROWTH 1		 -0.62 0.31 -0.3
86 AT5G43830 Aluminium induced protein with YGL and LRDR motifs 0.62 0.29 -0.32
87 AT5G64880 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.62 0.32 -0.3
88 AT5G09840 Putative endonuclease or glycosyl hydrolase -0.62 0.32 -0.31
89 AT4G24120 YELLOW STRIPE like 1 YELLOW STRIPE LIKE 1, YELLOW
STRIPE like 1		 -0.62 0.32 -0.3
90 AT3G18035 winged-helix DNA-binding transcription factor family
protein		 HON4 0.62 0.33 -0.32
91 AT2G42800 receptor like protein 29 receptor like protein 29, receptor
like protein 29		 0.62 0.31 -0.3
92 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO -0.61 0.32 -0.3
93 AT5G15700 DNA/RNA polymerases superfamily protein -0.61 0.31 -0.32
94 AT1G12230 Aldolase superfamily protein 0.61 0.36 -0.31
95 AT1G25350 glutamine-tRNA ligase, putative / glutaminyl-tRNA
synthetase, putative / GlnRS, putative		 ovule abortion 9 -0.61 0.32 -0.32
96 AT5G39860 basic helix-loop-helix (bHLH) DNA-binding family protein BASIC HELIX-LOOP-HELIX PROTEIN
136, BANQUO 1, PACLOBUTRAZOL
RESISTANCE1		 0.61 0.29 -0.31
97 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 0.61 0.29 -0.31
98 AT5G47390 myb-like transcription factor family protein 0.61 0.29 -0.31
99 AT3G19860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 121 0.61 0.32 -0.32
100 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 -0.61 0.31 -0.3
101 AT5G62610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.61 0.31 -0.3
102 AT2G46250 myosin heavy chain-related 0.61 0.31 -0.3
103 AT1G14570 UBX domain-containing protein 0.6 0.32 -0.32
104 AT1G26660 Prefoldin chaperone subunit family protein -0.6 0.33 -0.34
105 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.31 -0.33
106 AT1G21140 Vacuolar iron transporter (VIT) family protein -0.6 0.31 -0.32
107 AT3G02540 Rad23 UV excision repair protein family PUTATIVE DNA REPAIR PROTEIN
RAD23-3, RADIATION SENSITIVE23C		 0.6 0.33 -0.34
108 AT4G02440 F-box family protein EMPFINDLICHER IM DUNKELROTEN LICHT
1		 0.6 0.31 -0.3
109 AT2G41760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function WDYHV (InterPro:IPR019161); Has 201 Blast
hits to 201 proteins in 90 species: Archae - 0; Bacteria -
2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0;
Other Eukaryotes - 27 (source: NCBI BLink).		 0.6 0.34 -0.33
110 AT1G57870 shaggy-like kinase 42 shaggy-like kinase 42, shaggy-like
kinase 42		 0.6 0.32 -0.31
111 AT2G30540 Thioredoxin superfamily protein 0.6 0.32 -0.31
112 AT4G00900 ER-type Ca2+-ATPase 2 ARABIDOPSIS THALIANA ER-TYPE
CA2+-ATPASE 2, ER-type Ca2+-ATPase
2		 -0.59 0.32 -0.29
113 AT2G02850 plantacyanin plantacyanin -0.59 0.3 -0.3
114 AT5G17270 Protein prenylyltransferase superfamily protein -0.59 0.33 -0.34
115 AT1G45616 receptor like protein 6 receptor like protein 6, receptor
like protein 6		 -0.59 0.34 -0.31
116 AT2G38280 AMP deaminase, putative / myoadenylate deaminase, putative ADENOSINE 5'-MONOPHOSPHATE
DEAMINASE, EMBRYONIC FACTOR1		 -0.59 0.32 -0.32
117 AT1G55610 BRI1 like BRI1 like -0.59 0.32 -0.34
118 AT1G21310 extensin 3 extensin 3, extensin 3,
ROOT-SHOOT-HYPOCOTYL DEFECTIVE		 -0.59 0.31 -0.31
119 AT2G32280 Protein of unknown function (DUF1218) -0.59 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
120 C0167 MST_1744.8 - - - 0.87 0.46 -0.49
121 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.68 0.45 -0.49 C0088
122 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.68 0.45 -0.46
123 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		0.67 0.47 -0.51 C0261
124 C0159 MST_1505.6 - - - 0.66 0.43 -0.44