AT3G45960 : expansin-like A3
Query Information
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AGICode AT3G45960
Description expansin-like A3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G45960 expansin-like A3 expansin-like A3, ATEXPL3, ATHEXP
BETA 2.3, expansin-like A3, EXPL3		 1 0.31 -0.32
2 AT3G10850 Metallo-hydrolase/oxidoreductase superfamily protein GLYOXALASE 2-2, GLY2 -0.75 0.33 -0.32
3 AT4G21860 methionine sulfoxide reductase B 2 methionine sulfoxide reductase B 2 -0.74 0.35 -0.28
4 AT4G20390 Uncharacterised protein family (UPF0497) 0.72 0.31 -0.33
5 AT4G38020 tRNA/rRNA methyltransferase (SpoU) family protein -0.72 0.31 -0.31
6 AT5G62330 BEST Arabidopsis thaliana protein match is: Plant
invertase/pectin methylesterase inhibitor superfamily
protein (TAIR:AT5G62340.1); Has 9 Blast hits to 9 proteins
in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.31 -0.32
7 AT4G14910 HISTIDINE BIOSYNTHESIS 5B HISTIDINE BIOSYNTHESIS 5B -0.71 0.31 -0.32
8 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family
protein		 -0.71 0.32 -0.31
9 AT1G79160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits
to 102 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.33 -0.33
10 AT1G74460 GDSL-like Lipase/Acylhydrolase superfamily protein 0.7 0.3 -0.32
11 AT4G26980 RNI-like superfamily protein -0.7 0.32 -0.33
12 AT1G65480 PEBP (phosphatidylethanolamine-binding protein) family
protein		 FLOWERING LOCUS T 0.69 0.32 -0.32
13 AT4G36910 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 1,
CYSTATHIONE [BETA]-SYNTHASE
DOMAIN-CONTAINING PROTEIN 2, LOSS
OF THE TIMING OF ET AND JA
BIOSYNTHESIS 2		 -0.69 0.3 -0.3
14 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.69 0.3 -0.32
15 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.68 0.34 -0.32
16 AT2G30210 laccase 3 laccase 3 0.68 0.34 -0.32
17 AT4G33790 Jojoba acyl CoA reductase-related male sterility protein ECERIFERUM 4, FATTY ACID REDUCTASE
3, G7		 0.68 0.33 -0.33
18 AT5G12420 O-acyltransferase (WSD1-like) family protein 0.68 0.32 -0.33
19 AT4G11980 nudix hydrolase homolog 14 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 14, nudix
hydrolase homolog 14, nudix
hydrolase homolog 14		 -0.67 0.31 -0.32
20 AT5G50920 CLPC homologue 1 ATHSP93-V, CLPC, CLPC homologue 1,
DE-REGULATED CAO ACCUMULATION 1,
HEAT SHOCK PROTEIN 93-V		 -0.67 0.3 -0.32
21 AT2G43390 unknown protein; Has 7 Blast hits to 7 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.33 -0.31
22 AT5G56270 WRKY DNA-binding protein 2 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 2, WRKY
DNA-binding protein 2		 -0.67 0.33 -0.29
23 AT5G65620 Zincin-like metalloproteases family protein -0.67 0.33 -0.3
24 AT5G41210 glutathione S-transferase THETA 1 glutathione S-transferase THETA 1,
GST10, glutathione S-transferase
THETA 1		 -0.67 0.31 -0.32
25 AT1G58420 Uncharacterised conserved protein UCP031279 0.67 0.33 -0.31
26 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 -0.66 0.32 -0.32
27 AT3G44620 protein tyrosine phosphatases;protein tyrosine phosphatases -0.66 0.32 -0.31
28 AT2G15290 translocon at inner membrane of chloroplasts 21 TRANSLOCON AT INNER MEMBRANE OF
CHLOROPLASTS 21, CHLOROPLAST
IMPORT APPARATUS 5, PERMEASE IN
CHLOROPLASTS 1, translocon at
inner membrane of chloroplasts 21		 -0.66 0.32 -0.32
29 AT2G35380 Peroxidase superfamily protein 0.66 0.3 -0.31
30 AT5G15180 Peroxidase superfamily protein 0.66 0.31 -0.32
31 AT2G40160 Plant protein of unknown function (DUF828) TBL30 0.66 0.31 -0.3
