AT3G45500 : -
Query Information
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AGICode AT3G45500
Description BEST Arabidopsis thaliana protein match is: RING/U-box protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has 48 Blast hits to 46 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G45500 BEST Arabidopsis thaliana protein match is: RING/U-box
protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has
48 Blast hits to 46 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 1 0.29 -0.31
2 AT1G68090 annexin 5 annexin 5, ANNEXIN ARABIDOPSIS
THALIANA 5		 -0.78 0.32 -0.3
3 AT4G38170 FAR1-related sequence 9 FAR1-related sequence 9 -0.77 0.29 -0.31
4 AT3G17290 transposable element gene -0.73 0.33 -0.29
5 AT3G44740 Class II aaRS and biotin synthetases superfamily protein -0.73 0.32 -0.32
6 AT1G76290 AMP-dependent synthetase and ligase family protein -0.72 0.32 -0.3
7 AT1G63640 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.72 0.32 -0.32
8 AT4G39930 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.69 0.31 -0.32
9 AT3G57970 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 0.69 0.32 -0.33
10 AT3G13820 F-box and associated interaction domains-containing protein -0.68 0.3 -0.33
11 AT3G20020 protein arginine methyltransferase 6 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 6,
protein arginine methyltransferase
6		 -0.68 0.31 -0.32
12 AT4G25980 Peroxidase superfamily protein -0.68 0.29 -0.3
13 AT5G30520 unknown protein; Has 50 Blast hits to 50 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.31 -0.29
14 AT2G10610 transposable element gene -0.68 0.31 -0.33
15 AT3G43120 SAUR-like auxin-responsive protein family -0.68 0.31 -0.32
16 AT5G61360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G07730.1); Has 20 Blast hits
to 20 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.67 0.32 -0.31
17 AT5G22420 fatty acid reductase 7 fatty acid reductase 7 0.67 0.32 -0.31
18 AT3G10810 zinc finger (C3HC4-type RING finger) family protein -0.67 0.32 -0.32
19 AT3G10590 Duplicated homeodomain-like superfamily protein 0.67 0.33 -0.34
20 AT3G32220 transposable element gene 0.67 0.32 -0.31
21 AT4G22700 LOB domain-containing protein 32 LOB domain-containing protein 32 -0.67 0.3 -0.31
22 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 -0.67 0.32 -0.29
23 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10		 -0.66 0.32 -0.33
24 AT4G00650 FRIGIDA-like protein FLOWERING LOCUS A, FRIGIDA -0.66 0.3 -0.31
25 AT2G02980 Pentatricopeptide repeat (PPR) superfamily protein ORGANELLE TRANSCRIPT PROCESSING 85 -0.66 0.32 -0.31
26 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein 0.66 0.34 -0.32
27 AT2G13230 transposable element gene 0.66 0.28 -0.33
28 AT4G30590 early nodulin-like protein 12 AtENODL12, early nodulin-like
protein 12		 -0.65 0.32 -0.32
29 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 -0.65 0.31 -0.32
30 AT1G77680 Ribonuclease II/R family protein -0.65 0.3 -0.32
31 AT3G01460 methyl-CPG-binding domain 9 ATMBD9, methyl-CPG-binding domain
9		 -0.65 0.31 -0.3
32 AT2G41550 Rho termination factor -0.65 0.31 -0.3
33 AT3G30570 transposable element gene -0.65 0.33 -0.32
34 AT1G61750 Receptor-like protein kinase-related family protein 0.64 0.31 -0.31
35 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 0.64 0.32 -0.31
36 AT3G19880 F-box and associated interaction domains-containing protein -0.64 0.32 -0.31
37 AT4G20200 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.64 0.3 -0.34
38 AT5G44510 target of AVRB operation1 target of AVRB operation1 -0.64 0.33 -0.32
39 AT3G44910 cation/H+ exchanger 12 ATCHX12, cation/H+ exchanger 12 -0.64 0.32 -0.3
40 AT1G17615 Disease resistance protein (TIR-NBS class) -0.64 0.31 -0.32
41 AT4G14670 casein lytic proteinase B2 casein lytic proteinase B2 -0.63 0.32 -0.31
42 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.32 -0.33
