AT3G45300 : ATIVD
Query Information
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AGICode AT3G45300
Description isovaleryl-CoA-dehydrogenase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G45300 isovaleryl-CoA-dehydrogenase ATIVD,
isovaleryl-CoA-dehydrogenase,
ISOVALERYL-COA-DEHYDROGENASE		 1 0.31 -0.31
2 AT2G35860 FASCICLIN-like arabinogalactan protein 16 precursor FASCICLIN-like arabinogalactan
protein 16 precursor		 -0.85 0.32 -0.31
3 AT5G67380 casein kinase alpha 1 ATCKA1, casein kinase alpha 1 0.84 0.3 -0.33
4 AT4G22820 A20/AN1-like zinc finger family protein 0.83 0.33 -0.31
5 AT1G27300 unknown protein; Has 54 Blast hits to 54 proteins in 19
species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6;
Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.83 0.32 -0.35
6 AT1G26930 Galactose oxidase/kelch repeat superfamily protein 0.82 0.31 -0.33
7 AT4G33150 lysine-ketoglutarate reductase/saccharopine dehydrogenase
bifunctional enzyme		 LKR, LYSINE-KETOGLUTARATE
REDUCTASE/SACCHAROPINE
DEHYDROGENASE, SACCHAROPINE
DEHYDROGENASE		 0.82 0.32 -0.29
8 AT5G11790 N-MYC downregulated-like 2 N-MYC downregulated-like 2 -0.82 0.32 -0.32
9 AT3G51840 acyl-CoA oxidase 4 acyl-CoA oxidase 4, ATG6, ATSCX 0.81 0.33 -0.33
10 AT3G04520 threonine aldolase 2 threonine aldolase 2 0.8 0.3 -0.31
11 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 0.8 0.31 -0.29
12 AT5G49330 myb domain protein 111 ARABIDOPSIS MYB DOMAIN PROTEIN
111, myb domain protein 111,
PRODUCTION OF FLAVONOL GLYCOSIDES
3		 -0.8 0.3 -0.3
13 AT1G21810 Plant protein of unknown function (DUF869) -0.8 0.29 -0.32
14 AT5G45650 subtilase family protein -0.8 0.31 -0.31
15 AT3G49670 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 2 -0.79 0.32 -0.33
16 AT4G14010 ralf-like 32 ralf-like 32 0.79 0.32 -0.33
17 AT3G51000 alpha/beta-Hydrolases superfamily protein 0.79 0.32 -0.31
18 AT3G14990 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog A, DJ-1 homolog A 0.79 0.32 -0.34
19 AT2G16790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.31 -0.33
20 AT1G18270 ketose-bisphosphate aldolase class-II family protein 0.79 0.33 -0.32
21 AT4G32150 vesicle-associated membrane protein 711 vesicle-associated membrane
protein 711, vesicle-associated
membrane protein 711		 0.79 0.29 -0.29
22 AT5G12210 RAB geranylgeranyl transferase beta subunit 1 RAB geranylgeranyl transferase
beta subunit 1, RAB geranylgeranyl
transferase beta subunit 1		 0.78 0.33 -0.32
23 AT1G75680 glycosyl hydrolase 9B7 glycosyl hydrolase 9B7, glycosyl
hydrolase 9B7		 -0.78 0.32 -0.31
24 AT1G69410 eukaryotic elongation factor 5A-3 EUKARYOTIC ELONGATION FACTOR 5A-3,
eukaryotic elongation factor 5A-3		 0.78 0.29 -0.32
25 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.32 -0.31
26 AT2G40110 Yippee family putative zinc-binding protein 0.78 0.32 -0.29
27 AT2G26300 G protein alpha subunit 1 ARABIDOPSIS THALIANA G PROTEIN
ALPHA SUBUNIT 1, G protein alpha
subunit 1, G PROTEIN ALPHA SUBUNIT
1		 0.78 0.32 -0.32
28 AT2G10940 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.78 0.33 -0.3
29 AT1G02816 Protein of unknown function, DUF538 0.77 0.28 -0.33
30 AT4G01610 Cysteine proteinases superfamily protein 0.77 0.31 -0.31
31 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 0.77 0.3 -0.32
32 AT1G34370 C2H2 and C2HC zinc fingers superfamily protein sensitive to proton rhizotoxicity
1		 0.77 0.3 -0.3
33 AT2G02710 PAS/LOV protein B PAS/LOV PROTEIN, PAS/LOV PROTEIN
A, PAS/LOV protein B, PAS/LOV
PROTEIN C		 0.77 0.31 -0.29
34 AT5G07690 myb domain protein 29 myb domain protein 29, myb domain
protein 29, PRODUCTION OF
METHIONINE-DERIVED GLUCOSINOLATE 2		 -0.77 0.31 -0.31
35 AT1G32700 PLATZ transcription factor family protein 0.77 0.3 -0.33
36 AT4G36360 beta-galactosidase 3 beta-galactosidase 3 -0.76 0.3 -0.31
37 AT4G27720 Major facilitator superfamily protein -0.76 0.3 -0.31
38 AT1G78580 trehalose-6-phosphate synthase trehalose-6-phosphate synthase,
trehalose-6-phosphate synthase,
TREHALOSE-6-PHOSPHATE SYNTHASE 1		 -0.76 0.32 -0.33
39 AT1G80160 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 7 0.76 0.31 -0.32
