AT3G45780 : JK224
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AGICode AT3G45780
Description phototropin 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G45780 phototropin 1 JK224, NONPHOTOTROPIC HYPOCOTYL 1,
phototropin 1, ROOT PHOTOTROPISM 1
1 0.32 -0.3
2 AT4G19880 Glutathione S-transferase family protein -0.9 0.3 -0.31
3 AT3G15570 Phototropic-responsive NPH3 family protein 0.9 0.32 -0.34
4 AT1G50280 Phototropic-responsive NPH3 family protein 0.88 0.32 -0.29
5 AT4G04340 ERD (early-responsive to dehydration stress) family protein 0.88 0.3 -0.3
6 AT3G20820 Leucine-rich repeat (LRR) family protein 0.87 0.31 -0.31
7 AT2G01420 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 4,
PIN-FORMED 4
0.87 0.29 -0.31
8 AT2G02950 phytochrome kinase substrate 1 phytochrome kinase substrate 1 0.86 0.32 -0.32
9 AT1G14130 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
-0.86 0.3 -0.34
10 AT1G73870 B-box type zinc finger protein with CCT domain 0.86 0.31 -0.31
11 AT1G75270 dehydroascorbate reductase 2 dehydroascorbate reductase 2 -0.86 0.32 -0.3
12 AT3G25290 Auxin-responsive family protein -0.86 0.31 -0.34
13 AT5G63840 Glycosyl hydrolases family 31 protein PRIORITY IN SWEET LIFE 5, RADIAL
SWELLING 3
-0.85 0.31 -0.29
14 AT4G27440 protochlorophyllide oxidoreductase B protochlorophyllide oxidoreductase
B
0.85 0.32 -0.32
15 AT4G28220 NAD(P)H dehydrogenase B1 NAD(P)H dehydrogenase B1 0.85 0.31 -0.29
16 AT3G05470 Actin-binding FH2 (formin homology 2) family protein 0.85 0.31 -0.33
17 AT1G03630 protochlorophyllide oxidoreductase C protochlorophyllide oxidoreductase
C, PORC
0.85 0.3 -0.3
18 AT1G29670 GDSL-like Lipase/Acylhydrolase superfamily protein 0.85 0.31 -0.31
19 AT1G21810 Plant protein of unknown function (DUF869) 0.85 0.31 -0.32
20 AT1G04980 PDI-like 2-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 10, PDI-like
2-2, PROTEIN DISULFIDE ISOMERASE,
PDI-like 2-2
-0.84 0.32 -0.3
21 AT2G36870 xyloglucan endotransglucosylase/hydrolase 32 xyloglucan
endotransglucosylase/hydrolase 32
0.84 0.33 -0.29
22 AT3G09270 glutathione S-transferase TAU 8 glutathione S-transferase TAU 8,
glutathione S-transferase TAU 8
-0.84 0.32 -0.32
23 AT5G11420 Protein of unknown function, DUF642 0.84 0.34 -0.31
24 AT2G25110 stromal cell-derived factor 2-like protein precursor Arabidopsis thaliana STROMAL
CELL-DERIVED FACTOR 2-like protein
precursor, ATSDF2-LIKE, stromal
cell-derived factor 2-like protein
precursor
-0.84 0.33 -0.32
25 AT5G51040 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF339 (InterPro:IPR005631); Has 532 Blast
hits to 532 proteins in 207 species: Archae - 0; Bacteria -
285; Metazoa - 16; Fungi - 41; Plants - 40; Viruses - 0;
Other Eukaryotes - 150 (source: NCBI BLink).