43 AT2G15880 Leucine-rich repeat (LRR) family protein 0.63 0.3 -0.31
44 AT5G40360 myb domain protein 115 myb domain protein 115, myb domain
protein 115		 -0.63 0.31 -0.33
45 AT1G32320 MAP kinase kinase 10 MAP kinase kinase 10, MAP kinase
kinase 10		 0.63 0.32 -0.32
46 AT4G08650 transposable element gene -0.63 0.32 -0.32
47 AT3G24680 transposable element gene -0.63 0.31 -0.32
48 AT1G10980 Lung seven transmembrane receptor family protein -0.63 0.3 -0.31
49 AT4G23090 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.31 -0.34
50 AT2G37430 C2H2 and C2HC zinc fingers superfamily protein 0.63 0.3 -0.33
51 AT2G44990 carotenoid cleavage dioxygenase 7 ATCCD7, carotenoid cleavage
dioxygenase 7, MAX3		 -0.63 0.33 -0.32
52 AT5G66640 DA1-related protein 3 DA1-related protein 3 0.63 0.32 -0.31
53 AT4G04980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast
hits to 15699 proteins in 1063 species: Archae - 116;
Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants -
3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI
BLink).		 -0.62 0.3 -0.33
54 AT2G37050 Leucine-rich repeat protein kinase family protein -0.62 0.3 -0.33
55 AT3G16020 F-box associated ubiquitination effector protein -0.62 0.32 -0.32
56 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.62 0.3 -0.32
57 AT2G41410 Calcium-binding EF-hand family protein 0.62 0.31 -0.33
58 AT2G34180 CBL-interacting protein kinase 13 WPL4-LIKE 2, CBL-interacting
protein kinase 13, SNF1-RELATED
PROTEIN KINASE 3.7, WPL4-LIKE 2		 0.62 0.32 -0.31
59 AT5G44530 Subtilase family protein -0.62 0.31 -0.35
60 AT1G34480 Cysteine/Histidine-rich C1 domain family protein -0.62 0.3 -0.32
61 AT5G38770 glutamine dumper 7 glutamine dumper 7, glutamine
dumper 7		 -0.62 0.32 -0.33
62 AT3G42220 transposable element gene -0.62 0.32 -0.32
63 AT1G22670 Protease-associated (PA) RING/U-box zinc finger family
protein		 -0.62 0.31 -0.3
64 AT5G35160 Endomembrane protein 70 protein family -0.61 0.34 -0.31
65 AT2G33870 RAB GTPase homolog A1H RAB GTPase homolog A1H -0.61 0.32 -0.33
66 AT1G53210 sodium/calcium exchanger family protein / calcium-binding
EF hand family protein		 -0.61 0.32 -0.32
67 AT1G80420 BRCT domain-containing DNA repair protein ATXRCC1 0.61 0.33 -0.32
68 AT1G49100 Leucine-rich repeat protein kinase family protein 0.61 0.34 -0.31
69 AT1G74220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, flower, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast
hits to 347 proteins in 86 species: Archae - 0; Bacteria -
17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2;
Other Eukaryotes - 136 (source: NCBI BLink).		 0.61 0.31 -0.31
70 AT2G23740 nucleic acid binding;sequence-specific DNA binding
transcription factors;zinc ion binding		 -0.61 0.31 -0.34
71 AT5G01190 laccase 10 laccase 10 -0.61 0.32 -0.31
72 AT4G13060 F-box associated ubiquitination effector family protein -0.61 0.31 -0.32
73 AT5G25440 Protein kinase superfamily protein 0.61 0.33 -0.3
74 AT3G11240 arginine-tRNA protein transferase 2 ATATE2, arginine-tRNA protein
transferase 2		 -0.61 0.31 -0.32
75 AT1G04880 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 -0.61 0.32 -0.32
76 AT2G11090 transposable element gene -0.61 0.32 -0.32
77 AT1G28270 ralf-like 4 ralf-like 4 -0.61 0.31 -0.31
78 AT3G48940 Remorin family protein -0.6 0.3 -0.29
79 AT5G52870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 5		 0.6 0.32 -0.29
80 AT4G37740 growth-regulating factor 2 growth-regulating factor 2,
growth-regulating factor 2		 -0.6 0.29 -0.32
81 AT2G23040 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.3 -0.32
82 AT5G27080 Transducin family protein / WD-40 repeat family protein AtCDC20.3, cell division cycle
20.3		 -0.6 0.31 -0.32
83 AT2G40680 transposable element gene -0.6 0.31 -0.33
84 AT5G44330 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.33 -0.31
85 AT3G28260 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.6 0.32 -0.3