32 AT5G59610 Chaperone DnaJ-domain superfamily protein -0.66 0.29 -0.34
33 AT4G16490 ARM repeat superfamily protein -0.66 0.31 -0.33
34 AT2G21100 Disease resistance-responsive (dirigent-like protein)
family protein		 0.65 0.32 -0.3
35 AT1G02560 nuclear encoded CLP protease 5 nuclear encoded CLP protease 5,
NUCLEAR-ENCODED CLPP 1, NUCLEAR
CLPP 5		 -0.65 0.32 -0.33
36 AT3G32160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 28 Blast hits
to 28 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.31
37 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4		 -0.65 0.29 -0.32
38 AT5G09480 hydroxyproline-rich glycoprotein family protein 0.65 0.31 -0.29
39 AT5G18760 RING/U-box superfamily protein -0.65 0.35 -0.32
40 AT4G17280 Auxin-responsive family protein 0.65 0.3 -0.31
41 AT1G32400 tobamovirus multiplication 2A tobamovirus multiplication 2A -0.64 0.32 -0.32
42 AT5G17350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 8 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.31 -0.33
43 AT3G09150 phytochromobilin:ferredoxin oxidoreductase, chloroplast /
phytochromobilin synthase (HY2)		 ARABIDOPSIS ELONGATED HYPOCOTYL 2,
GENOMES UNCOUPLED 3, ELONGATED
HYPOCOTYL 2		 -0.64 0.31 -0.32
44 AT4G36610 alpha/beta-Hydrolases superfamily protein 0.64 0.33 -0.31
45 AT3G56460 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.64 0.31 -0.32
46 AT1G47340 F-box and associated interaction domains-containing protein -0.63 0.33 -0.3
47 AT2G23540 GDSL-like Lipase/Acylhydrolase superfamily protein 0.63 0.31 -0.34
48 AT4G25250 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.63 0.3 -0.29
49 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 -0.63 0.31 -0.31
50 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 0.63 0.33 -0.31
51 AT5G42390 Insulinase (Peptidase family M16) family protein stromal processing peptidase -0.63 0.32 -0.3
52 AT2G33790 arabinogalactan protein 30 arabinogalactan protein 30,
ATAGP30		 0.63 0.31 -0.3
53 AT4G25130 peptide met sulfoxide reductase 4 peptide met sulfoxide reductase 4 -0.63 0.33 -0.31
54 AT3G28920 homeobox protein 34 homeobox protein 34, homeobox
protein 34, ZINC FINGER
HOMEODOMAIN 9		 -0.63 0.32 -0.33
55 AT5G16810 Protein kinase superfamily protein -0.63 0.31 -0.31
56 AT5G51190 Integrase-type DNA-binding superfamily protein 0.63 0.32 -0.3
57 AT5G58860 cytochrome P450, family 86, subfamily A, polypeptide 1 CYP86, cytochrome P450, family 86,
subfamily A, polypeptide 1		 0.63 0.31 -0.33
58 AT2G18800 xyloglucan endotransglucosylase/hydrolase 21 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 21,
xyloglucan
endotransglucosylase/hydrolase 21		 0.63 0.33 -0.31
59 AT4G26320 arabinogalactan protein 13 arabinogalactan protein 13 0.63 0.33 -0.29
60 AT1G14570 UBX domain-containing protein -0.62 0.3 -0.31
61 AT3G61220 NAD(P)-binding Rossmann-fold superfamily protein short-chain
dehydrogenase/reductase 1		 -0.62 0.31 -0.32
62 AT1G53830 pectin methylesterase 2 pectin methylesterase 2, pectin
methylesterase 2		 0.62 0.3 -0.32
63 AT5G16660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, membrane,
chloroplast envelope; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.62 0.3 -0.32
64 AT3G63360 defensin-related 0.62 0.32 -0.3
65 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.62 0.3 -0.31
66 AT5G39790 5'-AMP-activated protein kinase-related -0.62 0.34 -0.3
67 AT1G73780 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.62 0.29 -0.31
68 AT5G37690 SGNH hydrolase-type esterase superfamily protein 0.62 0.3 -0.33