-0.84 0.3 -0.33
26 AT1G77370 Glutaredoxin family protein -0.84 0.31 -0.32
27 AT2G15090 3-ketoacyl-CoA synthase 8 3-ketoacyl-CoA synthase 8 0.84 0.31 -0.3
28 AT1G32170 xyloglucan endotransglucosylase/hydrolase 30 xyloglucan
endotransglucosylase/hydrolase 30,
xyloglucan endotransglycosylase 4
-0.84 0.33 -0.31
29 AT1G20650 Protein kinase superfamily protein ALTERED SEED GERMINATION 5 0.84 0.31 -0.34
30 AT4G25960 P-glycoprotein 2 ATP-binding cassette B2,
P-glycoprotein 2
0.83 0.33 -0.3
31 AT5G21105 Plant L-ascorbate oxidase -0.83 0.32 -0.31
32 AT1G14380 IQ-domain 28 IQ-domain 28 0.83 0.32 -0.31
33 AT5G67600 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).
WINDHOSE 1 -0.83 0.3 -0.32
34 AT1G22400 UDP-Glycosyltransferase superfamily protein ARABIDOPSIS THALIANA UDP-GLUCOSYL
TRANSFERASE 85A1, UGT85A1
-0.83 0.3 -0.31
35 AT4G34220 Leucine-rich repeat protein kinase family protein 0.83 0.32 -0.3
36 AT1G04850 ubiquitin-associated (UBA)/TS-N domain-containing protein -0.83 0.32 -0.33
37 AT3G55470 Calcium-dependent lipid-binding (CaLB domain) family
protein
-0.83 0.33 -0.33
38 AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein
0.83 0.31 -0.3
39 AT2G29420 glutathione S-transferase tau 7 glutathione S-transferase tau 7,
GLUTATHIONE S-TRANSFERASE 25,
glutathione S-transferase tau 7
-0.83 0.29 -0.3
40 AT1G13250 galacturonosyltransferase-like 3 galacturonosyltransferase-like 3 0.83 0.3 -0.32
41 AT5G63680 Pyruvate kinase family protein -0.82 0.31 -0.29
42 AT5G16450 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase
-0.82 0.3 -0.33
43 AT5G66330 Leucine-rich repeat (LRR) family protein 0.82 0.32 -0.31
44 AT1G28440 HAESA-like 1 HAESA-like 1 0.82 0.31 -0.3
45 AT4G04330 Chaperonin-like RbcX protein AtRbcX1, homologue of
cyanobacterial RbcX 1
0.82 0.3 -0.3
46 AT3G22850 Aluminium induced protein with YGL and LRDR motifs -0.82 0.32 -0.3
47 AT1G75820 Leucine-rich receptor-like protein kinase family protein ATCLV1, CLAVATA 1, FASCIATA 3,
FLOWER DEVELOPMENT 5
0.82 0.31 -0.29
48 AT2G44350 Citrate synthase family protein ATCS, CITRATE SYNTHASE 4 -0.82 0.31 -0.3
49 AT3G61150 homeodomain GLABROUS 1 HOMEODOMAIN-GLABRA2 1, homeodomain
GLABROUS 1
0.81 0.32 -0.3
50 AT5G42480 Chaperone DnaJ-domain superfamily protein ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 6
0.81 0.3 -0.31
51 AT5G25940 early nodulin-related -0.81 0.33 -0.33
52 AT1G68520 B-box type zinc finger protein with CCT domain 0.81 0.34 -0.33
53 AT5G17380 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein
-0.81 0.31 -0.32
54 AT3G56950 small and basic intrinsic protein 2;1 SMALL AND BASIC INTRINSIC PROTEIN
2, small and basic intrinsic
protein 2;1
-0.81 0.3 -0.32
55 AT1G19110 inter-alpha-trypsin inhibitor heavy chain-related 0.81 0.31 -0.31
56 AT2G32920 PDI-like 2-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 9, PDI-like
2-3, PROTEIN DISULFIDE ISOMERASE
9, PDI-like 2-3
-0.81 0.31 -0.33
57 AT3G44320 nitrilase 3 NITRILASE 3, nitrilase 3 -0.81 0.3 -0.35
58 AT2G45600 alpha/beta-Hydrolases superfamily protein 0.8 0.28 -0.31
59 AT2G33860 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related
AUXIN RESPONSE TRANSCRIPTION
FACTOR 3, ETTIN
0.8 0.32 -0.3
60 AT1G29195 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, 4 leaf senescence
stage, petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.8 0.33 -0.32
61 AT5G45410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits
to 124 proteins in 34 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.8 0.29 -0.31
62 AT3G05970 long-chain acyl-CoA synthetase 6 ATLACS6, long-chain acyl-CoA
synthetase 6
-0.8 0.32 -0.32
63 AT3G12800 short-chain dehydrogenase-reductase B DECR, short-chain
dehydrogenase-reductase B
-0.8 0.31 -0.29
64 AT1G09300 Metallopeptidase M24 family protein -0.8 0.32 -0.32
65 AT1G51080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 11 growth stages; Has 101 Blast hits to 98 proteins
in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38;
Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).
