AT3G46440 : UDP-XYL synthase 5
Query Information
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AGICode AT3G46440
Description UDP-XYL synthase 5
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 1 0.32 -0.31
2 AT3G11560 LETM1-like protein -0.81 0.31 -0.32
3 AT1G17860 Kunitz family trypsin and protease inhibitor protein 0.81 0.3 -0.3
4 AT1G20870 HSP20-like chaperones superfamily protein -0.8 0.32 -0.33
5 AT2G35310 Transcriptional factor B3 family protein -0.77 0.32 -0.32
6 AT5G54500 flavodoxin-like quinone reductase 1 flavodoxin-like quinone reductase
1		 0.77 0.31 -0.32
7 ATCG00480 ATP synthase subunit beta ATP synthase subunit beta, ATP
synthase subunit beta		 -0.76 0.33 -0.32
8 AT3G54960 PDI-like 1-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 1, PDI-like
1-3, PROTEIN DISULFIDE ISOMERASE
1, PDI-like 1-3		 0.76 0.31 -0.33
9 AT3G09270 glutathione S-transferase TAU 8 glutathione S-transferase TAU 8,
glutathione S-transferase TAU 8		 0.75 0.31 -0.34
10 AT1G53210 sodium/calcium exchanger family protein / calcium-binding
EF hand family protein		 -0.75 0.33 -0.32
11 AT5G46880 homeobox-7 homeobox-7, HOMEODOMAIN GLABROUS 5 -0.75 0.34 -0.32
12 AT1G12330 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in
27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi -
14; Plants - 217; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.75 0.34 -0.33
13 ATCG00770 ribosomal protein S8 ribosomal protein S8 -0.75 0.32 -0.31
14 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 -0.75 0.32 -0.32
15 AT1G71810 Protein kinase superfamily protein -0.75 0.32 -0.3
16 AT5G07240 IQ-domain 24 IQ-domain 24 -0.75 0.32 -0.32
17 AT2G22980 serine carboxypeptidase-like 13 serine carboxypeptidase-like 13 -0.74 0.32 -0.31
18 AT1G65010 Plant protein of unknown function (DUF827) -0.74 0.31 -0.3
19 AT2G43880 Pectin lyase-like superfamily protein 0.74 0.34 -0.34
20 AT5G24000 Protein of unknown function (DUF819) -0.74 0.31 -0.29
21 AT3G51100 unknown protein; Has 48 Blast hits to 48 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.34 -0.33
22 AT1G15180 MATE efflux family protein -0.74 0.32 -0.3
23 AT2G37300 unknown protein; Has 93 Blast hits to 62 proteins in 29
species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi -
19; Plants - 25; Viruses - 0; Other Eukaryotes - 30
(source: NCBI BLink).		 ATP-binding cassette I16 -0.74 0.31 -0.32
24 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.74 0.3 -0.31
25 AT2G45620 Nucleotidyltransferase family protein -0.74 0.32 -0.31
26 ATCG00760 ribosomal protein L36 ribosomal protein L36 -0.73 0.32 -0.32
27 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 -0.73 0.32 -0.3
28 AT4G15110 cytochrome P450, family 97, subfamily B, polypeptide 3 cytochrome P450, family 97,
subfamily B, polypeptide 3		 -0.73 0.35 -0.32
29 AT3G17290 transposable element gene -0.72 0.32 -0.34
30 AT2G45150 cytidinediphosphate diacylglycerol synthase 4 cytidinediphosphate diacylglycerol
synthase 4		 -0.72 0.3 -0.3
31 AT3G01210 RNA-binding (RRM/RBD/RNP motifs) family protein -0.72 0.33 -0.32
32 AT5G46570 BR-signaling kinase 2 BR-signaling kinase 2 -0.72 0.31 -0.34
33 AT5G20480 EF-TU receptor EF-TU receptor 0.72 0.29 -0.31
34 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 0.72 0.31 -0.31
35 AT5G12150 Rho GTPase activation protein (RhoGAP) with PH domain -0.72 0.32 -0.32