86 AT3G12440 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.6 0.3 -0.32
87 AT4G10490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.6 0.32 -0.33
88 AT5G39870 Protein of unknown function (DUF1216) -0.6 0.33 -0.31
89 AT1G65110 Ubiquitin carboxyl-terminal hydrolase-related protein 0.6 0.31 -0.29
90 AT4G11760 low-molecular-weight cysteine-rich 17 low-molecular-weight cysteine-rich
17		 -0.6 0.31 -0.32
91 AT3G61940 Cation efflux family protein ATMTPA1, MTPA1 -0.6 0.3 -0.29
92 AT1G22510 RING/U-box protein with domain of unknown function (DUF
1232)		 0.6 0.32 -0.3
93 AT5G39420 CDC2C CDC2C 0.6 0.3 -0.34
94 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 0.6 0.32 -0.32
95 AT2G29780 Galactose oxidase/kelch repeat superfamily protein -0.6 0.32 -0.31
96 AT4G11940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11930.1); Has 37 Blast hits
to 37 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.27
97 AT1G63070 pentatricopeptide (PPR) repeat-containing protein 0.6 0.31 -0.31
98 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein -0.6 0.34 -0.33
99 AT5G04500 glycosyltransferase family protein 47 -0.59 0.31 -0.34
100 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.59 0.32 -0.31
101 AT1G26170 ARM repeat superfamily protein -0.59 0.32 -0.3
102 AT4G15730 CW-type Zinc Finger -0.59 0.33 -0.3
103 AT3G44210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits
to 15 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.32 -0.3
104 AT1G28640 GDSL-like Lipase/Acylhydrolase superfamily protein -0.59 0.34 -0.31
105 AT5G43800 transposable element gene -0.59 0.3 -0.31
106 AT4G18080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plant-type cell wall; EXPRESSED IN: stem; BEST Arabidopsis
thaliana protein match is: Protein of unknown function
(DUF1184) (TAIR:AT3G27900.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.32 -0.32
107 AT1G16910 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 8 0.59 0.33 -0.32
108 AT3G60120 beta glucosidase 27 beta glucosidase 27 0.59 0.33 -0.31
109 AT3G10120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits
to 57 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.32 -0.32
110 AT3G17310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AtDRM3, domains rearranged
methyltransferase 3		 -0.58 0.3 -0.31
111 AT5G50750 reversibly glycosylated polypeptide 4 reversibly glycosylated
polypeptide 4		 0.58 0.32 -0.32
112 AT3G57460 catalytics;metal ion binding 0.58 0.32 -0.34
113 AT3G04200 RmlC-like cupins superfamily protein -0.58 0.32 -0.32
114 AT1G01280 cytochrome P450, family 703, subfamily A, polypeptide 2 CYP703, cytochrome P450, family
703, subfamily A, polypeptide 2		 -0.58 0.31 -0.33
115 AT3G15130 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.29 -0.31
116 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.58 0.29 -0.33
117 AT1G50310 sugar transporter 9 SUGAR TRANSPORTER 9, sugar
transporter 9		 -0.58 0.31 -0.33
118 AT2G02700 Cysteine/Histidine-rich C1 domain family protein 0.58 0.32 -0.34
119 AT1G27990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits
to 86 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.58 0.34 -0.28
120 AT3G59730 Concanavalin A-like lectin protein kinase family protein 0.58 0.3 -0.32
121 AT1G34590 transposable element gene -0.58 0.32 -0.36
122 AT2G20330 Transducin/WD40 repeat-like superfamily protein 0.57 0.34 -0.32
123 AT3G61340 F-box and associated interaction domains-containing protein 0.57 0.32 -0.31
124 AT5G08230 Tudor/PWWP/MBT domain-containing protein 0.57 0.32 -0.31
125 AT5G43530 Helicase protein with RING/U-box domain 0.57 0.31 -0.32
126 AT2G04000 transposable element gene 0.56 0.36 -0.33
127 AT4G25610 C2H2-like zinc finger protein 0.56 0.32 -0.33
128 AT1G08170 Histone superfamily protein 0.56 0.29 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
129 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - 0.66 0.46 -0.45 C0023