AT3G46600 : -
Query Information
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AGICode AT3G46600
Description GRAS family transcription factor
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G46600 GRAS family transcription factor 1 0.32 -0.34
2 AT5G47230 ethylene responsive element binding factor 5 ETHYLENE RESPONSIVE ELEMENT
BINDING FACTOR- 5, ETHYLENE
RESPONSIVE ELEMENT BINDING FACTOR
5, ethylene responsive element
binding factor 5		 0.89 0.32 -0.3
3 AT3G15210 ethylene responsive element binding factor 4 ETHYLENE RESPONSIVE ELEMENT
BINDING FACTOR 4, ETHYLENE
RESPONSIVE ELEMENT BINDING FACTOR
4, ethylene responsive element
binding factor 4, RELATED TO AP2 5		 0.84 0.31 -0.33
4 AT4G17490 ethylene responsive element binding factor 6 ethylene responsive element
binding factor 6, ERF-6-6,
ethylene responsive element
binding factor 6		 0.84 0.32 -0.31
5 AT5G59550 zinc finger (C3HC4-type RING finger) family protein 0.84 0.32 -0.3
6 AT1G23710 Protein of unknown function (DUF1645) 0.83 0.32 -0.32
7 AT2G40140 zinc finger (CCCH-type) family protein ATSZF2, CZF1, (SALT-INDUCIBLE ZINC
FINGER 2, ZFAR1		 0.83 0.29 -0.34
8 AT3G15530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.83 0.34 -0.3
9 AT3G10930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 9 growth stages; Has 1 Blast hits to 1 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.31 -0.31
10 AT4G24570 dicarboxylate carrier 2 dicarboxylate carrier 2 0.82 0.31 -0.33
11 AT3G16720 TOXICOS EN LEVADURA 2 TOXICOS EN LEVADURA 2, TOXICOS EN
LEVADURA 2		 0.82 0.31 -0.31
12 AT3G55980 salt-inducible zinc finger 1 ATSZF1, salt-inducible zinc finger
1		 0.81 0.31 -0.32
13 AT2G40000 ortholog of sugar beet HS1 PRO-1 2 ARABIDOPSIS ORTHOLOG OF SUGAR BEET
HS1 PRO-1 2, ortholog of sugar
beet HS1 PRO-1 2		 0.8 0.31 -0.33
14 AT3G02840 ARM repeat superfamily protein 0.8 0.31 -0.33
15 AT1G80840 WRKY DNA-binding protein 40 ATWRKY40, WRKY DNA-binding protein
40		 0.8 0.35 -0.3
16 AT3G44260 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 CCR4- associated factor 1a, CCR4-
associated factor 1a		 0.8 0.32 -0.32
17 AT5G37770 EF hand calcium-binding protein family CALMODULIN-LIKE 24, TOUCH 2 0.79 0.32 -0.32
18 AT1G27730 salt tolerance zinc finger salt tolerance zinc finger, ZAT10 0.79 0.32 -0.32
19 AT4G27652 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G27657.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.79 0.32 -0.31
20 AT3G49530 NAC domain containing protein 62 NAC domain containing protein 62,
NAC domain containing protein 62,
NTM1 (NAC WITH TRANSMEMBRANE MOTIF
1)-LIKE 6		 0.79 0.31 -0.29
21 AT4G11280 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 1-aminocyclopropane-1-carboxylic
acid (acc) synthase 6, ATACS6		 0.78 0.33 -0.28
22 AT2G22880 VQ motif-containing protein 0.78 0.33 -0.28
23 AT4G37260 myb domain protein 73 ATMYB73, myb domain protein 73 0.78 0.31 -0.33
24 AT2G32030 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.78 0.33 -0.32
25 AT1G61340 F-box family protein 0.77 0.32 -0.32
26 AT3G25600 Calcium-binding EF-hand family protein 0.77 0.35 -0.31
27 AT4G29780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits
to 944 proteins in 87 species: Archae - 0; Bacteria - 0;
Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other
Eukaryotes - 18 (source: NCBI BLink).		 0.77 0.31 -0.31
28 AT4G27280 Calcium-binding EF-hand family protein 0.77 0.32 -0.31
29 AT1G19770 purine permease 14 purine permease 14, purine