36 ATCG00640 ribosomal protein L33 ribosomal protein L33 -0.72 0.3 -0.34
37 AT1G30610 pentatricopeptide (PPR) repeat-containing protein EMBRYO DEFECTIVE 2279, EMBRYO
DEFECTIVE 88		 -0.72 0.33 -0.33
38 AT2G36320 A20/AN1-like zinc finger family protein 0.71 0.31 -0.33
39 AT4G33500 Protein phosphatase 2C family protein -0.71 0.31 -0.31
40 AT1G18480 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtSLP2, Shewenella-like protein
phosphatase 2		 0.71 0.34 -0.3
41 AT1G75240 homeobox protein 33 homeobox protein 33, homeobox
protein 33, zinc-finger
homeodomain 5		 -0.71 0.33 -0.33
42 ATCG01040 Cytochrome C assembly protein YCF5 -0.71 0.31 -0.32
43 AT1G08220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
mitochondrial proton-transporting ATP synthase complex
assembly; LOCATED IN: mitochondrial inner membrane;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly
factor ATP10, mitochondria (InterPro:IPR007849); Has 168
Blast hits to 168 proteins in 86 species: Archae - 6;
Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30;
Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).		 0.71 0.29 -0.28
44 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.71 0.32 -0.32
45 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A -0.71 0.31 -0.32
46 AT4G25980 Peroxidase superfamily protein -0.71 0.36 -0.33
47 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.71 0.32 -0.33
48 AT4G30825 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.3 -0.31
49 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.71 0.31 -0.33
50 AT1G74160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits
to 2217 proteins in 314 species: Archae - 0; Bacteria -
264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses -
34; Other Eukaryotes - 1149 (source: NCBI BLink).		 -0.71 0.3 -0.33
51 AT4G39220 Rer1 family protein ATRER1A 0.71 0.32 -0.34
52 ATCG00630 PSAJ PSAJ -0.7 0.31 -0.3
53 AT3G04780 Protein of unknown function (DUF1000) 0.7 0.33 -0.31
54 AT3G61080 Protein kinase superfamily protein -0.7 0.33 -0.32
55 AT1G03070 Bax inhibitor-1 family protein -0.7 0.32 -0.31
56 ATCG00750 ribosomal protein S11 ribosomal protein S11 -0.7 0.29 -0.31
57 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in
59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi -
0; Plants - 134; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 -0.7 0.33 -0.32
58 AT1G12800 Nucleic acid-binding, OB-fold-like protein -0.7 0.31 -0.3
59 AT4G01800 Albino or Glassy Yellow 1 Albino or Glassy Yellow 1,
Arabidopsis thaliana chloroplast
SecA, SECA1		 -0.7 0.3 -0.32
60 AT2G48120 pale cress protein (PAC) PALE CRESS -0.7 0.33 -0.3
61 ATCG00650 ribosomal protein S18 ribosomal protein S18 -0.69 0.34 -0.3
62 AT2G39560 Putative membrane lipoprotein -0.69 0.3 -0.31
63 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 -0.69 0.32 -0.31
64 AT2G34140 Dof-type zinc finger DNA-binding family protein 0.69 0.33 -0.32
65 AT3G04340 FtsH extracellular protease family embryo defective 2458 -0.69 0.29 -0.33
66 AT5G33280 Voltage-gated chloride channel family protein -0.69 0.3 -0.31
67 ATCG00530 CemA-like proton extrusion protein-related YCF10 -0.69 0.32 -0.34
68 AT5G18110 novel cap-binding protein novel cap-binding protein 0.69 0.32 -0.33
69 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein -0.69 0.31 -0.31
70 AT1G71050 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 20		 -0.69 0.31 -0.31