69 AT1G48620 high mobility group A5 high mobility group A5 -0.62 0.32 -0.31
70 AT5G56540 arabinogalactan protein 14 arabinogalactan protein 14,
ATAGP14		 0.62 0.31 -0.31
71 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 -0.62 0.29 -0.32
72 AT2G48140 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 embryo sac development arrest 4 0.62 0.3 -0.32
73 AT2G32300 uclacyanin 1 uclacyanin 1 0.62 0.34 -0.32
74 AT1G27070 5'-AMP-activated protein kinase-related -0.61 0.32 -0.29
75 AT4G02700 sulfate transporter 3;2 sulfate transporter 3;2 -0.61 0.31 -0.32
76 AT4G24140 alpha/beta-Hydrolases superfamily protein 0.61 0.3 -0.31
77 AT5G65780 branched-chain amino acid aminotransferase 5 /
branched-chain amino acid transaminase 5 (BCAT5)		 ATBCAT-5 -0.61 0.32 -0.34
78 AT3G25640 Protein of unknown function, DUF617 0.61 0.31 -0.32
79 AT3G63000 NPL4-like protein 1 NPL4-like protein 1 -0.61 0.33 -0.32
80 AT5G44550 Uncharacterised protein family (UPF0497) 0.61 0.31 -0.34
81 AT1G78620 Protein of unknown function DUF92, transmembrane -0.61 0.33 -0.3
82 AT2G19310 HSP20-like chaperones superfamily protein -0.6 0.3 -0.31
83 AT3G06580 Mevalonate/galactokinase family protein GALACTOSE KINASE 1, GALK -0.6 0.32 -0.32
84 AT2G25160 cytochrome P450, family 82, subfamily F, polypeptide 1 cytochrome P450, family 82,
subfamily F, polypeptide 1		 0.6 0.31 -0.31
85 AT3G57950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, petal differentiation
and expansion stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast
hits to 81 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.32 -0.29
86 AT3G62820 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.6 0.3 -0.32
87 AT5G47450 tonoplast intrinsic protein 2;3 ARABIDOPSIS THALIANA TONOPLAST
INTRINSIC PROTEIN 2;3,
DELTA-TONOPLAST INTRINSIC PROTEIN
3, tonoplast intrinsic protein 2;3		 0.6 0.33 -0.33
88 AT1G56320 BEST Arabidopsis thaliana protein match is: Glycine-rich
protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.6 0.33 -0.3
89 AT1G28400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins
in 668 species: Archae - 72; Bacteria - 1460; Metazoa -
1191; Fungi - 1038; Plants - 174; Viruses - 64; Other
Eukaryotes - 41375 (source: NCBI BLink).		 0.6 0.3 -0.29
90 AT3G14450 CTC-interacting domain 9 CTC-interacting domain 9 -0.6 0.32 -0.32
91 AT1G14480 Ankyrin repeat family protein 0.6 0.31 -0.34
92 AT2G30040 mitogen-activated protein kinase kinase kinase 14 mitogen-activated protein kinase
kinase kinase 14		 0.6 0.32 -0.3
93 AT5G62770 Protein of unknown function (DUF1645) 0.6 0.34 -0.33
94 AT5G26930 GATA transcription factor 23 GATA transcription factor 23 0.59 0.3 -0.31
95 AT2G19380 RNA recognition motif (RRM)-containing protein 0.59 0.3 -0.33
96 AT4G26510 uridine kinase-like 4 uridine kinase-like 4 -0.59 0.32 -0.33
97 AT1G73990 signal peptide peptidase signal peptide peptidase, SPPA1 -0.59 0.32 -0.31
98 AT1G26920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G69760.1); Has 47 Blast hits
to 47 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 7; Plants - 34; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 -0.59 0.31 -0.31
99 AT5G13180 NAC domain containing protein 83 NAC domain containing protein 83,
NAC domain containing protein 83,
VND-interacting 2		 -0.59 0.32 -0.3
100 AT2G32280 Protein of unknown function (DUF1218) 0.59 0.32 -0.32
101 AT1G49960 Xanthine/uracil permease family protein 0.59 0.33 -0.3
102 AT4G12060 Double Clp-N motif protein -0.58 0.32 -0.31
