AGICode | AT3G45050 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G45050 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.31 | -0.31 | |||
2 | AT3G60370 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.93 | 0.3 | -0.33 | |||
3 | AT1G07320 | ribosomal protein L4 | EMBRYO DEFECTIVE 2784, ribosomal protein L4 |
0.91 | 0.31 | -0.31 | ||
4 | AT4G18370 | DEGP protease 5 | DEGP protease 5, DEGP PROTEASE 5, PROTEASE HHOA PRECUSOR |
0.91 | 0.3 | -0.33 | ||
5 | AT1G48350 | Ribosomal L18p/L5e family protein | EMBRYO DEFECTIVE 3105 | 0.91 | 0.33 | -0.32 | ||
6 | AT3G62910 | Peptide chain release factor 1 | ALBINO AND PALE GREEN | 0.91 | 0.32 | -0.3 | ||
7 | AT5G47190 | Ribosomal protein L19 family protein | 0.91 | 0.31 | -0.31 | |||
8 | AT1G05190 | Ribosomal protein L6 family | embryo defective 2394 | 0.91 | 0.33 | -0.34 | ||
9 | AT5G16140 | Peptidyl-tRNA hydrolase family protein | 0.91 | 0.33 | -0.31 | |||
10 | AT3G14110 | Tetratricopeptide repeat (TPR)-like superfamily protein | FLUORESCENT IN BLUE LIGHT | 0.91 | 0.32 | -0.32 | ||
11 | AT1G32990 | plastid ribosomal protein l11 | plastid ribosomal protein l11 | 0.9 | 0.32 | -0.31 | ||
12 | AT1G73110 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.9 | 0.31 | -0.33 | |||
13 | AT1G32470 | Single hybrid motif superfamily protein | 0.9 | 0.31 | -0.32 | |||
14 | AT5G14320 | Ribosomal protein S13/S18 family | EMBRYO DEFECTIVE 3137 | 0.9 | 0.32 | -0.32 | ||
15 | AT4G10300 | RmlC-like cupins superfamily protein | 0.9 | 0.32 | -0.31 | |||
16 | AT5G52960 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.89 | 0.31 | -0.32 | |||
17 | AT1G01080 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.89 | 0.33 | -0.33 | |||
18 | AT3G55040 | glutathione transferase lambda 2 | glutathione transferase lambda 2 | 0.89 | 0.3 | -0.3 | ||
19 | AT2G40690 | NAD-dependent glycerol-3-phosphate dehydrogenase family protein |
GLY1, SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1 |
0.89 | 0.31 | -0.31 | ||
20 | AT5G14910 | Heavy metal transport/detoxification superfamily protein | 0.89 | 0.31 | -0.3 | |||
21 | AT1G67700 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
0.89 | 0.29 | -0.32 | |||
22 | AT1G14270 | CAAX amino terminal protease family protein | 0.89 | 0.32 | -0.3 | |||
23 | AT1G64510 | Translation elongation factor EF1B/ribosomal protein S6 family protein |
0.89 | 0.33 | -0.33 | |||
24 | AT4G17560 | Ribosomal protein L19 family protein | 0.88 | 0.33 | -0.33 | |||
25 | AT4G38490 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.88 | 0.32 | -0.32 | |||
26 | AT1G11430 | plastid developmental protein DAG, putative | 0.88 | 0.31 | -0.33 | |||
27 | AT4G25050 | acyl carrier protein 4 | acyl carrier protein 4 | 0.88 | 0.31 | -0.34 | ||
28 | AT2G43560 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.88 | 0.33 | -0.3 | |||
29 | AT1G33040 | nascent polypeptide-associated complex subunit alpha-like protein 5 |
nascent polypeptide-associated complex subunit alpha-like protein 5 |
0.88 | 0.32 | -0.33 | ||
30 | AT1G03475 | Coproporphyrinogen III oxidase | ATCPO-I, HEMF1, LESION INITIATION 2 |
0.88 | 0.32 | -0.32 | ||
31 | AT4G34190 | stress enhanced protein 1 | stress enhanced protein 1 | 0.88 | 0.31 | -0.33 | ||
32 | AT3G25805 | unknown protein; Has 98 Blast hits to 98 proteins in 45 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.88 | 0.32 | -0.32 | |||
33 | AT1G55480 | protein containing PDZ domain, a K-box domain, and a TPR region |
protein containing PDZ domain, a K-box domain, and a TPR region |
0.88 | 0.33 | -0.31 | ||
34 | AT5G51100 | Fe superoxide dismutase 2 | Fe superoxide dismutase 2 | 0.88 | 0.31 | -0.29 | ||
35 | AT4G39620 | Tetratricopeptide repeat (TPR)-like superfamily protein | A. THALIANA PENTATRICOPEPTIDE REPEAT 5, EMBRYO DEFECTIVE 2453 |
0.88 | 0.33 | -0.32 | ||
36 | AT1G76450 | Photosystem II reaction center PsbP family protein | 0.87 | 0.31 | -0.36 | |||