0.8 0.32 -0.31
66 AT3G11330 plant intracellular ras group-related LRR 9 plant intracellular ras
group-related LRR 9
-0.8 0.31 -0.32
67 AT4G33780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40
Blast hits to 40 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
-0.8 0.31 -0.31
68 AT1G30040 gibberellin 2-oxidase gibberellin 2-oxidase, gibberellin
2-oxidase, GIBBERELLIN 2-OXIDASE 2
-0.8 0.31 -0.31
69 AT2G34070 TRICHOME BIREFRINGENCE-LIKE 37 TRICHOME BIREFRINGENCE-LIKE 37 -0.8 0.31 -0.29
70 AT1G05000 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP1, plant and fungi
atypical dual-specificity
phosphatase 1
-0.8 0.32 -0.34
71 AT4G18580 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
-0.8 0.31 -0.31
72 AT2G36050 ovate family protein 15 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 15, ovate family protein
15
0.8 0.3 -0.32
73 AT5G07440 glutamate dehydrogenase 2 glutamate dehydrogenase 2 -0.79 0.29 -0.32
74 AT3G59060 phytochrome interacting factor 3-like 6 PHYTOCHROME-INTERACTING FACTOR 5,
phytochrome interacting factor
3-like 6
0.79 0.32 -0.34
75 AT4G30270 xyloglucan endotransglucosylase/hydrolase 24 MERISTEM 5, meristem-5, SENESCENCE
4, xyloglucan
endotransglucosylase/hydrolase 24
-0.79 0.3 -0.32
76 AT1G24180 Thiamin diphosphate-binding fold (THDP-binding) superfamily
protein
IAA-CONJUGATE-RESISTANT 4 -0.79 0.31 -0.3
77 AT1G51820 Leucine-rich repeat protein kinase family protein -0.79 0.32 -0.31
78 AT5G12880 proline-rich family protein -0.79 0.33 -0.32
79 AT2G27450 nitrilase-like protein 1 ATNLP1, CPA, nitrilase-like
protein 1
-0.79 0.31 -0.32
80 AT3G13910 Protein of unknown function (DUF3511) -0.79 0.33 -0.31
81 AT5G56860 GATA type zinc finger transcription factor family protein GATA TRANSCRIPTION FACTOR 21,
GATA, nitrate-inducible, carbon
metabolism-involved
0.79 0.3 -0.32
82 AT3G59420 crinkly4 crinkly4, crinkly4 0.79 0.31 -0.34
83 AT4G23885 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.79 0.32 -0.32
84 AT5G55990 calcineurin B-like protein 2 ATCBL2, calcineurin B-like protein
2
0.79 0.3 -0.34
85 AT5G38710 Methylenetetrahydrofolate reductase family protein -0.79 0.32 -0.32
86 AT1G05620 uridine-ribohydrolase 2 nucleoside hydrolase 2,
uridine-ribohydrolase 2
-0.79 0.31 -0.31
87 AT4G23470 PLAC8 family protein -0.79 0.32 -0.3
88 AT3G12800 short-chain dehydrogenase-reductase B DECR, short-chain
dehydrogenase-reductase B
-0.79 0.29 -0.3
89 AT5G40650 succinate dehydrogenase 2-2 succinate dehydrogenase 2-2 -0.79 0.29 -0.29
90 AT2G42600 phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase 2,
phosphoenolpyruvate carboxylase 2
0.79 0.32 -0.32
91 AT4G37430 cytochrome P450, family 91, subfamily A, polypeptide 2 CYTOCHROME P450 MONOOXYGENASE
81F1, cytochrome P450, family 91,
subfamily A, polypeptide 2
-0.79 0.33 -0.32
92 AT5G50760 SAUR-like auxin-responsive protein family -0.79 0.33 -0.32
93 AT5G51560 Leucine-rich repeat protein kinase family protein 0.78 0.32 -0.29
94 AT2G40540 potassium transporter 2 ATKT2, ATKUP2, potassium
transporter 2, KUP2, SHY3, TRK2
0.78 0.32 -0.33
95 AT3G44190 FAD/NAD(P)-binding oxidoreductase family protein -0.78 0.32 -0.32
96 AT1G14330 Galactose oxidase/kelch repeat superfamily protein -0.78 0.3 -0.29
97 AT3G27380 succinate dehydrogenase 2-1 succinate dehydrogenase 2-1 -0.78 0.31 -0.32
98 AT1G44446 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain
ARABIDOPSIS THALIANA CHLOROPHYLL A
OXYGENASE, CHLOROPHYLL A
OXYGENASE, CHLORINA 1
0.78 0.32 -0.34
99 AT1G80360 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein
-0.78 0.3 -0.31
100 AT3G02250 O-fucosyltransferase family protein 0.78 0.32 -0.3
101 AT1G63460 glutathione peroxidase 8 ATGPX8, glutathione peroxidase 8 -0.78 0.3 -0.33
102 AT1G72470 exocyst subunit exo70 family protein D1 exocyst subunit exo70 family
protein D1, exocyst subunit exo70
family protein D1
-0.78 0.32 -0.3
103 AT1G18840 IQ-domain 30 IQ-domain 30 0.78 0.32 -0.33
104 AT5G19210 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.78 0.3 -0.32
105 AT3G04860 Plant protein of unknown function (DUF868) 0.78 0.31 -0.32
106 AT3G01280 voltage dependent anion channel 1 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 1, voltage