40 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 0.75 0.32 -0.32
41 AT5G40830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.75 0.32 -0.32
42 AT2G31945 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits
to 61 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.32 -0.33
43 AT2G47750 putative indole-3-acetic acid-amido synthetase GH3.9 putative indole-3-acetic
acid-amido synthetase GH3.9		 -0.75 0.32 -0.34
44 AT2G16720 myb domain protein 7 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 7, ATY49, myb domain
protein 7		 0.75 0.31 -0.31
45 AT1G62085 Mitochondrial transcription termination factor family
protein		 -0.75 0.34 -0.29
46 AT3G50360 centrin2 centrin2, CENTRIN 1, centrin2 0.75 0.31 -0.33
47 AT2G45310 UDP-D-glucuronate 4-epimerase 4 UDP-D-glucuronate 4-epimerase 4 -0.75 0.32 -0.32
48 AT3G60300 RWD domain-containing protein 0.75 0.3 -0.33
49 AT1G41830 SKU5-similar 6 SKU5 SIMILAR 6, SKU5-similar 6 -0.75 0.31 -0.32
50 AT1G49230 RING/U-box superfamily protein -0.74 0.32 -0.32
51 AT1G65060 4-coumarate:CoA ligase 3 4-coumarate:CoA ligase 3 -0.74 0.31 -0.31
52 AT5G03460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.74 0.31 -0.31
53 AT5G09870 cellulose synthase 5 cellulose synthase 5 -0.74 0.31 -0.32
54 AT4G10050 esterase/lipase/thioesterase family protein 0.74 0.31 -0.32
55 AT1G64390 glycosyl hydrolase 9C2 glycosyl hydrolase 9C2, glycosyl
hydrolase 9C2		 -0.74 0.31 -0.28
56 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 0.74 0.33 -0.31
57 AT4G38370 Phosphoglycerate mutase family protein -0.73 0.31 -0.32
58 AT5G11590 Integrase-type DNA-binding superfamily protein TINY2 -0.73 0.3 -0.29
59 AT1G33170 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.73 0.29 -0.3
60 AT4G16690 methyl esterase 16 ARABIDOPSIS THALIANA METHYL
ESTERASE 16, methyl esterase 16		 0.73 0.32 -0.29
61 AT3G13690 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.73 0.31 -0.29
62 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 0.73 0.31 -0.33
63 AT4G14340 casein kinase I casein kinase I, CASEIN KINASE
I-LIKE 11		 0.73 0.32 -0.33
64 AT4G12980 Auxin-responsive family protein -0.73 0.29 -0.3
65 AT5G24870 RING/U-box superfamily protein 0.72 0.32 -0.32
66 AT2G26730 Leucine-rich repeat protein kinase family protein -0.72 0.31 -0.31
67 AT1G17530 translocase of inner mitochondrial membrane 23 translocase of inner mitochondrial
membrane 23, translocase of inner
mitochondrial membrane 23		 0.72 0.32 -0.33
68 AT5G60780 nitrate transporter 2.3 ARABIDOPSIS THALIANA NITRATE
TRANSPORTER 2.3, nitrate
transporter 2.3		 -0.72 0.31 -0.34
69 AT5G63410 Leucine-rich repeat protein kinase family protein -0.72 0.31 -0.32
70 AT5G14180 Myzus persicae-induced lipase 1 Myzus persicae-induced lipase 1 0.72 0.31 -0.31
71 AT3G62920 unknown protein; Has 25 Blast hits to 25 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.34 -0.34
72 AT2G32760 unknown protein; Has 229 Blast hits to 229 proteins in 104
species: Archae - 0; Bacteria - 2; Metazoa - 79; Fungi -
90; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source:
NCBI BLink).		 -0.72 0.33 -0.34
73 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 0.72 0.35 -0.29
74 AT5G59360 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.72 0.32 -0.32
75 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 -0.72 0.3 -0.32
76 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 0.72 0.32 -0.31
77 AT5G64260 EXORDIUM like 2 EXORDIUM like 2 0.72 0.31 -0.32
78 AT4G30020 PA-domain containing subtilase family protein -0.71 0.31 -0.33
79 AT5G06270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G11600.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.71 0.32 -0.31
80 AT1G27150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.31 -0.31
81 AT2G39220 PATATIN-like protein 6 PLA IIB, PATATIN-like protein 6 -0.71 0.32 -0.31
82 AT2G29400 type one protein phosphatase 1 PROTEIN PHOSPHATASE 1, type one
protein phosphatase 1		 0.71 0.32 -0.32
83 AT5G14390 alpha/beta-Hydrolases superfamily protein 0.71 0.31 -0.32
84 AT5G61300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G07790.2); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.71 0.31 -0.31
