AT3G47660 : -
Query Information
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AGICode AT3G47660
Description Regulator of chromosome condensation (RCC1) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G47660 Regulator of chromosome condensation (RCC1) family protein 1 0.32 -0.32
2 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 -0.7 0.31 -0.31
3 AT4G33390 Plant protein of unknown function (DUF827) 0.69 0.31 -0.3
4 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 -0.67 0.31 -0.32
5 AT2G45930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G16090.1); Has 161 Blast hits to
161 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.32 -0.3
6 AT1G49560 Homeodomain-like superfamily protein 0.66 0.29 -0.32
7 AT5G49945 Protein of unknown function (DUF1682) 0.66 0.31 -0.33
8 AT1G35970 transposable element gene -0.66 0.33 -0.3
9 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.34 -0.32
10 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.32 -0.32
11 AT2G33680 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.35 -0.29
12 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 -0.64 0.33 -0.32
13 AT2G18640 geranylgeranyl pyrophosphate synthase 4 geranylgeranyl pyrophosphate
synthase 4		 0.64 0.32 -0.31
14 AT1G04700 PB1 domain-containing protein tyrosine kinase 0.64 0.32 -0.3
15 AT1G36910 transposable element gene 0.64 0.31 -0.31
16 AT4G22620 SAUR-like auxin-responsive protein family 0.64 0.33 -0.31
17 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.32 -0.31
18 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 -0.63 0.32 -0.31
19 AT1G13130 Cellulase (glycosyl hydrolase family 5) protein 0.63 0.31 -0.33
20 AT1G54640 F-box family protein-related 0.62 0.31 -0.32
21 AT1G67000 Protein kinase superfamily protein -0.62 0.31 -0.33
22 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 0.62 0.31 -0.3
23 AT1G35663 transposable element gene 0.62 0.31 -0.3
24 AT1G76710 SET domain group 26 ASH1 RELATED PROTEIN 1,
ASH1-RELATED PROTEIN 1, SET domain
group 26		 -0.62 0.32 -0.3
25 AT3G29690 HXXXD-type acyl-transferase family protein 0.61 0.3 -0.32
26 AT3G04280 response regulator 22 response regulator 22, response
regulator 22		 0.61 0.32 -0.32
27 AT4G11730 Cation transporter/ E1-E2 ATPase family protein 0.61 0.3 -0.33
28 AT5G47250 LRR and NB-ARC domains-containing disease resistance
protein		 -0.61 0.31 -0.31
29 AT2G06500 hAT family dimerisation domain 0.61 0.33 -0.31
30 AT1G08270 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST
Arabidopsis thaliana protein match is: AAA-type ATPase
family protein (TAIR:AT2G27600.1); Has 1133 Blast hits to
1133 proteins in 252 species: Archae - 47; Bacteria - 0;
Metazoa - 540; Fungi - 145; Plants - 223; Viruses - 0;
Other Eukaryotes - 178 (source: NCBI BLink).		 -0.6 0.31 -0.28
31 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.6 0.31 -0.33
32 AT1G05360 BEST Arabidopsis thaliana protein match is: SNARE
associated Golgi protein family (TAIR:AT4G14950.1); Has 332
Blast hits to 326 proteins in 115 species: Archae - 0;
Bacteria - 11; Metazoa - 174; Fungi - 0; Plants - 74;
Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).		 Killing Me Slowly 2 -0.6 0.3 -0.32
33 AT3G03400 EF hand calcium-binding protein family 0.6 0.33 -0.33
34 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.6 0.31 -0.32
35 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 -0.6 0.33 -0.33
36 AT3G57210 Protein of unknown function (DUF626) 0.6 0.34 -0.3
37 AT3G28890 receptor like protein 43 receptor like protein 43, receptor
like protein 43		 -0.6 0.34 -0.33