permease 14		 0.77 0.3 -0.31
30 AT3G46620 zinc finger (C3HC4-type RING finger) family protein 0.77 0.31 -0.34
31 AT5G45340 cytochrome P450, family 707, subfamily A, polypeptide 3 cytochrome P450, family 707,
subfamily A, polypeptide 3		 0.77 0.32 -0.3
32 AT2G26190 calmodulin-binding family protein 0.76 0.32 -0.31
33 AT3G04640 glycine-rich protein 0.76 0.3 -0.29
34 AT1G15010 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits
to 71 proteins in 13 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.3 -0.33
35 AT2G38470 WRKY DNA-binding protein 33 WRKY DNA-BINDING PROTEIN 33, WRKY
DNA-binding protein 33		 0.76 0.32 -0.31
36 AT1G18740 Protein of unknown function (DUF793) 0.76 0.3 -0.32
37 AT1G72920 Toll-Interleukin-Resistance (TIR) domain family protein 0.75 0.3 -0.3
38 AT5G03555 permease, cytosine/purines, uracil, thiamine, allantoin
family protein		 -0.75 0.33 -0.31
39 AT3G52800 A20/AN1-like zinc finger family protein 0.75 0.3 -0.33
40 AT5G58430 exocyst subunit exo70 family protein B1 exocyst subunit exo70 family
protein B1, exocyst subunit exo70
family protein B1		 0.74 0.31 -0.31
41 AT3G19580 zinc-finger protein 2 zinc-finger protein 2, zinc-finger
protein 2		 0.74 0.35 -0.33
42 AT5G27420 carbon/nitrogen insensitive 1 ATL31, carbon/nitrogen insensitive
1		 0.74 0.33 -0.3
43 AT5G66210 calcium-dependent protein kinase 28 calcium-dependent protein kinase
28		 0.73 0.32 -0.32
44 AT3G56880 VQ motif-containing protein 0.73 0.3 -0.33
45 AT4G27657 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G54145.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.73 0.34 -0.33
46 AT5G51190 Integrase-type DNA-binding superfamily protein 0.73 0.33 -0.31
47 AT3G61190 BON association protein 1 BON association protein 1 0.73 0.32 -0.32
48 AT4G18880 heat shock transcription factor A4A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A4A, heat
shock transcription factor A4A		 0.73 0.3 -0.33
49 AT4G34150 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.72 0.3 -0.28
50 AT5G62020 heat shock transcription factor B2A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR B2A, heat
shock transcription factor B2A		 0.72 0.31 -0.31
51 AT1G28370 ERF domain protein 11 ERF DOMAIN PROTEIN 11, ERF domain
protein 11		 0.72 0.29 -0.33
52 AT1G74450 Protein of unknown function (DUF793) 0.72 0.32 -0.32
53 AT2G46400 WRKY DNA-binding protein 46 WRKY DNA-BINDING PROTEIN 46, WRKY
DNA-binding protein 46		 0.71 0.31 -0.32
54 AT2G33580 Protein kinase superfamily protein 0.71 0.31 -0.32
55 AT4G27654 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.71 0.31 -0.29
56 AT5G24590 TCV-interacting protein Arabidopsis NAC domain containing
protein 91, TCV-interacting
protein		 0.71 0.32 -0.29
57 AT5G61600 ethylene response factor 104 ethylene response factor 104 0.71 0.31 -0.33
58 AT1G48110 evolutionarily conserved C-terminal region 7 evolutionarily conserved
C-terminal region 7		 -0.7 0.32 -0.3
59 AT5G42380 calmodulin like 37 calmodulin like 37, CALMODULIN
LIKE 39		 0.7 0.31 -0.32
60 AT4G01250 WRKY family transcription factor AtWRKY22, WRKY22 0.7 0.29 -0.33
61 AT1G22190 Integrase-type DNA-binding superfamily protein related to AP2 4 0.7 0.32 -0.31
62 AT5G65300 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.7 0.31 -0.33
63 AT1G59590 ZCF37 ZCF37 0.7 0.32 -0.3
64 AT5G57560 Xyloglucan endotransglucosylase/hydrolase family protein Touch 4, xyloglucan