85 AT4G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.71 0.32 -0.31
86 AT1G58180 beta carbonic anhydrase 6 A. THALIANA BETA CARBONIC
ANHYDRASE 6, beta carbonic
anhydrase 6		 0.71 0.3 -0.33
87 AT5G14780 formate dehydrogenase formate dehydrogenase 0.71 0.31 -0.31
88 AT4G18580 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.71 0.33 -0.32
89 AT4G38950 ATP binding microtubule motor family protein -0.71 0.3 -0.31
90 AT1G80640 Protein kinase superfamily protein -0.7 0.31 -0.31
91 AT3G29035 NAC domain containing protein 3 Arabidopsis NAC domain containing
protein 59, NAC domain containing
protein 3, NAC domain containing
protein 3, ORE1 SISTER1		 0.7 0.33 -0.31
92 AT3G49650 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.31 -0.34
93 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C 0.7 0.32 -0.31
94 AT3G29030 expansin A5 ARABIDOPSIS THALIANA EXPANSIN 5,
ARABIDOPSIS THALIANA EXPANSIN A5,
ATHEXP ALPHA 1.4, EXPANSIN 5,
expansin A5		 -0.7 0.31 -0.34
95 AT3G02250 O-fucosyltransferase family protein -0.7 0.32 -0.33
96 AT3G25910 Protein of unknown function (DUF1644) 0.7 0.32 -0.34
97 AT4G37750 Integrase-type DNA-binding superfamily protein AINTEGUMENTA, CKC, COMPLEMENTING A
PROTEIN KINASE C MUTANT 1, DRAGON		 -0.7 0.31 -0.31
98 AT3G08600 Protein of unknown function (DUF1191) -0.7 0.31 -0.31
99 AT3G03770 Leucine-rich repeat protein kinase family protein -0.7 0.3 -0.31
100 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 0.69 0.3 -0.32
101 AT2G28080 UDP-Glycosyltransferase superfamily protein -0.69 0.31 -0.34
102 AT3G21190 O-fucosyltransferase family protein -0.69 0.32 -0.33
103 AT5G24020 septum site-determining protein (MIND) ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 11, ATMIND1, MIND		 -0.69 0.33 -0.3
104 AT3G01420 Peroxidase superfamily protein alpha-dioxygenase 1, DIOX1, DOX1,
plant alpha dioxygenase 1		 0.69 0.32 -0.32
105 AT5G19250 Glycoprotein membrane precursor GPI-anchored -0.69 0.3 -0.31
106 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein -0.69 0.33 -0.31
107 AT2G43710 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 FATTY ACID BIOSYNTHESIS 2,
suppressor of SA insensitive 2		 -0.69 0.31 -0.3
108 AT1G33050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10470.1); Has 531 Blast hits to 229 proteins in
83 species: Archae - 0; Bacteria - 197; Metazoa - 59; Fungi
- 50; Plants - 48; Viruses - 0; Other Eukaryotes - 177
(source: NCBI BLink).		 0.69 0.32 -0.3
109 AT5G05170 Cellulose synthase family protein ATCESA3, ATH-B, CELLULOSE SYNTHASE
3, CONSTITUTIVE EXPRESSION OF VSP
1, ISOXABEN RESISTANT 1		 -0.69 0.3 -0.3
110 AT2G28910 CAX interacting protein 4 CAX interacting protein 4 0.69 0.36 -0.31
111 AT1G03090 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial /
3-methylcrotonyl-CoA carboxylase 1 (MCCA)		 MCCA 0.69 0.33 -0.31
112 AT4G39350 cellulose synthase A2 ATCESA2, ATH-A, cellulose synthase
A2		 -0.69 0.32 -0.33
113 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 0.69 0.32 -0.31
114 AT5G55730 FASCICLIN-like arabinogalactan 1 FASCICLIN-like arabinogalactan 1 -0.68 0.3 -0.32
115 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 -0.68 0.32 -0.31
116 AT3G24230 Pectate lyase family protein -0.68 0.33 -0.29
117 AT4G28210 embryo defective 1923 embryo defective 1923 -0.68 0.32 -0.3
118 AT1G26650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits
to 204 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.34 -0.31
119 AT1G65295 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G01015.1); Has 90 Blast hits to 90
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.68 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
120 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		0.74 0.42 -0.45 C0227
121 C0071 Cyanidin 3-O-[2''-O-(6'''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-(6''''-O-malonyl) glucoside - - - -0.73 0.42 -0.51
122 C0129 Kaempferol-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Kaempferol-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - kaempferol glucoside biosynthesis (Arabidopsis) -0.73 0.45 -0.43