38 AT5G07430 Pectin lyase-like superfamily protein 0.6 0.31 -0.32
39 AT3G58080 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.3
40 AT1G19485 Transducin/WD40 repeat-like superfamily protein -0.6 0.35 -0.31
41 AT1G54170 CTC-interacting domain 3 CTC-interacting domain 3 -0.6 0.31 -0.32
42 AT3G29600 transposable element gene 0.59 0.31 -0.33
43 AT2G41810 Protein of unknown function, DUF642 0.59 0.3 -0.31
44 AT5G06100 myb domain protein 33 ATMYB33, myb domain protein 33 -0.59 0.3 -0.31
45 AT5G05310 TLC ATP/ADP transporter -0.59 0.3 -0.33
46 AT2G20110 Tesmin/TSO1-like CXC domain-containing protein 0.59 0.3 -0.32
47 AT5G49310 importin alpha isoform 5 importin alpha isoform 5 0.59 0.33 -0.31
48 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}		 -0.59 0.31 -0.31
49 AT3G48480 Cysteine proteinases superfamily protein -0.59 0.33 -0.3
50 AT5G48390 Tetratricopeptide repeat (TPR)-like superfamily protein ATZIP4 0.59 0.31 -0.31
51 AT1G27520 Glycosyl hydrolase family 47 protein -0.59 0.34 -0.31
52 AT5G38960 RmlC-like cupins superfamily protein 0.59 0.3 -0.32
53 AT5G22720 F-box/RNI-like superfamily protein -0.59 0.34 -0.31
54 AT1G60530 Dynamin related protein 4A Dynamin related protein 4A -0.59 0.32 -0.29
55 AT4G24630 DHHC-type zinc finger family protein -0.58 0.31 -0.34
56 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.58 0.32 -0.33
57 AT2G22160 Cysteine proteinases superfamily protein -0.58 0.31 -0.29
58 AT4G09960 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 11, SEEDSTICK 0.58 0.3 -0.31
59 AT5G38140 nuclear factor Y, subunit C12 nuclear factor Y, subunit C12 -0.58 0.31 -0.31
60 AT1G22860 Vacuolar sorting protein 39 -0.57 0.3 -0.3
61 AT1G36150 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.57 0.3 -0.29
62 AT3G48030 hypoxia-responsive family protein / zinc finger (C3HC4-type
RING finger) family protein		 0.57 0.31 -0.31
63 AT1G80330 gibberellin 3-oxidase 4 ARABIDOPSIS THALIANA GIBBERELLIN
3-OXIDASE 4, gibberellin 3-oxidase
4		 -0.57 0.3 -0.3
64 AT4G23580 Galactose oxidase/kelch repeat superfamily protein 0.57 0.32 -0.34
65 AT2G26350 peroxin 10 ATPEX10, peroxin 10 -0.57 0.32 -0.3
66 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 0.57 0.32 -0.33
67 AT1G19170 Pectin lyase-like superfamily protein -0.57 0.33 -0.32
68 AT3G16730 CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex,
subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to
211 proteins in 82 species: Archae - 0; Bacteria - 0;
Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 hypersensitive to excess boron 2 0.57 0.32 -0.32
69 AT1G47885 Ribonuclease inhibitor -0.57 0.3 -0.31
70 AT3G47230 transposable element gene 0.56 0.3 -0.31
71 AT5G59260 Concanavalin A-like lectin protein kinase family protein 0.56 0.31 -0.32
72 AT1G72060 serine-type endopeptidase inhibitors 0.56 0.34 -0.32
73 AT2G39520 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.32 -0.33
74 AT1G65670 cytochrome P450, family 702, subfamily A, polypeptide 1 cytochrome P450, family 702,
subfamily A, polypeptide 1		 -0.56 0.29 -0.3
75 AT5G15725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.56 0.31 -0.31
76 AT1G58330 transcription factor-related ZW2 0.56 0.29 -0.33
77 AT3G45990 Cofilin/tropomyosin-type actin-binding protein family 0.56 0.32 -0.32
78 AT2G11270 citrate synthase-related -0.56 0.33 -0.31
79 AT3G03360 F-box/RNI-like superfamily protein -0.56 0.32 -0.31
80 AT1G51910 Leucine-rich repeat protein kinase family protein 0.56 0.29 -0.34
81 AT1G01740 Protein kinase protein with tetratricopeptide repeat domain -0.56 0.31 -0.3
