AT3G45490 : -
Query Information
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AGICode AT3G45490
Description BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1); Has 99 Blast hits to 96 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G45490 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT2G25370.1); Has 99 Blast hits
to 96 proteins in 10 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 1 0.3 -0.34
2 AT4G05500 pseudogene, F-box protein family, AtFBL9/AtFBL23, contains
similarity to N7 protein GI:3273101 from (Medicago
truncatula); blastp match of 39% identity and 1.6e-34
P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein
{Medicago truncatula}		 -0.66 0.3 -0.31
3 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.64 0.31 -0.32
4 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein -0.64 0.31 -0.31
5 AT3G57680 Peptidase S41 family protein 0.63 0.33 -0.33
6 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 0.63 0.3 -0.3
7 AT1G70180 Sterile alpha motif (SAM) domain-containing protein -0.61 0.31 -0.32
8 AT5G11820 Plant self-incompatibility protein S1 family 0.61 0.34 -0.32
9 AT1G63420 Arabidopsis thaliana protein of unknown function (DUF821) 0.6 0.33 -0.31
10 AT2G33530 serine carboxypeptidase-like 46 serine carboxypeptidase-like 46 0.6 0.32 -0.31
11 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.33 -0.32
12 AT3G08960 ARM repeat superfamily protein -0.59 0.31 -0.32
13 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 -0.59 0.32 -0.33
14 AT3G29610 transposable element gene 0.59 0.33 -0.3
15 AT2G33520 unknown protein; Has 68 Blast hits to 68 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2;
Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.29 -0.31
16 AT1G23600 Domain of unknown function DUF220 0.58 0.31 -0.3
17 AT2G43650 Sas10/U3 ribonucleoprotein (Utp) family protein EMBRYO DEFECTIVE 2777 -0.58 0.29 -0.29
18 AT1G23280 MAK16 protein-related -0.57 0.32 -0.31
19 AT5G25960 Protein of Unknown Function (DUF239) -0.56 0.32 -0.31
20 AT5G13790 AGAMOUS-like 15 AGAMOUS-like 15 0.56 0.32 -0.31
21 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 0.56 0.33 -0.28
22 AT3G01220 homeobox protein 20 homeobox protein 20, homeobox
protein 20		 -0.56 0.32 -0.3
23 AT2G35540 DNAJ heat shock N-terminal domain-containing protein -0.56 0.33 -0.31
24 AT3G49310 Major facilitator superfamily protein -0.55 0.31 -0.32
25 AT3G28560 BCS1 AAA-type ATPase 0.55 0.32 -0.32
26 AT2G34320 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.55 0.32 -0.32
27 AT1G37080 transposable element gene 0.55 0.33 -0.32
28 AT3G52690 RNI-like superfamily protein -0.55 0.31 -0.3
29 AT3G15930 Pentatricopeptide repeat (PPR) superfamily protein -0.55 0.34 -0.31
30 AT3G29640 transposable element gene 0.55 0.31 -0.3
31 AT2G25340 vesicle-associated membrane protein 712 vesicle-associated membrane
protein 712, VAMP712,
vesicle-associated membrane
protein 712		 0.54 0.31 -0.32
32 AT4G08600 transposable element gene 0.54 0.33 -0.32
33 AT5G43790 Pentatricopeptide repeat (PPR) superfamily protein -0.53 0.32 -0.33
34 AT4G12220 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT4G12210.1); Has 24 Blast hits
to 21 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.34 -0.32
35 AT2G09840 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT2G06904.1); Has 10 Blast
hits to 10 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.53 0.32 -0.33
36 AT4G08430 Ulp1 protease family protein 0.53 0.31 -0.31
37 AT1G73310 serine carboxypeptidase-like 4 serine carboxypeptidase-like 4 -0.53 0.31 -0.34
38 AT2G14595 transposable element gene -0.52 0.31 -0.32
39 AT2G07430 transposable element gene 0.52 0.33 -0.33
40 AT2G27320 Protein of Unknown Function (DUF239) 0.51 0.32 -0.32
41 AT3G12380 actin-related protein 5 actin-related protein 5,
ACTIN-RELATED PROTEIN 5		 -0.51 0.31 -0.31
42 AT1G20840 tonoplast monosaccharide transporter1 AtTMT1, tonoplast monosaccharide
transporter1		 -0.51 0.31 -0.33
43 AT5G61280 Remorin family protein 0.51 0.32 -0.34
44 AT5G26630 MADS-box transcription factor family protein 0.51 0.31 -0.3
45 AT1G47620 cytochrome P450, family 96, subfamily A, polypeptide 8 cytochrome P450, family 96,
subfamily A, polypeptide 8		 0.5 0.32 -0.33
46 AT5G52290 shortage in chiasmata 1 SHORTAGE IN CHIASMATA 1 0.5 0.32 -0.33
47 AT1G43950 auxin response factor 23 auxin response factor 23 0.49 0.33 -0.3
48 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 0.49 0.31 -0.3
49 AT4G29550 Protein of unknown function (DUF626) 0.49 0.3 -0.32