endotransglucosylase/hydrolase 22		 0.7 0.3 -0.33
65 AT3G23250 myb domain protein 15 MYB DOMAIN PROTEIN 15, ATY19, myb
domain protein 15		 0.69 0.31 -0.32
66 AT3G57530 calcium-dependent protein kinase 32 ATCPK32, CDPK32, calcium-dependent
protein kinase 32		 0.69 0.32 -0.32
67 AT2G25250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G32020.1); Has 30 Blast
hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.3 -0.29
68 AT1G73540 nudix hydrolase homolog 21 nudix hydrolase homolog 21, nudix
hydrolase homolog 21		 0.69 0.33 -0.31
69 AT1G12610 Integrase-type DNA-binding superfamily protein DWARF AND DELAYED FLOWERING 1 0.69 0.32 -0.31
70 AT5G54490 pinoid-binding protein 1 pinoid-binding protein 1 0.69 0.31 -0.33
71 AT1G35210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF740 (InterPro:IPR008004);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.68 0.31 -0.28
72 AT4G23640 Potassium transporter family protein ATKT3, KUP4, TINY ROOT HAIR 1 -0.68 0.29 -0.31
73 AT4G28400 Protein phosphatase 2C family protein 0.68 0.32 -0.3
74 AT1G19210 Integrase-type DNA-binding superfamily protein 0.68 0.32 -0.33
75 AT1G68720 tRNA arginine adenosine deaminase ARABIDOPSIS THALIANA TRNA
ADENOSINE DEAMINASE A, tRNA
arginine adenosine deaminase		 -0.67 0.32 -0.34
76 AT1G67530 ARM repeat superfamily protein 0.66 0.33 -0.33
77 AT2G41010 calmodulin (CAM)-binding protein of 25 kDa calmodulin (CAM)-binding protein
of 25 kDa, calmodulin
(CAM)-binding protein of 25 kDa		 0.66 0.32 -0.32
78 AT2G24550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits
to 219 proteins in 33 species: Archae - 0; Bacteria - 0;
Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 0.66 0.33 -0.31
79 AT3G50060 myb domain protein 77 myb domain protein 77 0.66 0.32 -0.33
80 AT1G33760 Integrase-type DNA-binding superfamily protein 0.66 0.32 -0.32
81 AT4G17250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits
to 31 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.31 -0.31
82 AT4G33985 Protein of unknown function (DUF1685) 0.66 0.31 -0.31
83 AT1G74930 Integrase-type DNA-binding superfamily protein ORA47 0.65 0.3 -0.33
84 AT1G50740 Transmembrane proteins 14C 0.65 0.32 -0.3
85 AT1G56070 Ribosomal protein S5/Elongation factor G/III/V family
protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 -0.65 0.29 -0.32
86 AT1G27100 Actin cross-linking protein 0.65 0.3 -0.35
87 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.64 0.3 -0.32
88 AT5G06000 eukaryotic translation initiation factor 3G2 ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITIATION FACTOR 3G2,
eukaryotic translation initiation
factor 3G2		 -0.63 0.3 -0.3
89 AT5G28220 Protein prenylyltransferase superfamily protein -0.63 0.32 -0.3
90 AT3G23210 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 34 -0.62 0.32 -0.31
91 AT2G20290 myosin-like protein XIG MYOSIN XI G, myosin-like protein
XIG		 -0.61 0.29 -0.32
92 AT1G31420 Leucine-rich repeat protein kinase family protein FEI 1 -0.61 0.31 -0.31
93 AT4G23490 Protein of unknown function (DUF604) -0.61 0.32 -0.3
94 AT2G36630 Sulfite exporter TauE/SafE family protein -0.61 0.35 -0.32
95 AT5G11560 catalytics -0.6 0.29 -0.31
96 AT1G60070 Adaptor protein complex AP-1, gamma subunit -0.59 0.31 -0.32
97 AT5G53140 Protein phosphatase 2C family protein -0.59 0.33 -0.32
98 AT2G47490 NAD+ transporter 1 ARABIDOPSIS THALIANA NAD+
TRANSPORTER 1, NAD+ transporter 1		 -0.59 0.33 -0.29