37 | AT5G24165 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.87 | 0.32 | -0.33 | |||
38 | AT3G62030 | rotamase CYP 4 | cyclophilin 20-3, rotamase CYP 4 | 0.87 | 0.31 | -0.32 | ||
39 | AT1G64770 | NDH-dependent cyclic electron flow 1 | NDH-dependent cyclic electron flow 1, NAD(P)H DEHYDROGENASE SUBUNIT 45, Photosynthetic NDH subcomplex B 2 |
0.87 | 0.32 | -0.33 | ||
40 | AT3G06730 | Thioredoxin z | thioredoxin putative plastidic, Thioredoxin z |
0.87 | 0.33 | -0.32 | ||
41 | AT3G25660 | Amidase family protein | 0.87 | 0.33 | -0.32 | |||
42 | AT3G59980 | Nucleic acid-binding, OB-fold-like protein | 0.87 | 0.32 | -0.3 | |||
43 | AT2G29360 | NAD(P)-binding Rossmann-fold superfamily protein | 0.87 | 0.32 | -0.29 | |||
44 | AT5G38290 | Peptidyl-tRNA hydrolase family protein | 0.87 | 0.3 | -0.32 | |||
45 | AT1G73655 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.87 | 0.31 | -0.33 | |||
46 | AT3G53130 | Cytochrome P450 superfamily protein | CYTOCHROME P450 97C1, LUTEIN DEFICIENT 1 |
0.87 | 0.31 | -0.31 | ||
47 | AT3G15850 | fatty acid desaturase 5 | ADS3, fatty acid desaturase 5, FATTY ACID DESATURASE B, JB67 |
0.86 | 0.3 | -0.35 | ||
48 | AT1G62780 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
0.86 | 0.32 | -0.3 | |||
49 | AT4G35450 | ankyrin repeat-containing protein 2 | AFT, ankyrin repeat-containing protein 2, AKR2A |
0.86 | 0.31 | -0.32 | ||
50 | AT3G20250 | pumilio 5 | pumilio 5, pumilio 5 | -0.86 | 0.32 | -0.31 | ||
51 | AT4G16410 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF751 (InterPro:IPR008470); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.86 | 0.31 | -0.3 | |||
52 | AT1G04640 | lipoyltransferase 2 | lipoyltransferase 2 | 0.86 | 0.3 | -0.34 | ||
53 | AT5G02120 | one helix protein | one helix protein, PIGMENT DEFECTIVE 335 |
0.86 | 0.32 | -0.3 | ||
54 | AT4G28210 | embryo defective 1923 | embryo defective 1923 | 0.86 | 0.31 | -0.32 | ||
55 | AT1G36390 | Co-chaperone GrpE family protein | 0.86 | 0.3 | -0.32 | |||
56 | AT4G28660 | photosystem II reaction center PSB28 protein | photosystem II reaction center PSB28 protein |
0.86 | 0.32 | -0.31 | ||
57 | AT3G53900 | uracil phosphoribosyltransferase | PYRIMIDINE R, uracil phosphoribosyltransferase |
0.86 | 0.31 | -0.3 | ||
58 | AT1G51100 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.86 | 0.32 | -0.32 | |||
59 | AT2G02500 | Nucleotide-diphospho-sugar transferases superfamily protein | ATMEPCT, ISPD, 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLTRANSFERASE |
0.86 | 0.31 | -0.34 | ||
60 | AT4G39970 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.85 | 0.29 | -0.3 | |||
61 | AT1G76405 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20816.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.85 | 0.32 | -0.3 | |||
62 | AT4G27600 | pfkB-like carbohydrate kinase family protein | GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 |
0.85 | 0.33 | -0.34 | ||
63 | AT1G10960 | ferredoxin 1 | ferredoxin 1, ferredoxin 1 | 0.85 | 0.3 | -0.3 | ||
64 | AT1G16080 | unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
0.85 | 0.33 | -0.33 | |||
65 | AT2G17972 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.85 | 0.29 | -0.31 | |||
66 | AT4G24770 | 31-kDa RNA binding protein | ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD, ATRBP33, CP31, 31-kDa RNA binding protein |
0.85 | 0.32 | -0.33 | ||
67 | AT5G20630 | germin 3 | ARABIDOPSIS THALIANA GERMIN 3, germin 3, GERMIN-LIKE PROTEIN 3, GLP3A, GLP3B |
0.85 | 0.3 | -0.3 | ||
68 | AT3G63410 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
ALBINO OR PALE GREEN MUTANT 1, E37, INNER ENVELOPE PROTEIN 37, VITAMIN E DEFECTIVE 3 |
0.85 | 0.33 | -0.31 | ||
69 | AT2G32500 | Stress responsive alpha-beta barrel domain protein | 0.85 | 0.31 | -0.3 | |||
70 | AT2G42890 | MEI2-like 2 | MEI2-like 2, MEI2-like 2 | -0.83 | 0.29 | -0.32 | ||
71 | AT2G39350 | ABC-2 type transporter family protein | ATP-binding cassette G1 | -0.82 | 0.33 | -0.35 | ||