71 AT1G27990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits
to 86 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.69 0.31 -0.31
72 AT2G20850 STRUBBELIG-receptor family 1 STRUBBELIG-receptor family 1 -0.69 0.31 -0.32
73 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 0.68 0.33 -0.31
74 AT4G23940 FtsH extracellular protease family -0.68 0.34 -0.31
75 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.68 0.33 -0.31
76 AT3G61830 auxin response factor 18 auxin response factor 18 -0.68 0.31 -0.33
77 AT5G51750 subtilase 1.3 subtilase 1.3, subtilase 1.3 -0.68 0.32 -0.31
78 AT1G54350 ABC transporter family protein ATP-binding cassette D2 -0.68 0.33 -0.3
79 AT5G58190 evolutionarily conserved C-terminal region 10 evolutionarily conserved
C-terminal region 10		 0.68 0.32 -0.29
80 AT1G49820 S-methyl-5-thioribose kinase S-methyl-5-thioribose kinase,
S-methyl-5-thioribose kinase,
5-methylthioribose kinase 1		 0.68 0.3 -0.3
81 AT1G01310 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.68 0.31 -0.31
82 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 0.67 0.31 -0.34
83 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 -0.67 0.31 -0.3
84 ATCG00800 structural constituent of ribosome -0.67 0.33 -0.31
85 AT5G13770 Pentatricopeptide repeat (PPR-like) superfamily protein -0.67 0.32 -0.31
86 AT3G01370 CRM family member 2 Arabidopsis thaliana CRM family
member 2, CRM family member 2		 -0.67 0.3 -0.32
87 AT1G22430 GroES-like zinc-binding dehydrogenase family protein -0.67 0.32 -0.33
88 AT4G11120 translation elongation factor Ts (EF-Ts), putative 0.67 0.31 -0.29
89 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.67 0.33 -0.32
90 AT1G05030 Major facilitator superfamily protein -0.67 0.31 -0.31
91 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 0.67 0.31 -0.32
92 AT3G57190 peptide chain release factor, putative peptide chain release factor 3 -0.67 0.3 -0.33
93 AT1G70100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24160.2); Has 3037 Blast hits
to 2309 proteins in 344 species: Archae - 6; Bacteria -
672; Metazoa - 1089; Fungi - 230; Plants - 220; Viruses -
37; Other Eukaryotes - 783 (source: NCBI BLink).		 -0.67 0.31 -0.29
94 AT2G45810 DEA(D/H)-box RNA helicase family protein -0.67 0.32 -0.29
95 AT2G47220 DOMAIN OF UNKNOWN FUNCTION 724 5 DOMAIN OF UNKNOWN FUNCTION 724 5,
DOMAIN OF UNKNOWN FUNCTION 724 5		 -0.67 0.29 -0.31
96 AT3G22360 alternative oxidase 1B alternative oxidase 1B 0.67 0.32 -0.3
97 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 -0.67 0.33 -0.29
98 AT5G14460 Pseudouridine synthase family protein -0.66 0.3 -0.31
99 AT2G44650 chloroplast chaperonin 10 chloroplast chaperonin 10,
CHLOROPLAST CHAPERONIN 10		 -0.66 0.31 -0.33
100 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 -0.66 0.31 -0.32
101 ATCG00280 photosystem II reaction center protein C photosystem II reaction center
protein C		 -0.66 0.3 -0.34
102 AT4G37930 serine transhydroxymethyltransferase 1 serine
transhydroxymethyltransferase 1,
SERINE HYDROXYMETHYLTRANSFERASE 1,
SERINE
TRANSHYDROXYMETHYLTRANSFERASE		 -0.66 0.33 -0.3
103 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 0.66 0.32 -0.32
104 AT2G40680 transposable element gene -0.66 0.32 -0.31
105 AT2G47940 DEGP protease 2 DEGP protease 2, EMBRYO DEFECTIVE
3117		 -0.66 0.31 -0.33
106 AT2G30000 PHF5-like protein 0.66 0.33 -0.34
