AT3G45630 : -
Query Information
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AGICode AT3G45630
Description RNA binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein 1 0.33 -0.29
2 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 0.79 0.31 -0.33
3 AT1G49150 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.74 0.33 -0.3
4 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 0.74 0.32 -0.33
5 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 -0.72 0.34 -0.32
6 AT2G17110 Protein of unknown function (DUF630 and DUF632) 0.71 0.32 -0.31
7 AT3G24340 chromatin remodeling 40 chromatin remodeling 40 0.71 0.31 -0.34
8 AT5G57410 Afadin/alpha-actinin-binding protein -0.71 0.33 -0.34
9 AT2G05200 transposable element gene 0.7 0.33 -0.33
10 AT2G16210 Transcriptional factor B3 family protein 0.7 0.31 -0.31
11 AT3G10240 F-box and associated interaction domains-containing protein 0.69 0.31 -0.32
12 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.69 0.33 -0.33
13 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 0.69 0.33 -0.32
14 AT4G16280 RNA binding;abscisic acid binding FCA 0.69 0.32 -0.3
15 AT4G14550 indole-3-acetic acid inducible 14 indole-3-acetic acid inducible 14,
SOLITARY ROOT		 -0.69 0.32 -0.32
16 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 -0.69 0.32 -0.33
17 AT5G61140 U5 small nuclear ribonucleoprotein helicase 0.68 0.32 -0.32
18 AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 0.68 0.3 -0.32
19 AT1G11260 sugar transporter 1 SUGAR TRANSPORTER 1, sugar
transporter 1		 -0.68 0.33 -0.32
20 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.68 0.31 -0.34
21 AT5G12460 Protein of unknown function (DUF604) 0.67 0.29 -0.3
22 AT2G19700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.34 -0.31
23 AT2G03320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.33 -0.33
24 AT3G61390 RING/U-box superfamily protein 0.67 0.32 -0.31
25 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.32 -0.31
26 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 0.66 0.33 -0.31
27 AT3G42690 transposable element gene 0.66 0.32 -0.32
28 AT3G51520 diacylglycerol acyltransferase family -0.66 0.33 -0.33
29 AT2G39520 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.3 -0.31
30 AT4G32920 glycine-rich protein 0.66 0.34 -0.32
31 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 0.66 0.32 -0.33
32 AT2G01130 DEA(D/H)-box RNA helicase family protein 0.65 0.34 -0.3
33 AT2G31780 RING/U-box superfamily protein ARIADNE 11, ARABIDOPSIS ARIADNE 11 0.65 0.3 -0.33
34 AT4G04560 transposable element gene -0.65 0.3 -0.31
35 AT5G05670 signal recognition particle binding -0.65 0.31 -0.31
36 AT5G20170 RNA polymerase II transcription mediators 0.65 0.32 -0.32
37 AT5G35880 transposable element gene -0.65 0.3 -0.31
38 AT3G56230 BTB/POZ domain-containing protein -0.64 0.31 -0.29
39 AT2G20880 Integrase-type DNA-binding superfamily protein AtERF53, ERF domain 53 0.64 0.31 -0.32
40 AT2G48160 Tudor/PWWP/MBT domain-containing protein 0.64 0.3 -0.3
41 AT3G63180 TIC-like TICKLE, TIC-like 0.64 0.33 -0.31
42 AT5G28590 DNA-binding family protein 0.64 0.31 -0.3
43 AT3G21400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; Has 29 Blast hits to 29 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants -
27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.33 -0.3
44 AT5G44970 Protein with RNI-like/FBD-like domains 0.64 0.3 -0.3
45 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.64 0.29 -0.31
46 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein 0.64 0.34 -0.31
47 AT3G43760 transposable element gene 0.64 0.29 -0.31