103 AT5G21070 unknown protein; Has 115 Blast hits to 115 proteins in 34
species: Archae - 1; Bacteria - 36; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 18 (source:
NCBI BLink).		 -0.58 0.31 -0.32
104 AT2G26670 Plant haem oxygenase (decyclizing) family protein ARABIDOPSIS THALIANA HEME
OXYGENASE 1, GENOMES UNCOUPLED 2,
HEME OXYGENASE 1, HEME OXYGENASE
1, HEME OXYGENASE 6, REVERSAL OF
THE DET PHENOTYPE 4		 -0.58 0.31 -0.31
105 AT1G07640 Dof-type zinc finger DNA-binding family protein OBP2 -0.58 0.33 -0.31
106 AT1G14920 GRAS family transcription factor family protein GIBBERELLIC ACID INSENSITIVE,
RESTORATION ON GROWTH ON AMMONIA 2		 -0.58 0.29 -0.33
107 AT3G03070 NADH-ubiquinone oxidoreductase-related -0.58 0.32 -0.31
108 AT5G22760 PHD finger family protein -0.58 0.34 -0.3
109 AT1G09130 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.58 0.29 -0.29
110 AT4G38080 hydroxyproline-rich glycoprotein family protein 0.58 0.32 -0.32
111 AT1G28130 Auxin-responsive GH3 family protein GH3.17 0.58 0.33 -0.33
112 AT2G39410 alpha/beta-Hydrolases superfamily protein 0.58 0.32 -0.32
113 AT3G12920 SBP (S-ribonuclease binding protein) family protein BOI-related gene 3 -0.58 0.3 -0.32
114 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 -0.58 0.34 -0.32
115 AT5G59990 CCT motif family protein 0.58 0.3 -0.32
116 AT1G71980 Protease-associated (PA) RING/U-box zinc finger family
protein		 -0.57 0.31 -0.34
117 AT4G17215 Pollen Ole e 1 allergen and extensin family protein 0.57 0.32 -0.32
118 AT1G73410 myb domain protein 54 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 54, myb domain protein 54		 0.57 0.33 -0.3
119 AT2G33260 Tryptophan/tyrosine permease 0.57 0.31 -0.3
120 AT5G07280 Leucine-rich repeat transmembrane protein kinase EXCESS MICROSPOROCYTES1, EXTRA
SPOROGENOUS CELLS		 -0.57 0.32 -0.3
121 AT3G28970 Domain of unknown function (DUF298) antiauxin-resistant 3 -0.57 0.32 -0.32
122 AT5G64440 fatty acid amide hydrolase fatty acid amide hydrolase, fatty
acid amide hydrolase		 -0.57 0.33 -0.3
123 AT3G14100 RNA-binding (RRM/RBD/RNP motifs) family protein -0.57 0.32 -0.31
124 AT1G32500 non-intrinsic ABC protein 6 ATP-binding cassette I7,
non-intrinsic ABC protein 6,
non-intrinsic ABC protein 6		 -0.57 0.32 -0.32
125 AT2G32810 beta galactosidase 9 beta galactosidase 9,
beta-galactosidase 9		 -0.57 0.34 -0.29
126 AT1G24490 OxaA/YidC-like membrane insertion protein ALBINA 4, ARABIDOPSIS THALIANA
ENVELOPE MEMBRANE INTEGRASE		 -0.57 0.3 -0.3
127 AT1G68850 Peroxidase superfamily protein 0.57 0.34 -0.3
128 AT4G08040 1-aminocyclopropane-1-carboxylate synthase 11 1-aminocyclopropane-1-carboxylate
synthase 11		 0.57 0.31 -0.33
129 AT3G54000 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.32 -0.31
130 AT1G77640 Integrase-type DNA-binding superfamily protein 0.56 0.3 -0.31
131 AT1G25580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 8, SUPPRESSOR OF GAMMA
RADIATION 1		 0.56 0.32 -0.31
132 AT5G19410 ABC-2 type transporter family protein ATP-binding cassette G23 0.56 0.3 -0.3
133 AT4G35985 Senescence/dehydration-associated protein-related 0.56 0.32 -0.31
134 AT4G25490 C-repeat/DRE binding factor 1 ATCBF1, C-repeat/DRE binding
factor 1, DRE BINDING PROTEIN 1B		 0.56 0.33 -0.32
135 AT1G23160 Auxin-responsive GH3 family protein 0.56 0.35 -0.31
136 AT5G61600 ethylene response factor 104 ethylene response factor 104 0.56 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
137 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		-0.69 0.45 -0.45 C0073