dependent anion channel 1
-0.78 0.32 -0.32
107 AT3G25610 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein
-0.78 0.32 -0.35
108 AT3G06860 multifunctional protein 2 MULTIFUNCTIONAL PROTEIN 2,
multifunctional protein 2
-0.77 0.33 -0.31
109 AT1G22800 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
-0.77 0.32 -0.31
110 AT5G47760 2-phosphoglycolate phosphatase 2 2-phosphoglycolate phosphatase 2,
ATPK5, PGLP2, 2-phosphoglycolate
phosphatase 2
-0.77 0.32 -0.32
111 AT5G56090 cytochrome c oxidase 15 cytochrome c oxidase 15 -0.77 0.33 -0.3
112 AT2G32660 receptor like protein 22 receptor like protein 22, receptor
like protein 22
-0.77 0.29 -0.32
113 AT3G61070 peroxin 11E peroxin 11E -0.77 0.34 -0.3
114 AT5G11520 aspartate aminotransferase 3 aspartate aminotransferase 3,
YELLOW-LEAF-SPECIFIC GENE 4
-0.77 0.32 -0.32
115 AT4G25030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G45410.3); Has 125 Blast hits
to 125 proteins in 36 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 4; Plants - 88; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.77 0.3 -0.32
116 AT5G13490 ADP/ATP carrier 2 ADP/ATP carrier 2 -0.77 0.32 -0.31
117 AT4G26310 elongation factor P (EF-P) family protein -0.77 0.27 -0.32
118 AT2G47380 Cytochrome c oxidase subunit Vc family protein -0.76 0.32 -0.33
119 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B
-0.76 0.34 -0.31
120 AT4G15940 Fumarylacetoacetate (FAA) hydrolase family -0.76 0.32 -0.32
121 AT2G03800 D-aminoacyl-tRNA deacylases GEKO1 -0.76 0.31 -0.31
122 AT5G40690 CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site
(InterPro:IPR018247); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41730.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
-0.76 0.31 -0.31
123 AT3G02360 6-phosphogluconate dehydrogenase family protein -0.76 0.33 -0.31
124 AT3G04520 threonine aldolase 2 threonine aldolase 2 -0.76 0.29 -0.33
125 AT4G25810 xyloglucan endotransglycosylase 6 xyloglucan
endotransglucosylase/hydrolase 23,
xyloglucan endotransglycosylase 6
-0.76 0.33 -0.33
126 AT3G26470 Powdery mildew resistance protein, RPW8 domain -0.76 0.32 -0.32
127 AT2G31200 actin depolymerizing factor 6 actin depolymerizing factor 6,
ATADF6
-0.76 0.32 -0.31
128 AT3G09810 isocitrate dehydrogenase VI isocitrate dehydrogenase VI -0.76 0.32 -0.3
129 AT5G17650 glycine/proline-rich protein -0.76 0.32 -0.31
130 AT1G27000 Protein of unknown function (DUF1664) -0.76 0.32 -0.31
131 AT3G62600 DNAJ heat shock family protein ATERDJ3B, ERDJ3B -0.76 0.3 -0.32
132 AT4G10040 cytochrome c-2 cytochrome c-2 -0.76 0.33 -0.31
133 AT3G17240 lipoamide dehydrogenase 2 lipoamide dehydrogenase 2 -0.75 0.31 -0.31
134 AT2G28130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; Has 35333
Blast hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
-0.75 0.32 -0.32
135 AT2G43080 P4H isoform 1 P4H isoform 1 -0.75 0.3 -0.32
136 AT5G18490 Plant protein of unknown function (DUF946) -0.75 0.33 -0.27
137 AT1G77510 PDI-like 1-2 PROTEIN DISULFIDE ISOMERASE 6,
PDI-like 1-2, PROTEIN DISULFIDE
ISOMERASE 6, PDI-like 1-2
-0.75 0.3 -0.33
138 AT5G46180 ornithine-delta-aminotransferase ornithine-delta-aminotransferase -0.75 0.32 -0.32
139 AT1G79410 organic cation/carnitine transporter5 organic cation/carnitine
transporter5, organic
cation/carnitine transporter5
-0.75 0.32 -0.32
140 AT5G14730 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1645 (InterPro:IPR012442); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G01513.1); Has 85 Blast hits to 83 proteins in 14
species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0;
Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.75 0.33 -0.33
141 AT4G35630 phosphoserine aminotransferase phosphoserine aminotransferase -0.75 0.31 -0.31
142 AT3G28210 zinc finger (AN1-like) family protein PMZ, STRESS-ASSOCIATED PROTEIN 12 -0.75 0.34 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
143 C0167 MST_1744.8 - - - 0.87 0.51 -0.46
144 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis 0.79 0.46 -0.46 C0003
145 C0128 Jasmonic acid (+/-)-Jasmonic acid (+)-Jasmonate; (-)-Jasmonate jasmonic acid biosynthesis -0.78 0.43 -0.44 C0128