99 AT1G10130 endoplasmic reticulum-type calcium-transporting ATPase 3 ARABIDOPSIS THALIANA ER-TYPE
CA2+-ATPASE 3, endoplasmic
reticulum-type
calcium-transporting ATPase 3		 -0.58 0.33 -0.31
100 AT5G44780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G20020.2); Has 9661 Blast hits
to 6233 proteins in 635 species: Archae - 4; Bacteria -
1116; Metazoa - 4251; Fungi - 1510; Plants - 1359; Viruses
- 43; Other Eukaryotes - 1378 (source: NCBI BLink).		 -0.58 0.32 -0.32
101 AT5G20790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
petal differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G43110.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.57 0.31 -0.34
102 AT5G35160 Endomembrane protein 70 protein family -0.57 0.31 -0.3
103 AT5G64960 cyclin dependent kinase group C2 cyclin dependent kinase group C2,
Cyclin-dependent kinase C;2		 -0.57 0.35 -0.3
104 AT2G22125 binding cellulose synthase-interactive
protein 1, POM-POM 2		 -0.57 0.3 -0.31
105 AT1G31780 CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex
COG6 (InterPro:IPR010490); Has 384 Blast hits to 379
proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa
- 151; Fungi - 156; Plants - 42; Viruses - 0; Other
Eukaryotes - 31 (source: NCBI BLink).		 -0.57 0.34 -0.32
106 AT3G26850 histone-lysine N-methyltransferases -0.56 0.31 -0.32
107 AT5G19400 Telomerase activating protein Est1 SMG7 -0.56 0.31 -0.32
108 AT1G26790 Dof-type zinc finger DNA-binding family protein -0.56 0.3 -0.3
109 AT5G09850 Transcription elongation factor (TFIIS) family protein -0.54 0.31 -0.3
110 AT1G62350 Pentatricopeptide repeat (PPR) superfamily protein -0.54 0.31 -0.32
111 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 -0.53 0.32 -0.29
112 AT2G40400 Protein of unknown function (DUF399 and DUF3411) -0.53 0.33 -0.3
113 AT4G14240 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.53 0.3 -0.32
114 AT1G67930 Golgi transport complex protein-related -0.53 0.3 -0.31
115 AT4G02890 Ubiquitin family protein UBQ14 -0.53 0.33 -0.31
116 AT1G21660 Chaperone DnaJ-domain superfamily protein -0.53 0.35 -0.32
117 AT1G28090 Polynucleotide adenylyltransferase family protein -0.52 0.33 -0.31
118 AT1G01060 Homeodomain-like superfamily protein LATE ELONGATED HYPOCOTYL, LATE
ELONGATED HYPOCOTYL 1		 -0.52 0.31 -0.29
119 AT1G72420 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.52 0.32 -0.33
120 AT1G54270 eif4a-2 eif4a-2 -0.52 0.31 -0.31
121 AT2G17180 C2H2-like zinc finger protein DUO1-ACTIVATED ZINC FINGER 1 -0.52 0.32 -0.32
122 AT5G37310 Endomembrane protein 70 protein family -0.52 0.31 -0.3
123 AT5G41770 crooked neck protein, putative / cell cycle protein,
putative		 -0.51 0.33 -0.34
124 AT4G26510 uridine kinase-like 4 uridine kinase-like 4 -0.51 0.32 -0.28
125 AT1G49800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sepal, male gametophyte,
stamen; EXPRESSED DURING: 4 anthesis; Has 12 Blast hits to
12 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 -0.5 0.32 -0.32
126 AT2G20690 lumazine-binding family protein -0.5 0.31 -0.3
127 AT2G41451 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G57200.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.49 0.31 -0.31
128 AT4G02560 Homeodomain-like superfamily protein luminidependens -0.49 0.3 -0.28
129 AT5G15800 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 2, SEPALLATA1 -0.49 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0096 Gluconic acid - D-Gluconate - -0.58 0.47 -0.45 C0096