72 | AT5G66170 | sulfurtransferase 18 | sulfurtransferase 18 | -0.81 | 0.31 | -0.33 | ||
73 | AT2G16720 | myb domain protein 7 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7, ATY49, myb domain protein 7 |
-0.8 | 0.33 | -0.3 | ||
74 | AT5G02170 | Transmembrane amino acid transporter family protein | -0.79 | 0.33 | -0.32 | |||
75 | AT5G24090 | chitinase A | chitinase A, chitinase A | -0.77 | 0.34 | -0.3 | ||
76 | AT5G28510 | beta glucosidase 24 | beta glucosidase 24 | -0.77 | 0.32 | -0.3 | ||
77 | AT1G03080 | kinase interacting (KIP1-like) family protein | -0.77 | 0.31 | -0.34 | |||
78 | AT5G16680 | RING/FYVE/PHD zinc finger superfamily protein | -0.77 | 0.33 | -0.34 | |||
79 | AT1G77000 | RNI-like superfamily protein | ARABIDOPSIS HOMOLOG OF HOMOLOG OF HUMAN SKP2 2, SKP2B |
-0.77 | 0.31 | -0.31 | ||
80 | AT3G16340 | pleiotropic drug resistance 1 | ATP-binding cassette G29, PLEIOTROPIC DRUG RESISTANCE 1, pleiotropic drug resistance 1 |
-0.76 | 0.33 | -0.32 | ||
81 | AT1G63440 | heavy metal atpase 5 | heavy metal atpase 5 | -0.76 | 0.3 | -0.32 | ||
82 | AT5G67340 | ARM repeat superfamily protein | -0.76 | 0.33 | -0.34 | |||
83 | AT2G28110 | Exostosin family protein | FRAGILE FIBER 8, IRREGULAR XYLEM 7 | -0.75 | 0.31 | -0.31 | ||
84 | AT1G07510 | FTSH protease 10 | FTSH protease 10 | -0.73 | 0.33 | -0.32 | ||
85 | AT1G10480 | zinc finger protein 5 | zinc finger protein 5 | -0.73 | 0.32 | -0.33 | ||
86 | AT3G62590 | alpha/beta-Hydrolases superfamily protein | -0.73 | 0.32 | -0.3 | |||
87 | AT5G13010 | RNA helicase family protein | embryo defective 3011 | -0.72 | 0.32 | -0.33 | ||
88 | AT5G63930 | Leucine-rich repeat protein kinase family protein | -0.72 | 0.31 | -0.3 | |||
89 | AT4G34860 | Plant neutral invertase family protein | alkaline/neutral invertase B | -0.71 | 0.31 | -0.31 | ||
90 | AT1G08620 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
PKDM7D | -0.71 | 0.33 | -0.33 | ||
91 | AT1G66950 | pleiotropic drug resistance 11 | ATP-binding cassette G39, PLEIOTROPIC DRUG RESISTANCE 11, pleiotropic drug resistance 11 |
-0.71 | 0.32 | -0.3 | ||
92 | AT1G48370 | YELLOW STRIPE like 8 | YELLOW STRIPE like 8 | -0.71 | 0.31 | -0.33 | ||
93 | AT2G25940 | alpha-vacuolar processing enzyme | alpha-vacuolar processing enzyme, ALPHAVPE |
-0.71 | 0.33 | -0.3 | ||
94 | AT1G05340 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast hits to 189 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 21; Plants - 168; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.3 | -0.33 | |||
95 | AT4G21980 | Ubiquitin-like superfamily protein | AUTOPHAGY 8A, AUTOPHAGY-RELATED 8A | -0.7 | 0.3 | -0.31 | ||
96 | AT5G24600 | Protein of unknown function, DUF599 | -0.7 | 0.32 | -0.3 | |||
97 | AT2G11520 | calmodulin-binding receptor-like cytoplasmic kinase 3 | calmodulin-binding receptor-like cytoplasmic kinase 3 |
-0.7 | 0.32 | -0.3 | ||
98 | AT5G65660 | hydroxyproline-rich glycoprotein family protein | -0.69 | 0.3 | -0.32 | |||
99 | AT4G29940 | pathogenesis related homeodomain protein A | pathogenesis related homeodomain protein A |
-0.69 | 0.31 | -0.31 | ||
100 | AT4G11670 | Protein of unknown function (DUF810) | -0.69 | 0.3 | -0.32 | |||
101 | AT5G50780 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
-0.68 | 0.31 | -0.31 | |||
102 | AT1G23230 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
-0.68 | 0.29 | -0.31 | |||
103 | AT2G41850 | polygalacturonase abscission zone A. thaliana | ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2, polygalacturonase abscission zone A. thaliana |
-0.68 | 0.33 | -0.31 | ||
104 | AT1G69360 | Plant protein of unknown function (DUF863) | -0.68 | 0.31 | -0.3 | |||
105 | AT3G16857 | response regulator 1 | response regulator 1, response regulator 1 |
-0.68 | 0.33 | -0.33 | ||
106 | AT1G78610 | mechanosensitive channel of small conductance-like 6 | mechanosensitive channel of small conductance-like 6 |
-0.68 | 0.31 | -0.32 |