48 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.32 -0.33
49 AT3G62640 Protein of unknown function (DUF3511) 0.63 0.31 -0.32
50 AT3G32110 transposable element gene 0.63 0.31 -0.31
51 AT1G44414 unknown protein; Has 29 Blast hits to 29 proteins in 12
species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.29 -0.3
52 AT1G20180 Protein of unknown function (DUF677) 0.63 0.32 -0.31
53 AT4G09540 transposable element gene -0.63 0.33 -0.32
54 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.62 0.31 -0.32
55 AT3G07880 Immunoglobulin E-set superfamily protein SUPERCENTIPEDE1 -0.62 0.32 -0.32
56 AT4G27300 S-locus lectin protein kinase family protein 0.62 0.3 -0.31
57 AT3G12660 FASCICLIN-like arabinogalactan protein 14 precursor FASCICLIN-like arabinogalactan
protein 14 precursor		 0.62 0.33 -0.32
58 AT3G63470 serine carboxypeptidase-like 40 serine carboxypeptidase-like 40 -0.62 0.31 -0.31
59 AT3G32940 RNA-binding KH domain-containing protein 0.62 0.32 -0.31
60 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3		 0.62 0.32 -0.32
61 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1		 0.62 0.31 -0.31
62 AT1G36600 transposable element gene 0.62 0.29 -0.3
63 AT5G17070 CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core
regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.32 -0.28
64 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 0.62 0.32 -0.31
65 AT1G09940 Glutamyl-tRNA reductase family protein HEMA2 0.62 0.3 -0.3
66 AT4G11950 Protein of unknown function (DUF1191) 0.62 0.32 -0.32
67 AT4G31610 Transcriptional factor B3 family protein REPRODUCTIVE MERISTEM 1,
REPRODUCTIVE MERISTEM 1		 0.61 0.3 -0.32
68 AT1G50470 F-box associated ubiquitination effector family protein 0.61 0.32 -0.31
69 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 -0.61 0.34 -0.31
70 AT1G13200 F-box and associated interaction domains-containing protein 0.61 0.33 -0.32
71 AT1G13540 Protein of unknown function (DUF1262) -0.61 0.31 -0.3
72 AT3G56890 F-box associated ubiquitination effector family protein 0.61 0.32 -0.31
73 AT1G24060 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.33 -0.34
74 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein 0.6 0.31 -0.32
75 AT3G11500 Small nuclear ribonucleoprotein family protein -0.6 0.32 -0.32
76 AT1G26350 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.34 -0.31
77 AT1G62260 mitochondrial editing factor 9 mitochondrial editing factor 9 0.6 0.33 -0.32
78 AT4G34500 Protein kinase superfamily protein -0.6 0.32 -0.32
79 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 0.6 0.31 -0.33
80 AT1G28570 SGNH hydrolase-type esterase superfamily protein 0.6 0.34 -0.31
81 AT1G61800 glucose-6-phosphate/phosphate translocator 2 ARABIDOPSIS
GLUCOSE-6-PHOSPHATE/PHOSPHATE
TRANSLOCATOR 2,
glucose-6-phosphate/phosphate
translocator 2		 0.6 0.3 -0.3
82 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 -0.6 0.31 -0.33
83 AT5G51910 TCP family transcription factor -0.6 0.3 -0.32
84 AT5G24010 Protein kinase superfamily protein 0.6 0.31 -0.31
85 AT1G13830 Carbohydrate-binding X8 domain superfamily protein 0.6 0.32 -0.31
86 AT1G77300 histone methyltransferases(H3-K4 specific);histone
methyltransferases(H3-K36 specific)		 ASH1 HOMOLOG 2, CAROTENOID
CHLOROPLAST REGULATORY1, EARLY
FLOWERING IN SHORT DAYS, LAZARUS
2, SET DOMAIN GROUP 8		 0.6 0.31 -0.31
87 AT5G47360 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.32 -0.3
88 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.6 0.31 -0.31
89 AT2G25740 ATP-dependent protease La (LON) domain protein 0.6 0.33 -0.31
90 AT4G22650 CONTAINS InterPro DOMAIN/s: Plant lipid transfer