107 AT4G18820 AAA-type ATPase family protein -0.66 0.31 -0.32
108 AT1G56080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 12 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G16520.1); Has 196 Blast
hits to 193 proteins in 50 species: Archae - 2; Bacteria -
0; Metazoa - 9; Fungi - 2; Plants - 132; Viruses - 0; Other
Eukaryotes - 51 (source: NCBI BLink).		 0.66 0.34 -0.28
109 AT4G35050 Transducin family protein / WD-40 repeat family protein MULTICOPY SUPPRESSOR OF IRA1 3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP C 3		 0.66 0.32 -0.3
110 AT4G38780 Pre-mRNA-processing-splicing factor -0.66 0.32 -0.31
111 AT2G34080 Cysteine proteinases superfamily protein 0.66 0.31 -0.34
112 AT1G30550 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.31 -0.31
113 ATCG00570 photosystem II reaction center protein F photosystem II reaction center
protein F		 -0.66 0.29 -0.32
114 AT5G58590 RAN binding protein 1 RAN binding protein 1 0.66 0.3 -0.3
115 AT4G34560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits
to 66 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.33 -0.32
116 AT2G38905 Low temperature and salt responsive protein family -0.66 0.32 -0.31
117 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 -0.66 0.33 -0.29
118 AT2G46140 Late embryogenesis abundant protein 0.66 0.32 -0.31
119 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 -0.66 0.33 -0.34
120 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 -0.66 0.29 -0.3
121 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 0.65 0.3 -0.31
122 AT2G38700 mevalonate diphosphate decarboxylase 1 ATMVD1, mevalonate diphosphate
decarboxylase 1		 0.65 0.32 -0.29
123 AT4G32680 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.65 0.29 -0.32
124 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 0.64 0.32 -0.3
125 AT3G54770 RNA-binding (RRM/RBD/RNP motifs) family protein 0.64 0.31 -0.31
126 AT3G49780 phytosulfokine 4 precursor ATPSK3 (FORMER SYMBOL),
phytosulfokine 4 precursor,
phytosulfokine 4 precursor		 0.64 0.32 -0.3
127 AT1G51840 protein kinase-related 0.64 0.32 -0.33
128 AT5G53290 cytokinin response factor 3 cytokinin response factor 3 0.64 0.33 -0.3
129 AT3G12700 Eukaryotic aspartyl protease family protein 0.64 0.32 -0.3
130 AT3G12070 RAB geranylgeranyl transferase beta subunit 2 RAB geranylgeranyl transferase
beta subunit 2, RAB geranylgeranyl
transferase beta subunit 2		 0.64 0.31 -0.32
131 AT2G22570 nicotinamidase 1 A. THALIANA NICOTINAMIDASE 1,
nicotinamidase 1		 0.64 0.3 -0.31
132 AT1G08370 decapping 1 ATDCP1, decapping 1 0.63 0.36 -0.3
133 AT2G35910 RING/U-box superfamily protein 0.63 0.31 -0.32
134 AT1G17060 cytochrome p450 72c1 CHIBI 2, cytochrome p450 72c1,
SHRINK 1, SUPPRESSOR OF PHYB-4 7		 0.63 0.32 -0.3
135 AT3G25900 Homocysteine S-methyltransferase family protein ATHMT-1, HMT-1 0.63 0.33 -0.31
136 AT1G47750 peroxin 11A peroxin 11A 0.63 0.3 -0.31
137 AT2G34020 Calcium-binding EF-hand family protein 0.63 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
138 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.73 0.45 -0.46 C0234
139 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		-0.71 0.42 -0.42 C0063
140 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		0.7 0.47 -0.46 C0227
141 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine -0.7 0.45 -0.46 C0030
142 C0094 Galactosamine D-Galactosamine - - -0.68 0.43 -0.45