82 AT2G43270 F-box and associated interaction domains-containing protein 0.56 0.32 -0.33
83 AT3G55020 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.56 0.32 -0.31
84 AT1G75940 Glycosyl hydrolase superfamily protein ATA27, BETA GLUCOSIDASE 20 0.55 0.31 -0.32
85 AT2G05960 transposable element gene 0.55 0.32 -0.31
86 AT1G61420 S-locus lectin protein kinase family protein -0.55 0.29 -0.34
87 AT2G14380 transposable element gene 0.55 0.3 -0.33
88 AT5G26610 D111/G-patch domain-containing protein -0.55 0.32 -0.32
89 AT2G30430 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.32 -0.29
90 AT3G23040 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.34 -0.34
91 AT5G09690 magnesium transporter 7 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORTER 7, magnesium
transporter 7, MRS2-7		 -0.55 0.28 -0.3
92 AT2G36740 sequence-specific DNA binding transcription factors;DNA
binding;DNA binding		 ATSWC2, SWC2 -0.55 0.3 -0.32
93 AT5G44700 Leucine-rich repeat transmembrane protein kinase EMBRYO SAC DEVELOPMENT ARREST 23,
GASSHO 2		 0.54 0.32 -0.32
94 AT1G24390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.3 -0.31
95 AT3G27980 Plant invertase/pectin methylesterase inhibitor superfamily 0.54 0.3 -0.32
96 AT3G09660 minichromosome maintenance 8 minichromosome maintenance 8 -0.54 0.32 -0.3
97 AT1G53390 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette G24 -0.54 0.31 -0.31
98 AT3G25420 serine carboxypeptidase-like 21 serine carboxypeptidase-like 21 0.54 0.3 -0.32
99 AT4G04510 cysteine-rich RLK (RECEPTOR-like protein kinase) 38 cysteine-rich RLK (RECEPTOR-like
protein kinase) 38		 0.54 0.32 -0.31
100 AT3G18350 Plant protein of unknown function (DUF639) -0.54 0.34 -0.3
101 AT5G19710 BEST Arabidopsis thaliana protein match is: HPT
phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.54 0.33 -0.29
102 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 0.54 0.33 -0.3
103 AT1G34150 Pseudouridine synthase family protein -0.53 0.32 -0.36
104 AT2G47830 Cation efflux family protein -0.53 0.34 -0.31
105 AT2G20970 unknown protein; Has 204 Blast hits to 188 proteins in 80
species: Archae - 7; Bacteria - 37; Metazoa - 56; Fungi -
18; Plants - 9; Viruses - 2; Other Eukaryotes - 75 (source:
NCBI BLink).		 0.53 0.3 -0.29
106 AT5G01980 RING/U-box superfamily protein 0.53 0.3 -0.33
107 AT1G08250 arogenate dehydratase 6 arogenate dehydratase 6,
Arabidopsis thaliana arogenate
dehydratase 6		 -0.53 0.32 -0.31
108 AT4G17160 RAB GTPase homolog B1A ATRAB2B, RAB GTPase homolog B1A,
RAB GTPase homolog B1A		 0.53 0.3 -0.3
109 AT3G29640 transposable element gene 0.53 0.32 -0.3
110 AT3G16220 Predicted eukaryotic LigT -0.52 0.29 -0.33
111 AT1G33580 transposable element gene -0.52 0.32 -0.32
112 AT5G05980 DHFS-FPGS homolog B DHFS-FPGS homolog B, DHFS-FPGS
homolog B, folylpolyglutamate
synthetase 1		 -0.52 0.31 -0.31
113 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein -0.51 0.33 -0.32
114 AT1G06540 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G30930.1); Has 16 Blast hits
to 16 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.51 0.31 -0.29
115 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 -0.51 0.33 -0.31
116 AT1G61720 NAD(P)-binding Rossmann-fold superfamily protein BANYULS -0.51 0.29 -0.32
117 AT5G56900 CwfJ-like family protein / zinc finger (CCCH-type) family
protein		 -0.51 0.31 -0.28
118 AT3G48770 DNA binding;ATP binding -0.51 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
119 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.59 0.42 -0.47 C0091