protein/seed storage/trypsin-alpha amylase inhibitor
(InterPro:IPR003612); BEST Arabidopsis thaliana protein
match is: Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein
(TAIR:AT4G22640.1); Has 25 Blast hits to 25 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.29 -0.33
91 AT1G26820 ribonuclease 3 ribonuclease 3 -0.59 0.32 -0.32
92 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.33
93 AT3G53150 UDP-glucosyl transferase 73D1 UDP-glucosyl transferase 73D1 -0.59 0.29 -0.33
94 AT1G41797 transposable element gene -0.59 0.31 -0.31
95 AT1G13670 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.31
96 AT5G46200 Protein of Unknown Function (DUF239) -0.58 0.3 -0.34
97 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.58 0.31 -0.33
98 AT5G46115 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.35 -0.31
99 AT3G05520 Subunits of heterodimeric actin filament capping protein
Capz superfamily		 -0.58 0.31 -0.3
100 AT5G63620 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.58 0.29 -0.31
101 AT2G29050 RHOMBOID-like 1 RHOMBOID-like 1, RHOMBOID-like 1 -0.58 0.32 -0.32
102 AT1G29600 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.58 0.32 -0.32
103 AT5G30480 transposable element gene -0.57 0.31 -0.31
104 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.32 -0.31
105 AT5G63480 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.57 0.29 -0.32
106 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 -0.57 0.33 -0.32
107 AT5G15890 TRICHOME BIREFRINGENCE-LIKE 21 TRICHOME BIREFRINGENCE-LIKE 21 -0.57 0.32 -0.3
108 AT3G57860 UV-B-insensitive 4-like GIGAS CELL 1, OMISSION OF SECOND
DIVISION, UV-B-insensitive 4-like		 -0.57 0.31 -0.33
109 AT1G76220 Arabidopsis protein of unknown function (DUF241) -0.57 0.3 -0.32
110 AT3G12170 Chaperone DnaJ-domain superfamily protein -0.57 0.31 -0.33
111 AT1G13610 alpha/beta-Hydrolases superfamily protein -0.57 0.34 -0.3
112 AT4G37780 myb domain protein 87 ATMYB87, myb domain protein 87 -0.57 0.35 -0.31
113 AT1G04700 PB1 domain-containing protein tyrosine kinase -0.56 0.31 -0.3
114 AT5G43830 Aluminium induced protein with YGL and LRDR motifs -0.56 0.3 -0.31
115 AT3G52130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.56 0.32 -0.3
116 AT4G17000 unknown protein; Has 2862 Blast hits to 2331 proteins in
349 species: Archae - 6; Bacteria - 408; Metazoa - 833;
Fungi - 223; Plants - 134; Viruses - 7; Other Eukaryotes -
1251 (source: NCBI BLink).		 -0.56 0.31 -0.33
117 AT2G24840 AGAMOUS-like 61 AGAMOUS-like 61, DIANA -0.56 0.33 -0.32
118 AT1G31760 SWIB/MDM2 domain superfamily protein -0.56 0.32 -0.31
119 AT5G06650 C2H2 and C2HC zinc fingers superfamily protein GLABROUS INFLORESCENCE STEMS 2 -0.56 0.3 -0.32
120 AT1G35780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78150.2); Has 145 Blast hits
to 144 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.32 -0.32
121 AT1G03540 Pentatricopeptide repeat (PPR-like) superfamily protein -0.56 0.32 -0.31
122 AT1G61070 low-molecular-weight cysteine-rich 66 low-molecular-weight cysteine-rich
66, PLANT DEFENSIN 2.4		 -0.56 0.31 -0.3
123 AT5G04200 metacaspase 9 metacaspase 9, metacaspase 2f,
metacaspase 9, metacaspase 2f		 -0.55 0.33 -0.35
124 AT1G36940 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.33 -0.31
125 AT5G48655 RING/U-box superfamily protein -0.55 0.3 -0.34
126 AT3G19610 Plant protein of unknown function (DUF936) -0.55 0.31 -0.34
127 AT2G46000 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Mesoderm development candidate 2 (InterPro:IPR019330); Has
31 Blast hits to 31 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.3 -0.31